Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H21
(934 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 33 0.43
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 32 0.75
03_06_0471 + 34169562-34169892,34170121-34170347 31 0.99
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 31 1.7
12_02_0299 - 17051570-17052474,17053542-17053755 30 2.3
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 2.3
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 29 5.3
02_04_0382 - 22501041-22501279,22501717-22501810 29 5.3
03_01_0526 + 3956909-3957071,3957262-3957317,3957398-3957462,395... 29 7.0
02_05_0686 - 30900748-30902167,30903442-30904742 29 7.0
10_08_0608 + 19184722-19185224,19185331-19185410,19186048-191862... 28 9.2
>05_05_0156 + 22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 32.7 bits (71), Expect = 0.43
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -1
Query: 232 AVSIRVVVFGRINDVRAVVNRFVAVSLSVGHSQQSEDENHEEFHFYMITSYHRRKY*RGA 53
A I +++G ++D ++F+ +S QS+DEN + H + +YH +K G+
Sbjct: 985 ACDIIRILYGEVHDHSPFDDKFLPLSFDAQIDSQSDDENDKSGHGRIKGNYHSKKEVYGS 1044
Query: 52 QK 47
+
Sbjct: 1045 MR 1046
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.9 bits (69), Expect = 0.75
Identities = 21/82 (25%), Positives = 21/82 (25%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXX 785
PP G P G P F PP PPP PP
Sbjct: 32 PPQQPAYGHMP---PPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQM 88
Query: 786 XXXXXXPPPPXGXXXXXXXXPP 851
PPPP G PP
Sbjct: 89 YYQPPPPPPPYGVNSSQPPPPP 110
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 31.5 bits (68), Expect = 0.99
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = +2
Query: 164 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 313
Y P P PP Y P+ GY P GAY +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 164 YEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFKPTPFPGARG 322
Y P + P V PP Y P +G P N + Y + P GRP P P GA G
Sbjct: 394 YAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.3 bits (65), Expect = 2.3
Identities = 25/108 (23%), Positives = 25/108 (23%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXX 785
PP P P F P F PP PPP P P
Sbjct: 227 PPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAF--PFPLPPWPWAPPPAFPFPHLPPIF 284
Query: 786 XXXXXXPPPPXGXXXXXXXXPPXXXXPXXXXXXPXXXXXXPXXLXPXP 929
PPPP PP P P P P P
Sbjct: 285 SPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPP 332
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 152 QGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 307
QG Y+P R PP+ P Y P G Y +PQG+PY P P+
Sbjct: 246 QGETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 617 GGGGGPXXPKXXXXXGXQXPPPKGXXPXPG 528
GGGGG P G PPP G P PG
Sbjct: 30 GGGGGGGAPPYRPASGFVWPPP-GMTPRPG 58
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.1 bits (62), Expect = 5.3
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 107 FFMIFVLALLAMAN-AQGNGYEPIDNRPYIVNPPK----DYNPNGNGYEPIDNGAYYVDR 271
F ++ A +A A +G P ++ + PP D P+ + Y+P + YY D
Sbjct: 16 FALLLAAAFVASAEQTHDDGDNPPESPDHEDPPPSPEYYDPPPSPDYYDPPHSPDYY-DP 74
Query: 272 PQGRPYFKPTPFPGARGG 325
P Y+ P P P GG
Sbjct: 75 PPSPDYYDPPPSPYYGGG 92
>03_01_0526 +
3956909-3957071,3957262-3957317,3957398-3957462,
3957560-3958006,3958102-3958227,3958328-3958511,
3958788-3958943
Length = 398
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPP 716
PP PK K F PP PPP PP
Sbjct: 118 PPKPKAAAKKRFQDDSENQDPALATPPPPPPAASRPP 154
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/57 (26%), Positives = 15/57 (26%)
Frame = +3
Query: 681 PPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXXXXXXXXPPPPXGXXXXXXXXPP 851
PP PPP PP P PPPP G PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
>10_08_0608 +
19184722-19185224,19185331-19185410,19186048-19186235,
19187021-19187927,19188015-19188142,19189270-19189356,
19189422-19189472,19189582-19189668,19189746-19189873,
19190469-19190608,19190721-19190882,19190964-19192733,
19192807-19192922,19193077-19193227,19193243-19193371,
19193598-19194139
Length = 1722
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 663 PXXFXXPPXPPPHXXXPPXXXP 728
P PP PPPH PP P
Sbjct: 20 PPELRLPPPPPPHPPPPPPLEP 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,321,287
Number of Sequences: 37544
Number of extensions: 471860
Number of successful extensions: 1366
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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