Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H21
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 36 0.041
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.072
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 35 0.072
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.22
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 4.8
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 4.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.3
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 129 LCWLWPTLKETATNLLTTARTSLILPKTTT---LMETATNLSTTVHITWTVPKADLTSSL 299
LC+LW L T T TT T+ + TTT + T T T T TVP T+++
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTV 238
Query: 300 P 302
P
Sbjct: 239 P 239
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 35.1 bits (77), Expect = 0.072
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 141 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 299
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 35.1 bits (77), Expect = 0.072
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +3
Query: 141 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSL 299
WP ET TT T+ +P TTT+ T T +T T T A T+++
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAPTTTTM 350
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +3
Query: 144 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 293
PT + T T TT T+ P TTT ET T +TT T T P T+
Sbjct: 112 PTTETTTTPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTPTTTTTT 160
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +3
Query: 147 TLKETATNLLTTARTSLILPKTTTLMETATNLS-TTVHITWTVPKADLTSS 296
T T T TT T+ P TTT T T + TT T T P + T++
Sbjct: 69 TTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 147 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVPKADLTSSLPLS 308
T T T TT T+ +P TTT T T +TT T T P T + S
Sbjct: 198 TTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 144 PTLKETA-TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKADLTS 293
PT TA T TT T+ P TTT + T T TT T T P T+
Sbjct: 189 PTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTT 240
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = +3
Query: 147 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 293
T T T TT T+ P TTT T TT T T P T+
Sbjct: 83 TTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.89
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 144 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 308
P K+ N+ TT I TTT M T T ST + T T P+ ++P S
Sbjct: 275 PEKKKEVFNVFTTKTNPQI---TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 147 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 275
T T T TT+ T+ P TTT T STT T T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 147 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS-SLPLSLV 314
T T T TT T+ P TTT T T +TT T T P T+ S PL+ V
Sbjct: 90 TTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLTEV 144
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +3
Query: 159 TATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTVPKADLTSSLP 302
T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 304 TETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +3
Query: 159 TATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTVPKADLTSS 296
T T TT TS P TTT T T STT T T+ T++
Sbjct: 297 TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 153 KETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVGSK 332
KET T+L T PKTTT++ ++T ST +T +A T++ P + V +K
Sbjct: 442 KETTTSLATEQ------PKTTTIVASSTETST---VTTDATEATTTTTAPTTTVATTTTK 492
Query: 333 E 335
+
Sbjct: 493 K 493
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 144 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 293
P+ T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 144 PTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 293
P+ T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 144 PTLKETATNLLTTARTSLILPKTTTLMET--ATNLSTTVHITWTVPKADLTSSLPLSLVL 317
PT+ T T ++TT T + +P T + T TN ST V TV T S V+
Sbjct: 361 PTVATTPTTVVTTPSTVVTVPSTVVTVPTTVVTNPSTVVTAPSTVVTVPTTVMTSRSTVI 420
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/82 (25%), Positives = 21/82 (25%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXX 785
PP P G P P P PPP PP P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP---PPPTGSPPPPPAGGSPPPPR 293
Query: 786 XXXXXXPPPPXGXXXXXXXXPP 851
PPPP G PP
Sbjct: 294 AGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/82 (25%), Positives = 21/82 (25%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXX 785
PP P G P P P PPP PP P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP---PPPTGSPPPPPAGGSPPPPR 314
Query: 786 XXXXXXPPPPXGXXXXXXXXPP 851
PPPP G PP
Sbjct: 315 AGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/82 (25%), Positives = 21/82 (25%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXX 785
PP P G P P P PPP PP P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP---PPPTGSPPPPPAGGSPPPPR 299
Query: 786 XXXXXXPPPPXGXXXXXXXXPP 851
PPPP G PP
Sbjct: 300 AGSPPPPPPPRGSPPTGSLPPP 321
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 3/75 (4%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPP---XXXPXXXXXXXXXPXXXXXX 776
P P G P G P PP PPP PP P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 777 XXXXXXXXXPPPPXG 821
PPPP G
Sbjct: 777 PGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 3/75 (4%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPP---XXXPXXXXXXXXXPXXXXXX 776
P P G P G P PP PPP PP P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 777 XXXXXXXXXPPPPXG 821
PPPP G
Sbjct: 777 PGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 3/75 (4%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPP---XXXPXXXXXXXXXPXXXXXX 776
P P G P G P PP PPP PP P P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 777 XXXXXXXXXPPPPXG 821
PPPP G
Sbjct: 360 PGGFKGGPPPPPPPG 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,240,489
Number of Sequences: 27780
Number of extensions: 355300
Number of successful extensions: 1186
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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