Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H21
(934 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g26000.2 68418.m03094 glycosyl hydrolase family 1 protein con... 31 0.83
At5g26000.1 68418.m03093 glycosyl hydrolase family 1 protein con... 31 0.83
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.83
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 29 3.3
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 4.4
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 29 4.4
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 29 4.4
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 4.4
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 28 7.7
At4g08370.1 68417.m01382 proline-rich extensin-like family prote... 28 7.7
At1g72110.1 68414.m08335 expressed protein 28 7.7
>At5g26000.2 68418.m03094 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
identical to Myrosinase precursor (Sinigrinase)
(SP:P37702) [Arabidopsis thaliana]
Length = 456
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +2
Query: 101 MKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGN---GY-EPIDNGAYYVD 268
MK M+ + LLA+A +G+ + +N P+ N K +N +GN G+ + + AY V+
Sbjct: 1 MKLLMLAFVFLLALATCKGDEFVCEENEPFTCNQTKLFN-SGNFEKGFIFGVASSAYQVE 59
Query: 269 RPQGR 283
+GR
Sbjct: 60 GGRGR 64
>At5g26000.1 68418.m03093 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
identical to Myrosinase precursor (Sinigrinase)
(SP:P37702) [Arabidopsis thaliana]
Length = 541
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +2
Query: 101 MKFFMIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDYNPNGN---GY-EPIDNGAYYVD 268
MK M+ + LLA+A +G+ + +N P+ N K +N +GN G+ + + AY V+
Sbjct: 1 MKLLMLAFVFLLALATCKGDEFVCEENEPFTCNQTKLFN-SGNFEKGFIFGVASSAYQVE 59
Query: 269 RPQGR 283
+GR
Sbjct: 60 GGRGR 64
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/86 (24%), Positives = 22/86 (25%), Gaps = 4/86 (4%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPP----XPPPHXXXPPXXXPXXXXXXXXXPXXXXX 773
PP P P F P + PP PPPH PP P P
Sbjct: 538 PPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTP 597
Query: 774 XXXXXXXXXXPPPPXGXXXXXXXXPP 851
PPP PP
Sbjct: 598 VSSPPPTPVYSPPPPPPCIEPPPPPP 623
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 603 APPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXP 728
+PP P P P PP PPPH PP P
Sbjct: 511 SPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSP 552
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = +3
Query: 681 PPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXXXXXXXXPPPPXGXXXXXXXXPPXXX 860
PP PPP PP P P PPPP PP
Sbjct: 428 PPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSP 487
Query: 861 XP 866
P
Sbjct: 488 PP 489
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/89 (23%), Positives = 21/89 (23%)
Frame = +3
Query: 663 PXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXXXXXXXXPPPPXGXXXXXXX 842
P PP PPP PP P P PPPP
Sbjct: 445 PPPVYSPPPPPP----PPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPP 500
Query: 843 XPPXXXXPXXXXXXPXXXXXXPXXLXPXP 929
PP P P P P P
Sbjct: 501 PPPPPPPPVYSPPPPPVYSSPPPPPSPAP 529
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/83 (24%), Positives = 20/83 (24%)
Frame = +3
Query: 681 PPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXXXXXXXXPPPPXGXXXXXXXXPPXXX 860
PP PPP PP P P PPPP PP
Sbjct: 386 PPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPP-YVYPPPPSPPYVY 444
Query: 861 XPXXXXXXPXXXXXXPXXLXPXP 929
P P P P P
Sbjct: 445 PPPPPSPQPYMYPSPPCNDLPTP 467
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXP 728
PP P P P + PP PPP+ PP P
Sbjct: 401 PPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPP 441
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/69 (24%), Positives = 18/69 (26%), Gaps = 1/69 (1%)
Frame = +3
Query: 663 PXXFXXPPXPPP-HXXXPPXXXPXXXXXXXXXPXXXXXXXXXXXXXXXPPPPXGXXXXXX 839
P + PP PPP H PP P P PPP
Sbjct: 528 PPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVH 587
Query: 840 XXPPXXXXP 866
PP P
Sbjct: 588 SPPPPVHSP 596
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/108 (20%), Positives = 22/108 (20%)
Frame = +3
Query: 606 PPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXX 785
PP P P P PP PP H PP P P
Sbjct: 535 PPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVH 594
Query: 786 XXXXXXPPPPXGXXXXXXXXPPXXXXPXXXXXXPXXXXXXPXXLXPXP 929
P PP P P P P P
Sbjct: 595 SPPPPAPVHSPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPP 642
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +2
Query: 137 AMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 307
A N Q P + P P NP N Y+ +YYV + P +PT F
Sbjct: 790 ASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQVSHPPMQQPTMF 846
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +2
Query: 137 AMANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPF 307
A N Q P + P P NP N Y+ +YYV + P +PT F
Sbjct: 792 ASGNTQPQSTMPYNQEPTQAQPNVLANPYDNQYQQPYTDSYYVPQVSHPPMQQPTMF 848
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/83 (22%), Positives = 20/83 (24%)
Frame = +3
Query: 603 APPXPKXXGKXPFFXXXXGXPXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXX 782
+PP P P P PP PPP PP P
Sbjct: 558 SPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPPPPVFSPPPPSPVYS 617
Query: 783 XXXXXXXPPPPXGXXXXXXXXPP 851
PPPP PP
Sbjct: 618 PPPPSHSPPPPVYSPPPPTFSPP 640
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 681 PPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXXXXXXXXPPPP 815
PP PPH PP P P PPPP
Sbjct: 36 PPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHPHQPPPP 80
>At4g08370.1 68417.m01382 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 350
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/51 (25%), Positives = 15/51 (29%)
Frame = +3
Query: 663 PXXFXXPPXPPPHXXXPPXXXPXXXXXXXXXPXXXXXXXXXXXXXXXPPPP 815
P + PP PPP+ P P P PPPP
Sbjct: 69 PYVYNSPPPPPPYIYNSPPRPPYVYKSPPPPPFVYSSPPPPTYIYNSPPPP 119
>At1g72110.1 68414.m08335 expressed protein
Length = 479
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 398 NSYEILKYIVNTLFRY*-FSKIFFTSHREHQGK 303
N+ I++ I NTL + FS I T H EH+GK
Sbjct: 41 NASTIVEGIKNTLINHPRFSSILVTGHGEHKGK 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,317,436
Number of Sequences: 28952
Number of extensions: 329669
Number of successful extensions: 1054
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2227127592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -