Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H20
(963 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0309 - 23987669-23988042,23989485-23989560 43 4e-04
07_03_1738 - 29141829-29141989,29142112-29142343,29142751-291427... 42 0.001
03_02_0817 + 11492699-11492774,11493605-11493978 42 0.001
01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097 42 0.001
01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858 42 0.001
01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651 40 0.004
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 37 0.028
06_03_1326 - 29355467-29355817 30 3.2
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 29 4.2
02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 29 4.2
08_01_0121 - 963297-963743 29 5.5
07_03_0559 + 19475893-19476783 29 7.3
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787... 29 7.3
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 28 9.6
>05_05_0309 - 23987669-23988042,23989485-23989560
Length = 149
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT+EQIAEFKEAFSLF+
Sbjct: 1 MADQLTDEQIAEFKEAFSLFD 21
>07_03_1738 -
29141829-29141989,29142112-29142343,29142751-29142792,
29143312-29143410,29143575-29143667,29143742-29143876,
29144251-29144290,29144475-29144844,29146575-29146650
Length = 415
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QIAEFKEAFSLF+
Sbjct: 1 MADQLTDDQIAEFKEAFSLFD 21
>03_02_0817 + 11492699-11492774,11493605-11493978
Length = 149
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QIAEFKEAFSLF+
Sbjct: 1 MADQLTDDQIAEFKEAFSLFD 21
>01_01_1223 + 9886709-9886784,9887566-9887935,9888028-9888097
Length = 171
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QIAEFKEAFSLF+
Sbjct: 1 MADQLTDDQIAEFKEAFSLFD 21
>01_01_1156 - 9194477-9194485,9194801-9195156,9197783-9197858
Length = 146
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QIAEFKEAFSLF+
Sbjct: 1 MADQLTDDQIAEFKEAFSLFD 21
>01_06_1085 + 34414353-34414428,34416038-34416407,34416534-34416651
Length = 187
Score = 39.5 bits (88), Expect = 0.004
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQL+EEQI EF+EAFSLF+
Sbjct: 1 MADQLSEEQIGEFREAFSLFD 21
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 36.7 bits (81), Expect = 0.028
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2
Query: 137 QMADQLTEEQIAEFKEAFSLFE 202
Q+ D LT+EQIAEF+EAF+LF+
Sbjct: 448 QLMDHLTKEQIAEFREAFNLFD 469
>06_03_1326 - 29355467-29355817
Length = 116
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -2
Query: 749 GXXXGXXKGXXXXXGVXXXPKGGXXXFXGGXXKNKXKGGGGXXGGXXGG 603
G G G G KGG GG GGGG GG GG
Sbjct: 3 GKGGGGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGGGGGGKGGGEGG 51
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
M L E+QI++F++AFSLF+
Sbjct: 1 MESHLNEQQISDFRDAFSLFD 21
>02_05_1057 +
33809982-33810366,33810436-33810687,33810727-33810926,
33811021-33811122
Length = 312
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = -2
Query: 767 FXPKXXGXXXGXXKGXXXXXGVXXXPKGGXXXFXGGXXKNKXKGGGGXXGGXXGG 603
F P G G G +GG GG + GGGG GG GG
Sbjct: 41 FIPGIIGGGGGGGGGGTGDACSPGTAEGGCGGGCGGENDDTGNGGGGGGGGGGGG 95
>08_01_0121 - 963297-963743
Length = 148
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2
Query: 149 QLTEEQIAEFKEAFSLFE 202
+L+EEQ+A +EAFSLF+
Sbjct: 5 ELSEEQVASMREAFSLFD 22
>07_03_0559 + 19475893-19476783
Length = 296
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 686 GGXXXFXGGXXKNKXKGGGGXXGGXXGG 603
GG F GG K G GG GG GG
Sbjct: 206 GGGGGFGGGGGKGGGFGAGGVMGGGAGG 233
>01_01_0995 +
7875273-7875495,7876196-7876274,7876422-7876536,
7878507-7878761
Length = 223
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -2
Query: 665 GGXXKNKXKGGGGXX--GGXXGGXXXFXXKKXRPPP 564
GG + K KGGGG GG G F PPP
Sbjct: 5 GGDEREKAKGGGGGGGGGGGGGEYGTFQGPPSYPPP 40
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = -2
Query: 686 GGXXXFXGGXXKNKXKGGGGXXGGXXGG 603
GG GG K KGGGG GG G
Sbjct: 209 GGGGGGGGGGKKKGKKGGGGGGGGNGNG 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,274,125
Number of Sequences: 37544
Number of extensions: 179852
Number of successful extensions: 425
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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