Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H20
         (963 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin pr...    44   2e-04
AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin pr...    44   2e-04
Z75552-2|CAA99944.1|  894|Caenorhabditis elegans Hypothetical pr...    33   0.23 
Z75552-1|CAA99941.1|  920|Caenorhabditis elegans Hypothetical pr...    33   0.23 
U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin rela...    33   0.23 
Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical pr...    28   8.6  
X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.        28   8.6  

>AJ132193-1|CAA10601.1|  149|Caenorhabditis elegans calmodulin
           protein.
          Length = 149

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +2

Query: 140 MADQLTEEQIAEFKEAFSLFE 202
           MADQLTEEQIAEFKEAFSLF+
Sbjct: 1   MADQLTEEQIAEFKEAFSLFD 21


>AF016429-2|AAB65364.1|  149|Caenorhabditis elegans Calmodulin
           protein 1 protein.
          Length = 149

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +2

Query: 140 MADQLTEEQIAEFKEAFSLFE 202
           MADQLTEEQIAEFKEAFSLF+
Sbjct: 1   MADQLTEEQIAEFKEAFSLFD 21


>Z75552-2|CAA99944.1|  894|Caenorhabditis elegans Hypothetical
           protein W04D2.1b protein.
          Length = 894

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +2

Query: 119 DNQVNLQMADQLTEEQIAEFKEAFSLFEXKR 211
           +NQV L+ +  ++EEQIAEF+ +FS F+ +R
Sbjct: 738 ENQVLLRDSKGISEEQIAEFRASFSHFDKER 768


>Z75552-1|CAA99941.1|  920|Caenorhabditis elegans Hypothetical
           protein W04D2.1a protein.
          Length = 920

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 15/31 (48%), Positives = 24/31 (77%)
 Frame = +2

Query: 119 DNQVNLQMADQLTEEQIAEFKEAFSLFEXKR 211
           +NQV L+ +  ++EEQIAEF+ +FS F+ +R
Sbjct: 764 ENQVLLRDSKGISEEQIAEFRASFSHFDKER 794


>U70851-8|AAB09131.1|  164|Caenorhabditis elegans Calmodulin related
           genes protein 3 protein.
          Length = 164

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 21/52 (40%), Positives = 25/52 (48%)
 Frame = +2

Query: 149 QLTEEQIAEFKEAFSLFEXKRRWHHHDXRXGPXXXXPLGXNPXKTXXXXLIH 304
           QLTEE+I EFKEAF LF+            G      LG NP +     +IH
Sbjct: 22  QLTEEEIHEFKEAFLLFDKDGNGTISIKELG-VAMRALGQNPTEQQMMEIIH 72


>Z82282-1|CAB05271.1|  182|Caenorhabditis elegans Hypothetical
           protein T07G12.1 protein.
          Length = 182

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 122 NQVNLQMADQLTEEQIAEFKEAFSLFE 202
           NQ     AD+ T E++ EF +AF LF+
Sbjct: 7   NQSVCSDADEFTPEELQEFAQAFKLFD 33


>Z77653-1|CAB01124.1|  218|Caenorhabditis elegans Hypothetical
           protein C13C12.1 protein.
          Length = 218

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 125 QVNLQMADQLTEEQIAEFKEAFSLFE 202
           Q +  +  QLT E+I EF+EAF +F+
Sbjct: 66  QFSEDIIKQLTPEEIDEFREAFMMFD 91


>X04259-1|CAA27814.1|  161|Caenorhabditis elegans cal-1 protein.
          Length = 161

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 125 QVNLQMADQLTEEQIAEFKEAFSLFE 202
           Q +  +  QLT E+I EF+EAF +F+
Sbjct: 9   QFSEDIIKQLTPEEIDEFREAFMMFD 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,624,766
Number of Sequences: 27780
Number of extensions: 125433
Number of successful extensions: 344
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2490012644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)