Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H20
(963 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to calm... 42 8e-04
At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to calm... 42 8e-04
At5g21274.1 68418.m02533 calmodulin-6 (CAM6) identical to calmod... 40 0.002
At3g56800.1 68416.m06317 calmodulin-2/3/5 (CAM3) identical to ca... 40 0.002
At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to... 40 0.002
At2g41110.1 68415.m05078 calmodulin-2/3/5 (CAM2) (CAL1) almost i... 40 0.002
At2g27030.3 68415.m03247 calmodulin-2/3/5 (CAM5) (TCH1) identica... 40 0.002
At2g27030.1 68415.m03245 calmodulin-2/3/5 (CAM5) (TCH1) identica... 40 0.002
At3g22930.1 68416.m02889 calmodulin, putative strong similarity ... 33 0.21
At2g41100.2 68415.m05077 touch-responsive protein / calmodulin-r... 33 0.37
At2g41100.1 68415.m05076 touch-responsive protein / calmodulin-r... 33 0.37
At1g15840.1 68414.m01901 expressed protein 30 2.0
At4g14640.1 68417.m02252 calmodulin-8 (CAM8) identical to calmod... 29 3.5
At3g51920.1 68416.m05695 calmodulin-9 (CAM9) identical to calmod... 29 3.5
At1g02710.1 68414.m00222 glycine-rich protein 29 6.1
>At5g37780.1 68418.m04549 calmodulin-1/4 (CAM1) identical to
calmodulin 4 [Arabidopsis thaliana] GI:16223, SP|P25854
Calmodulin-1/4 {Arabidopsis thaliana}
Length = 149
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT+EQI+EFKEAFSLF+
Sbjct: 1 MADQLTDEQISEFKEAFSLFD 21
>At1g66410.1 68414.m07542 calmodulin-1/4 (CAM4) identical to
calmodulin [Arabidopsis thaliana] GI:16223; nearly
identical to SP|P25854 Calmodulin-1/4 {Arabidopsis
thaliana}
Length = 149
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT+EQI+EFKEAFSLF+
Sbjct: 1 MADQLTDEQISEFKEAFSLFD 21
>At5g21274.1 68418.m02533 calmodulin-6 (CAM6) identical to
calmodulin-6 SP:Q03509 from [Arabidopsis thaliana];
contains Pfam profile: PF00036 EF hand
Length = 149
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QI+EFKEAFSLF+
Sbjct: 1 MADQLTDDQISEFKEAFSLFD 21
>At3g56800.1 68416.m06317 calmodulin-2/3/5 (CAM3) identical to
calmodulin GI:474183 from [Arabidopsis thaliana]; almost
identical to calmodulin-2/3/5 SP:P25069 [Arabidopsis
thaliana]
Length = 149
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QI+EFKEAFSLF+
Sbjct: 1 MADQLTDDQISEFKEAFSLFD 21
>At3g43810.1 68416.m04682 calmodulin-7 (CAM7) almost identical to
calmodulin GI:16227 from [Arabidopsis thaliana],
SP|P59220 Calmodulin-7 {Arabidopsis thaliana}
Length = 149
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QI+EFKEAFSLF+
Sbjct: 1 MADQLTDDQISEFKEAFSLFD 21
>At2g41110.1 68415.m05078 calmodulin-2/3/5 (CAM2) (CAL1) almost
identical to Calmodulin-2/3/5 SP:P25069 from
[Arabidopsis thaliana]
Length = 149
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QI+EFKEAFSLF+
Sbjct: 1 MADQLTDDQISEFKEAFSLFD 21
>At2g27030.3 68415.m03247 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 181
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QI+EFKEAFSLF+
Sbjct: 1 MADQLTDDQISEFKEAFSLFD 21
>At2g27030.1 68415.m03245 calmodulin-2/3/5 (CAM5) (TCH1) identical
to calmodulin GI:474183 from [Arabidopsis thaliana],
SP|P25069 Calmodulin-2/3/5 {Arabidopsis thaliana}
Length = 149
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/21 (80%), Positives = 21/21 (100%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MADQLT++QI+EFKEAFSLF+
Sbjct: 1 MADQLTDDQISEFKEAFSLFD 21
>At3g22930.1 68416.m02889 calmodulin, putative strong similarity to
calmodulin 8 GI:5825600 from [Arabidopsis thaliana];
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 173
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 125 QVNLQMADQLTEEQIAEFKEAFSLFE 202
Q Q +LT+EQI EFKEAF LF+
Sbjct: 19 QQQQQQQQELTQEQIMEFKEAFCLFD 44
>At2g41100.2 68415.m05077 touch-responsive protein /
calmodulin-related protein 3, touch-induced (TCH3)
identical to calmodulin-related protein 3, touch-induced
SP:P25071 from [Arabidopsis thaliana]
Length = 235
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MAD+LT++QI E++E+F LF+
Sbjct: 1 MADKLTDDQITEYRESFRLFD 21
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 113 APDNQVNLQMADQLTEEQIAEFKEAFSLFE 202
AP + + QLT++QI EF+EAF +F+
Sbjct: 82 APRHTKKTMVDYQLTDDQILEFREAFRVFD 111
>At2g41100.1 68415.m05076 touch-responsive protein /
calmodulin-related protein 3, touch-induced (TCH3)
identical to calmodulin-related protein 3, touch-induced
SP:P25071 from [Arabidopsis thaliana]
Length = 324
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MAD+LT++QI E++E+F LF+
Sbjct: 1 MADKLTDDQITEYRESFRLFD 21
Score = 32.7 bits (71), Expect = 0.37
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MAD+LT++QI E++E+F LF+
Sbjct: 90 MADKLTDDQITEYRESFRLFD 110
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 113 APDNQVNLQMADQLTEEQIAEFKEAFSLFE 202
AP + + QLT++QI EF+EAF +F+
Sbjct: 171 APRHTKKTMVDYQLTDDQILEFREAFRVFD 200
>At1g15840.1 68414.m01901 expressed protein
Length = 126
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 689 KGGXXXFXGGXXKNKXKGGGGXXGGXXG 606
KGG GG + K K GGG GG G
Sbjct: 21 KGGGNTITGGGGEGKKKNGGGEGGGGEG 48
>At4g14640.1 68417.m02252 calmodulin-8 (CAM8) identical to
calmodulin 8 GI:5825600 from [Arabidopsis thaliana]
Length = 151
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 152 LTEEQIAEFKEAFSLFE 202
LT++QI EFKEAF LF+
Sbjct: 6 LTKDQITEFKEAFCLFD 22
>At3g51920.1 68416.m05695 calmodulin-9 (CAM9) identical to
calmodulin 9 GI:5825602 from [Arabidopsis thaliana];
contains Pfam profile PF00036: EF hand
Length = 151
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 140 MADQLTEEQIAEFKEAFSLFE 202
MAD T+EQI EF EAF L +
Sbjct: 1 MADAFTDEQIQEFYEAFCLID 21
>At1g02710.1 68414.m00222 glycine-rich protein
Length = 96
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 749 GXXXGXXKGXXXXXGVXXXPKGGXXXFXGGXXKNKXKGGGGXXGGXXGG 603
G G G G KGG GG ++ GGGG G GG
Sbjct: 47 GEGGGGEGGGGEGGGGQKISKGGGGGGSGGGQRSSSGGGGGGGEGDGGG 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,174,392
Number of Sequences: 28952
Number of extensions: 123929
Number of successful extensions: 272
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2324382072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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