Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H18
(953 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0140 + 12255418-12255512,12257514-12257793 133 2e-31
08_02_1181 - 24985963-24986242,24987109-24987197 132 5e-31
02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649 112 3e-25
06_03_0219 - 18227559-18227858,18227864-18228340 26 2.4
06_01_0941 + 7241050-7241331 29 5.5
02_04_0294 - 21658515-21658573,21658642-21659047,21659166-216593... 29 7.2
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 25 7.8
04_04_0708 - 27441373-27442611 25 8.3
10_08_0026 - 14253680-14253894,14253981-14254109,14254704-142547... 25 8.8
03_02_0436 + 8427018-8427707,8429005-8429544 28 9.5
>06_02_0140 + 12255418-12255512,12257514-12257793
Length = 124
Score = 133 bits (322), Expect = 2e-31
Identities = 65/118 (55%), Positives = 84/118 (71%), Gaps = 2/118 (1%)
Frame = +3
Query: 108 KGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTR 287
K +R G + +EVVTREYT+NLHKRLHG FKK+AP AIKEIRKFA+K MGT D+RVD +
Sbjct: 4 KKQRPGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRVDVK 63
Query: 288 LNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 455
LNK +WS G+R+VP ND+ED+ +L++LVT VP +KGL T+ V+
Sbjct: 64 LNKHIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKLVE 121
>08_02_1181 - 24985963-24986242,24987109-24987197
Length = 122
Score = 132 bits (318), Expect = 5e-31
Identities = 66/117 (56%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
Frame = +3
Query: 114 ERKGKSAINE-VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRL 290
E+KG +A E VVTREYT+NLHKRLH FKK+AP AIKEIRKFA+K MGT D+RVD +L
Sbjct: 3 EKKGGAARKEEVVTREYTINLHKRLHSCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDVKL 62
Query: 291 NKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 455
NK +WS G+R+VP ND+ED+ +L++LVT VP +KGL T+ VD
Sbjct: 63 NKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTKVVD 119
>02_05_0532 - 29814199-29814478,29814922-29814969,29815558-29815649
Length = 139
Score = 112 bits (270), Expect = 3e-25
Identities = 60/124 (48%), Positives = 79/124 (63%), Gaps = 18/124 (14%)
Frame = +3
Query: 138 NEVVTREYTVNLHKRLHGV----------------GFKKRAPRAIKEIRKFAEKQMGTPD 269
+EVVTREYT+NLHKRLHG FKK+AP AIKEIRKFA+K MGT D
Sbjct: 13 DEVVTREYTINLHKRLHGCIVCSNDLIHYAPDIVSTFKKKAPNAIKEIRKFAQKAMGTTD 72
Query: 270 IRVDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQT 443
IR+D +LNK +W+ G+R+VP ND+ED+ +L++LVT +P +KGL T
Sbjct: 73 IRIDVKLNKAIWTNGIRSVPRRVRVRISRKRNDEEDAKEELYSLVTVAEIPAEGLKGLGT 132
Query: 444 ENVD 455
+ V+
Sbjct: 133 KVVE 136
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P SPPPPPP F P
Sbjct: 96 PASPPPPPPRLALRFPRRP 114
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P + PPPPP
Sbjct: 92 PSPPPASPPPPP 103
>06_01_0941 + 7241050-7241331
Length = 93
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 761 PPGXXXKKXXXXGGGGGGXXGXXGXXXTKXAIASXXSQIK 642
PP GGGGGG G G TK A AS ++K
Sbjct: 20 PPPPSSSSGKRSGGGGGG-GGKKGMEKTKAAAASGLRKVK 58
>02_04_0294 -
21658515-21658573,21658642-21659047,21659166-21659307,
21659411-21659626,21659735-21659830,21660180-21660295,
21660501-21660604,21660970-21661067,21661167-21661272,
21661386-21661473
Length = 476
Score = 28.7 bits (61), Expect = 7.2
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -3
Query: 645 KAFFSRHFSXGLSKLINVXYHVWIQ 571
K SRHFS +++++++ Y +W+Q
Sbjct: 45 KVGISRHFSREITRILDMAYKLWLQ 69
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 25.0 bits (52), Expect(2) = 7.8
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P +PPPPPP F P
Sbjct: 328 PPAPPPPPPPPSRFNNTTP 346
Score = 21.8 bits (44), Expect(2) = 7.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPP
Sbjct: 324 PSNPPPAPPPPP 335
>04_04_0708 - 27441373-27442611
Length = 412
Score = 25.0 bits (52), Expect(2) = 8.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 238 PLLPPPPPPPPP 249
Score = 21.8 bits (44), Expect(2) = 8.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 709 PPPPPPXXXXF 741
PPPPPP F
Sbjct: 242 PPPPPPPPPPF 252
>10_08_0026 -
14253680-14253894,14253981-14254109,14254704-14254769,
14254887-14255133
Length = 218
Score = 25.0 bits (52), Expect(2) = 8.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 700 PXSPPPPPP 726
P SPPPPPP
Sbjct: 162 PGSPPPPPP 170
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +1
Query: 709 PPPPPPXXXXFFXXXPG 759
PPPPPP PG
Sbjct: 166 PPPPPPSPSSSSPATPG 182
>03_02_0436 + 8427018-8427707,8429005-8429544
Length = 409
Score = 28.3 bits (60), Expect = 9.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 676 FVXXXPXXPXSPPPPPPXXXXFF 744
F P P PPPPPP F+
Sbjct: 108 FFPLLPPLPPQPPPPPPFFADFY 130
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,874,224
Number of Sequences: 37544
Number of extensions: 335616
Number of successful extensions: 4706
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3901
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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