BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H18
(953 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p pro... 175 6e-44
AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,... 175 6e-44
AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,... 175 6e-44
AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,... 175 6e-44
AE014298-475|AAF45833.2| 887|Drosophila melanogaster CG3588-PB,... 25 4.8
AL031366-1|CAA20520.1| 809|Drosophila melanogaster EG:100G7.6 p... 25 4.8
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 25 6.0
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro... 25 6.0
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro... 25 6.1
K02620-1|AAA28967.1| 510|Drosophila melanogaster protein ( D.me... 26 8.4
>AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p
protein.
Length = 124
Score = 175 bits (427), Expect = 6e-44
Identities = 80/124 (64%), Positives = 99/124 (79%)
Frame = +3
Query: 96 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 275
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 276 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 455
+DTRLNK +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120
Query: 456 ASQE 467
+S +
Sbjct: 121 SSDD 124
>AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,
isoform C protein.
Length = 124
Score = 175 bits (427), Expect = 6e-44
Identities = 80/124 (64%), Positives = 99/124 (79%)
Frame = +3
Query: 96 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 275
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 276 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 455
+DTRLNK +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120
Query: 456 ASQE 467
+S +
Sbjct: 121 SSDD 124
>AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,
isoform B protein.
Length = 124
Score = 175 bits (427), Expect = 6e-44
Identities = 80/124 (64%), Positives = 99/124 (79%)
Frame = +3
Query: 96 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 275
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 276 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 455
+DTRLNK +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120
Query: 456 ASQE 467
+S +
Sbjct: 121 SSDD 124
>AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,
isoform A protein.
Length = 124
Score = 175 bits (427), Expect = 6e-44
Identities = 80/124 (64%), Positives = 99/124 (79%)
Frame = +3
Query: 96 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 275
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 276 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 455
+DTRLNK +WSKG+R+ PF NDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120
Query: 456 ASQE 467
+S +
Sbjct: 121 SSDD 124
>AE014298-475|AAF45833.2| 887|Drosophila melanogaster CG3588-PB,
isoform B protein.
Length = 887
Score = 25.0 bits (52), Expect(2) = 4.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 783 PPPPPPPPPPPP 794
Score = 23.4 bits (48), Expect(2) = 4.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPPP + P
Sbjct: 813 PPPPPPPPPVPYPYTPIYP 831
>AL031366-1|CAA20520.1| 809|Drosophila melanogaster EG:100G7.6
protein.
Length = 809
Score = 25.0 bits (52), Expect(2) = 4.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 643 PPPPPPPPPPPP 654
Score = 23.4 bits (48), Expect(2) = 4.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPPP + P
Sbjct: 673 PPPPPPPPPVPYPYTPIYP 691
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 25.0 bits (52), Expect(2) = 6.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 676 FVXXXPXXPXSPPPPP 723
FV P P PPPPP
Sbjct: 725 FVAPPPPPPPPPPPPP 740
Score = 23.0 bits (47), Expect(2) = 6.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 700 PXSPPPPPP 726
P PPPPPP
Sbjct: 747 PPPPPPPPP 755
>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
protein.
Length = 1153
Score = 25.0 bits (52), Expect(2) = 6.0
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 676 FVXXXPXXPXSPPPPP 723
FV P P PPPPP
Sbjct: 592 FVAPPPPPPPPPPPPP 607
Score = 23.0 bits (47), Expect(2) = 6.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 700 PXSPPPPPP 726
P PPPPPP
Sbjct: 614 PPPPPPPPP 622
>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
protein.
Length = 1058
Score = 25.0 bits (52), Expect(2) = 6.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 676 FVXXXPXXPXSPPPPP 723
FV P P PPPPP
Sbjct: 497 FVAPPPPPPPPPPPPP 512
Score = 23.0 bits (47), Expect(2) = 6.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 700 PXSPPPPPP 726
P PPPPPP
Sbjct: 519 PPPPPPPPP 527
>K02620-1|AAA28967.1| 510|Drosophila melanogaster protein (
D.melanogaster tropomyosingene isoform 33 (9B0, exon
10B. ).
Length = 510
Score = 25.8 bits (54), Expect(2) = 8.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 679 VXXXPXXPXSPPPPPP 726
V P P PPPPPP
Sbjct: 368 VEAPPAEPEDPPPPPP 383
Score = 21.8 bits (44), Expect(2) = 8.4
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 709 PPPPPPXXXXFFXXXPGG 762
PPPPPP P G
Sbjct: 380 PPPPPPPFEYSIDLPPEG 397
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,232,953
Number of Sequences: 53049
Number of extensions: 563764
Number of successful extensions: 4845
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4135
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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