Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H18
(953 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26230.1 68417.m03776 60S ribosomal protein L31 (RPL31B) ribo... 130 2e-30
At5g56710.1 68418.m07078 60S ribosomal protein L31 (RPL31C) 127 9e-30
At2g19740.1 68415.m02306 60S ribosomal protein L31 (RPL31A) 127 1e-29
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 25 1.0
At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family... 25 1.4
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 25 1.8
At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family... 25 2.4
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 29 3.4
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 25 3.7
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 25 5.2
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 24 6.2
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 25 6.5
At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family... 25 6.5
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 26 6.8
At4g17250.1 68417.m02594 expressed protein 28 7.9
At3g19400.2 68416.m02460 cysteine proteinase, putative non-conse... 28 7.9
At3g19400.1 68416.m02461 cysteine proteinase, putative non-conse... 28 7.9
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 28 7.9
At3g11030.1 68416.m01331 expressed protein contains Pfam domain ... 24 8.9
At5g03380.1 68418.m00291 heavy-metal-associated domain-containin... 24 9.0
>At4g26230.1 68417.m03776 60S ribosomal protein L31 (RPL31B)
ribosomal protein L31, Nicotiana glutinosa, U23784
Length = 119
Score = 130 bits (313), Expect = 2e-30
Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Frame = +3
Query: 114 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 293
E+KG+ EVVTREYT+NLH+RLH FKK+AP+AIKEIRKFAEK+MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60
Query: 294 KFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 455
K +WSKG+R P NDDED+ + F+LVT +P + GL T+ ++
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIE 116
>At5g56710.1 68418.m07078 60S ribosomal protein L31 (RPL31C)
Length = 119
Score = 127 bits (307), Expect = 9e-30
Identities = 61/116 (52%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Frame = +3
Query: 114 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 293
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 294 KFLWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 455
K +WSKG+R P NDDED+ + F+LVT +P + GL T+ ++
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>At2g19740.1 68415.m02306 60S ribosomal protein L31 (RPL31A)
Length = 119
Score = 127 bits (306), Expect = 1e-29
Identities = 61/117 (52%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Frame = +3
Query: 120 KGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 299
KGK EVVTREYT+NLH+RLH FKK+AP AIKEIRKFA K MGT D+RVD +LNK
Sbjct: 3 KGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQ 62
Query: 300 LWSKGVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTY--VPVASIKGLQTENVDASQ 464
+WSKG+R P NDDED+ + F+LVT +P + GL T+ ++ +
Sbjct: 63 IWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 25.0 bits (52), Expect(2) = 1.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 596 PPRPPPPPPPPP 607
Score = 24.6 bits (51), Expect(2) = 1.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 700 PXSPPPPPPXXXXF 741
P +PPPPPP F
Sbjct: 615 PSAPPPPPPPPPSF 628
>At5g57070.1 68418.m07124 hydroxyproline-rich glycoprotein family
protein Common family members: At5g26070, At5g19800,
At1g72790 [Arabidopsis thaliana]
Length = 575
Score = 25.0 bits (52), Expect(2) = 1.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 382 PPSPPPPPPPPP 393
Score = 24.2 bits (50), Expect(2) = 1.4
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPPP F P
Sbjct: 421 PAPPPPPPPRYTQFDPQTP 439
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 25.4 bits (53), Expect(2) = 1.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 679 VXXXPXXPXSPPPPPP 726
V P P PPPPPP
Sbjct: 463 VYSPPPPPPPPPPPPP 478
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 451 PPPPPPPPPPPP 462
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPPP + P
Sbjct: 466 PPPPPPPPPPPPPVYSPPP 484
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P SPPPPPP
Sbjct: 445 PPPVYSPPPPPP 456
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPPP + P
Sbjct: 451 PPPPPPPPPPPPVYSPPPP 469
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P SPPPPPP
Sbjct: 460 PPPVYSPPPPPP 471
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPPP + P
Sbjct: 467 PPPPPPPPPPPPVYSPPPP 485
Score = 23.4 bits (48), Expect(2) = 1.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPPP + P
Sbjct: 497 PPPPPPPPPPPPVYSPPPP 515
>At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 473
Score = 25.0 bits (52), Expect(2) = 2.4
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 280 PSPPPPPPPPPP 291
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 709 PPPPPPXXXXFFXXXP 756
PPPPPP ++ P
Sbjct: 331 PPPPPPPPVEYYKSPP 346
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 691 PXXPXSPPPPPPXXXXFFXXXPG 759
P P PPPPPP F PG
Sbjct: 78 PPSPLPPPPPPPPPNYVFTYPPG 100
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 25.0 bits (52), Expect(2) = 3.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 700 PXSPPPPPP 726
P SPPPPPP
Sbjct: 1118 PPSPPPPPP 1126
Score = 22.6 bits (46), Expect(2) = 3.7
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 691 PXXPXSPPPPP 723
P P PPPPP
Sbjct: 1104 PPPPSQPPPPP 1114
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 25.0 bits (52), Expect(2) = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 23 PPLPPPPPPPPP 34
Score = 22.2 bits (45), Expect(2) = 5.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 709 PPPPPPXXXXFFXXXP 756
PPPPPP F P
Sbjct: 28 PPPPPPPQLPFGPKLP 43
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 23.8 bits (49), Expect(2) = 6.2
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 700 PXSPPPPPP 726
P +PPPPPP
Sbjct: 787 PSAPPPPPP 795
Score = 23.0 bits (47), Expect(2) = 6.2
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 691 PXXPXSPPPPP 723
P P +PPPPP
Sbjct: 770 PPPPTAPPPPP 780
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 25.0 bits (52), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P PPPPPP
Sbjct: 22 PLPPPPPPPPPP 33
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 709 PPPPPPXXXXF 741
PPPPPP F
Sbjct: 70 PPPPPPPLPMF 80
>At5g19800.1 68418.m02353 hydroxyproline-rich glycoprotein family
protein similar to extensin [Catharanthus roseus]
gi|1486263|dbj|BAA13175; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 96
Score = 25.4 bits (53), Expect(2) = 6.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 679 VXXXPXXPXSPPPPPP 726
V P P PPPPPP
Sbjct: 42 VYSPPISPPPPPPPPP 57
Score = 21.8 bits (44), Expect(2) = 6.5
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 706 SPPPPPPXXXXFFXXXPGG 762
SPPPPP + P G
Sbjct: 69 SPPPPPSKYGRVYPPPPPG 87
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 26.2 bits (55), Expect(2) = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 670 AXFVXXXPXXPXSPPPPPP 726
A F P P PPPPPP
Sbjct: 370 ASFGCSPPSPPPPPPPPPP 388
Score = 20.6 bits (41), Expect(2) = 6.8
Identities = 7/19 (36%), Positives = 8/19 (42%)
Frame = +1
Query: 700 PXSPPPPPPXXXXFFXXXP 756
P PPPPP + P
Sbjct: 411 PSPPPPPPSPPPYVYPPPP 429
>At4g17250.1 68417.m02594 expressed protein
Length = 416
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 162 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 281
TV KR + +KKR A+K+ + E++ G P ++ D
Sbjct: 169 TVPATKRFLELKYKKRYEFALKQCPSYTERRRGVPKLKED 208
>At3g19400.2 68416.m02460 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 290
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 156 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 299
++ V K +G+G K+R + K+ KF ++ PD + L +F
Sbjct: 46 QWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRF 93
>At3g19400.1 68416.m02461 cysteine proteinase, putative
non-consensus AT acceptor site at exon 3; contains
similarity to cysteine protease CYP1 GI:2828252, TDI-65
GI:5726641 from [Lycopersicon esculentum]
Length = 362
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 156 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 299
++ V K +G+G K+R + K+ KF ++ PD + L +F
Sbjct: 46 QWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRF 93
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 640 CFICEXXDAXAXFVXXXPXXPXSPPPPPP 726
CF+ F P P PPPPPP
Sbjct: 26 CFLLVQSQDPPLFPQSPPPPPPPPPPPPP 54
>At3g11030.1 68416.m01331 expressed protein contains Pfam domain
PF03005: Arabidopsis proteins of unknown function
Length = 451
Score = 23.8 bits (49), Expect(2) = 8.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 691 PXXPXSPPPPPP 726
P P SPPPP P
Sbjct: 66 PPPPTSPPPPSP 77
Score = 22.6 bits (46), Expect(2) = 8.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 700 PXSPPPPPPXXXXF 741
P SPPPP P F
Sbjct: 84 PPSPPPPSPPPPAF 97
>At5g03380.1 68418.m00291 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP2
[GI:4097545]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 392
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 755 GXXXKKXXXXGGGGGGXXG 699
G KK GGGGGG G
Sbjct: 263 GGEKKKEVAVGGGGGGGGG 281
Score = 22.6 bits (46), Expect(2) = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -1
Query: 725 GGGGGGXXGXXGXXXTK 675
GGGGGG G G K
Sbjct: 275 GGGGGGGGGDGGAMDVK 291
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,494,896
Number of Sequences: 28952
Number of extensions: 254205
Number of successful extensions: 1864
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2295205728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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