Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H15
(910 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 89 8e-19
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 64 3e-11
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 60 6e-10
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 30 0.52
SPBC21C3.09c |||fumarylacetoacetate |Schizosaccharomyces pombe|c... 27 3.7
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 27 4.9
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 27 4.9
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 26 6.4
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 26 6.4
SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyc... 26 6.4
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 26 8.5
SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe... 26 8.5
SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 ... 26 8.5
>SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase
Fkh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 112
Score = 89.0 bits (211), Expect = 8e-19
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +3
Query: 231 KHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTI 410
K GD +TMHYTGTL +G KFDSS DR PF IGVGQ+I+GWD+G+ M +GEK KLTI
Sbjct: 18 KPGDRITMHYTGTLTNGKKFDSSVDRGSPFVCTIGVGQLIRGWDEGVPKMSLGEKAKLTI 77
Query: 411 PASLG 425
G
Sbjct: 78 TPDYG 82
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1
Query: 421 WGYGERGAGNVIPPHATLHFEVELINIGD 507
+GYG RG +IPP++TL F+VEL+ I D
Sbjct: 81 YGYGPRGFPGLIPPNSTLLFDVELLAIND 109
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 64.1 bits (149), Expect = 3e-11
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +3
Query: 162 AGPEVTELKTEVV--SVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIG 335
+ P+ LK VV V G + +G + M Y G L++G FD + + +PF F +G
Sbjct: 248 SSPKTRTLKGGVVVTDVKTGSGASATNGKKVEMRYIGKLENGKVFDKN-TKGKPFAFILG 306
Query: 336 VGQVIKGWDQGLLDMCVGEKRKLTIPASL 422
G+VI+GWD G+ M G +RK+TIPA +
Sbjct: 307 RGEVIRGWDVGVAGMQEGGERKITIPAPM 335
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 59.7 bits (138), Expect = 6e-10
Identities = 31/84 (36%), Positives = 48/84 (57%)
Frame = +3
Query: 171 EVTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSSYDRDQPFTFQIGVGQVI 350
+V E V +G +K ++M Y G L +G FD + +PFTF +G+ +VI
Sbjct: 254 QVLEGNVTVQDKVKGDGPAAKRKKRVSMRYIGRLTNGKVFDKNIT-GKPFTFNLGLEEVI 312
Query: 351 KGWDQGLLDMCVGEKRKLTIPASL 422
KGWD G++ M VG +R + IPA++
Sbjct: 313 KGWDVGIVGMQVGGERTIHIPAAM 336
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 29.9 bits (64), Expect = 0.52
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 529 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLVEXIFQHEDKDXN 708
FK D D+D +S E+ YL +M+ G + ED Q+ + DK + + DKD +
Sbjct: 99 FKIYDIDRDGYISNGEL--YLVLKMMV--GTNLRED--QLQQIVDKTIMEV----DKDRD 148
Query: 709 GFISHEEF 732
G IS EEF
Sbjct: 149 GKISFEEF 156
>SPBC21C3.09c |||fumarylacetoacetate |Schizosaccharomyces pombe|chr
2|||Manual
Length = 221
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 433 ERGAGN-VIPPHATLHFEVEL 492
E G GN +IPP + H+EVEL
Sbjct: 42 EPGHGNLIIPPDVSAHYEVEL 62
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 112 RRCAACLCWLPWPGPRSRV 168
R C C CWLP SRV
Sbjct: 113 RMCGTCKCWLPDRSHHSRV 131
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 535 EIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIK 642
E D +KDN + EE +D ++ GG+++ D K
Sbjct: 51 EADGEKDNGMDEEEQNDAQPSKIPWLPGGKINADEK 86
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 529 FKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQM 648
F+ + K+N+ R E+ +YL+ Q +P D EDIK++
Sbjct: 307 FEILYNSKENVEKRTEIDEYLQIQPLPTD-----EDIKKI 341
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 26.2 bits (55), Expect = 6.4
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 484 VELINIGDSPPAT---NVFKEIDADKDNMLSREEVSDYLKKQMVPADGGEVSEDIKQMLE 654
V + ++G SP A ++ E+DAD + + E + ++M D E++++ +
Sbjct: 36 VVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDN---EEEVREAFK 92
Query: 655 SHDKLVEXIFQHEDKDXNGFISHEEFS 735
+F DKD NG+I+ EE +
Sbjct: 93 --------VF---DKDGNGYITVEELT 108
>SPCC1223.04c |mug76||lysine methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 487 ELINIGDSPPATNVFKEIDADKDNMLSREEVSDYLKK--QMVPADGGEVSEDIK 642
E +N V + I+ D R++V DYLKK Q + + E E +K
Sbjct: 296 EKLNDASYDQTRRVLQYINGFSDGSRDRQDVEDYLKKVLQELLCEAEECKEKVK 349
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 430 GERGAGNVIPPHATLHFEVELINIGDSP 513
G+ G+G + P AT +FE ++ NI D P
Sbjct: 376 GKLGSGLINPLVATQNFEYKMSNILDKP 403
>SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 156 TFAGPEVTELKTEVVSVPEGCTTKSKH 236
TF ++T L+ +++ +PEG +T KH
Sbjct: 174 TFDDLQLTPLQRKLMGLPEGGSTSGKH 200
>SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 315
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 463 HATLHFEVELINIGDSPPATNVFKEIDADKDNMLSREEVSD-YLKKQ 600
H L+ + ELI+ S VF+ ID N+ R+ D Y+K++
Sbjct: 265 HKDLNEDEELISSSPSEVGKRVFRLIDLSTGNVYRRDTGGDIYVKRK 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,944,122
Number of Sequences: 5004
Number of extensions: 58303
Number of successful extensions: 179
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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