Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H14
         (951 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    26   0.49 
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    26   0.49 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   1.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.5  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   6.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   6.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   6.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 40  LRFEIHLAVKVTTVFLFSVNFCIGEVY 120
           L F +   V V T+F F+ N   GE+Y
Sbjct: 529 LMFGVSFVVIVITIFFFTANVQAGELY 555


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 40  LRFEIHLAVKVTTVFLFSVNFCIGEVY 120
           L F +   V V T+F F+ N   GE+Y
Sbjct: 254 LMFGVSFVVIVITIFFFTANVQAGELY 280


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +3

Query: 138 PKRXGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGK 257
           PKR  I      ++  S   ++ +   T    Y+C  CGK
Sbjct: 76  PKRQFICKYCNRQFTKSYNLLIHERTHTDERPYSCDICGK 115


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 71  SQLFFFSLSTFVSERFTKMAKRTKKVWNYW 160
           ++LFFF      S  F  +AKR  K    W
Sbjct: 87  NRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 71  SQLFFFSLSTFVSERFTKMAKRTKKVWNYW 160
           ++LFFF      S  F  +AKR  K    W
Sbjct: 87  NRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 71  SQLFFFSLSTFVSERFTKMAKRTKKV 148
           + +F   LST ++ RFT++  RT+ +
Sbjct: 230 NDVFVMLLSTALAYRFTQVTDRTQSM 255


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 71  SQLFFFSLSTFVSERFTKMAKRTKKV 148
           + +F   LST ++ RFT++  RT+ +
Sbjct: 230 NDVFVMLLSTALAYRFTQVTDRTQSM 255


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +2

Query: 71  SQLFFFSLSTFVSERFTKMAKRTKKV 148
           + +F   LST ++ RFT++  RT+ +
Sbjct: 230 NDVFVMLLSTALAYRFTQVTDRTQSM 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,914
Number of Sequences: 336
Number of extensions: 3492
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26789147
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)