Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H14
(951 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.04c |rpl4301|rpl43-1, rpl43, rpl37a-1|60S ribosomal prot... 119 7e-28
SPBC83.02c |rpl4302|rpl43-2, rpl43, rpl37a-2|60S ribosomal prote... 117 2e-27
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.026
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.078
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.10
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.18
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 30 0.55
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.2
SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual 28 2.2
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 26 6.8
SPBC29A3.05 |||chromatin remodeling complex subunit|Schizosaccha... 26 9.0
>SPBC800.04c |rpl4301|rpl43-1, rpl43, rpl37a-1|60S ribosomal protein
L37a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 94
Score = 119 bits (286), Expect = 7e-28
Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 2/86 (2%)
Frame = +3
Query: 141 KRXGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSC--KRCKRT 314
K+ G+TGKYG RYGASLR+ V+K+EV QH++Y C FCG++ +KR+ GIW C K CK+
Sbjct: 6 KKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKGCKKV 65
Query: 315 VAGGAWVFSTTAASSCRSAVRRLREV 392
+AGGAW +T AA+S RS +RRLRE+
Sbjct: 66 LAGGAWTVTTAAATSARSTIRRLREM 91
>SPBC83.02c |rpl4302|rpl43-2, rpl43, rpl37a-2|60S ribosomal protein
L37a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 94
Score = 117 bits (282), Expect = 2e-27
Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +3
Query: 141 KRXGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCGKDAMKRSCVGIWSC--KRCKRT 314
K+ G+TGKYG RYGASLR+ V+K+EV QH++Y C FCG+ +KR+ GIW C K C +T
Sbjct: 6 KKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKT 65
Query: 315 VAGGAWVFSTTAASSCRSAVRRLREV 392
+AGGAW +T AA+S RS +RRLRE+
Sbjct: 66 LAGGAWTVTTAAATSARSTIRRLREM 91
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.026
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 787 PXLPXSPPXXNPXPXXXPPXXXX-PXXXPLXXGPXPXSPPXPRGXPPXPP 933
P P S P P P P P+ P P +PP P G P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +1
Query: 775 PLXGPXLPXSPPXXNPXPXXXPPXXXXPXXXPLXXGPXPXSPPXP 909
P P PP P P PP P P P +P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.078
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +1
Query: 796 PXSPPXXNPXPXXXPPXXXXPXXXPLXXGPXPXSPP---XPRGXPPXPP 933
P PP P P P P+ GP P PP G PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.10
Identities = 23/66 (34%), Positives = 24/66 (36%)
Frame = -2
Query: 932 GGXGGXPRGXGGXXGXGPXXRGXXXGXXXXGGXXXGXGLXXGGEXGRXGPKXGXXAGRXX 753
GG GG G GG G RG G G G G GG GR G + G
Sbjct: 9 GGRGGSRGGRGGFNGG----RGGFGGGRG-GARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Query: 752 GGGGIG 735
GG G
Sbjct: 64 RGGAKG 69
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = -2
Query: 809 GGEXGRXGPKXGXXAGRXXGGGGIG*CRXNXXXTXPGEXXNXKRXAXGGG*XGGXXGXXR 630
GG G G + G GR GGG G R G G G G G +
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 629 G 627
G
Sbjct: 69 G 69
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = +1
Query: 775 PLXGPXLPXSPPXXNPX--PXXXPPXXXXPXXXPLXXGPXPXSPPXPRGXPPXPP 933
P P LP S P P P P P PL G P +PP P P PP
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG-MPAAPPLPPAAPAPPP 478
Score = 29.5 bits (63), Expect = 0.73
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 778 LXGPXLPXSPPXXNPXPXXXPPXXXXPXXXPLXXGPXPXS--PPXPRGXPPXPP 933
+ G P PP N PP P P P S P P G P PP
Sbjct: 395 IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 789 PPPXFPXXXQPXXPPXXXXXXXXXXXPPXXGAXPPXSPXTPGXPP 923
PPP P P PP P + PP +P P PP
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP--PSLPP 433
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +1
Query: 775 PLXGPXLPXSPPXXNPXPXXXPPXXXXPXXXPLXXGPXPXSPPXPRGXPPXP 930
P P LP P P P P P P P +P P P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 775 PLXGPXLPXSPPXXNPXPXXXPPXXXXPXXXPLXXGPXPXSPPXPRGXPPXP 930
P P P S P P PP P P PP PP P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.1 bits (57), Expect = 3.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 792 PPXFPXXXQPXXPPXXXXXXXXXXXPPXXGAXPPXSPXTPGXPP 923
PP P P PP P A PP P P PP
Sbjct: 436 PPSLPMGA-PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.18
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = -2
Query: 932 GGXGGXPRGXGGXXGXGPXXRGXXXGXXXXGGXXXGXGLXXGGEXGRXGPKXGXXAGRXX 753
G GG G GG G P G G GG G GG G G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGE----GHHHGGHGGFGGGPGGFEGGPGG 239
Query: 752 GGGGIG 735
GGG G
Sbjct: 240 FGGGPG 245
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.9 bits (64), Expect = 0.55
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +1
Query: 775 PLXGPXLPXSP-PXXNPXPXXXPPXXXXPXXXPLXXGPXPXSPPXPRGXPPXP 930
PL +P P P P P P P PL P P P P G PP P
Sbjct: 92 PLLNELVPEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVP-EEPLP-GEPPLP 142
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +1
Query: 802 SPPXXNPXPXXXPPXXXXPXXXPLXXGPXPXSPPXPR---GXPPXPP 933
+PP P P PP P P PP P+ G PP PP
Sbjct: 1149 APPV--PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Frame = +1
Query: 796 PXSPPXXNPXPXXXPPXXXXPXXXPLXXGPXP-XSPPXPRGXPP 924
P +P P PP P P P P +PP P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 796 PXSPPXXNPXPXXXPPXXXXPXXXPLXXGPXPXS-PPXPRGXPPXP 930
P +P P PP P P P P S PP P PP P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPR--PSIPPPSPASAPPIPSKAPPIP 168
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Frame = +1
Query: 796 PXSPPXXNPXPXXXPPXXXX--PXXXPLXXGPXPXSPPX-PRGXPPXPP 933
P SP P P PP P P P S P P PP PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPBC4F6.05c |||lectin |Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 319 ATVLLHRLQDQMPTQERFIASLPQNEQVYFACWVTS 212
+T +L ++ Q+ T F+A + +NE +FA W TS
Sbjct: 69 STSVLRQVGWQLSTS--FVAHVSENENTFFAIWYTS 102
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 222 QHAKYT-CSFCGKDAMKRSCVGIWSCKRCKR 311
+H K T C C + +K C +W C+ CK+
Sbjct: 15 RHRKITSCRECHR--LKLKCDRVWPCENCKK 43
>SPBC29A3.05 |||chromatin remodeling complex
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 139
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 231 KYTCSFCGKDAMKRSCVGIWSCKRCKRTVA 320
KY C CG + C I S RC + A
Sbjct: 110 KYACQNCGTSYCSKGCEVIHSETRCMKVYA 139
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,726,220
Number of Sequences: 5004
Number of extensions: 47056
Number of successful extensions: 159
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 140
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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