Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H13
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.061
03_01_0515 - 3864796-3865425 33 0.43
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 32 0.57
06_01_0486 - 3455030-3455770 32 0.57
12_02_1174 - 26696869-26698191 32 0.75
07_01_0479 + 3606663-3607448 32 0.75
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 31 1.00
06_03_1006 + 26844161-26844198,26844304-26844372,26844526-268445... 31 1.3
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 2.3
12_02_0299 - 17051570-17052474,17053542-17053755 29 4.0
03_02_0342 - 7645323-7645909,7646323-7646491 29 4.0
08_01_0059 - 394001-394708 29 5.3
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 29 5.3
04_03_0925 - 20856628-20856690,20856786-20856845,20856924-208570... 29 5.3
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 5.3
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 29 7.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 9.3
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 28 9.3
01_01_0715 - 5542648-5543219,5543352-5543544 28 9.3
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.5 bits (78), Expect = 0.061
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 759 PPXXPXXPXPXPXXAGPXPXPXXXGFXXXSPXPXXXLPXXXXPPXPXXNXXXP 917
PP P P P P GP P P G P P PP P P
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRP 389
Score = 31.9 bits (69), Expect = 0.75
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +3
Query: 726 PXNKXXXXXXXPPXXPXXPXPXPXXAGPXPXPXXXGFXXXSPXPXXXLPXXXXPPXPXXN 905
P K PP P P P GP P P G P P P PP P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKG---PPPPPPPKGPSPPPPPPPGGK 373
Query: 906 XXXP 917
P
Sbjct: 374 KGGP 377
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 2/54 (3%)
Frame = +3
Query: 762 PXXPXXPXPXPXXAGPXPXPXXXGFXXXSP--XPXXXLPXXXXPPXPXXNXXXP 917
P P P P P A P P P P P P PP P P
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 757 PPPXXXP-XXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPP 891
PPP P P P+ P P G PP P P P PP
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPPPPAKG-PPPPPPPKGPSPPPPPPP 370
>03_01_0515 - 3864796-3865425
Length = 209
Score = 32.7 bits (71), Expect = 0.43
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +1
Query: 706 SILNSXTPXTXXXXXFXPPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXX 885
S+ +S P PPP P P P P PP P P P
Sbjct: 56 SVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSS 115
Query: 886 PPXP 897
PP P
Sbjct: 116 PPPP 119
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 32.3 bits (70), Expect = 0.57
Identities = 31/136 (22%), Positives = 44/136 (32%)
Frame = +3
Query: 489 LREKLQAXVQNTVQXSQKLAKKVSSNVQETNEKLAPKIKXXYDDFXNXXQXVLXRILXXP 668
++E QA N V+ + +L K V+S+V + L P+ K D + I
Sbjct: 1055 MQENEQAIAPNFVEENIRLPKDVTSDVPMEDASLLPRDKQQTDGAIPVVHDLQHEIDREQ 1114
Query: 669 SXXGXXXPXPXSVHIELSHPXNKXXXXXXXPPXXPXXPXPXPXXAGPXPXPXXXGFXXXS 848
+ P L PP P P P P + P P +
Sbjct: 1115 ALADQNELPP------LPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPAT 1168
Query: 849 PXPXXXLPXXXXPPXP 896
P P L PP P
Sbjct: 1169 PPPPPPLSPSLPPPPP 1184
Score = 31.9 bits (69), Expect = 0.75
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +1
Query: 757 PP--PXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
PP P P P P P LSP PP P P P PP P
Sbjct: 1154 PPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLP 1202
>06_01_0486 - 3455030-3455770
Length = 246
Score = 32.3 bits (70), Expect = 0.57
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
PPP P P P P P T PP P P P PP P
Sbjct: 96 PPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSP-PPYVPPPTP 141
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.9 bits (69), Expect = 0.75
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = +3
Query: 690 PXPXSVHIELSHPXNKXXXXXXXPPXXPXXPXPXPXXAGPXPXPXXXGFXXXSPXPXXXL 869
P P + P PP P P P P P P P P L
Sbjct: 126 PPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSL 185
Query: 870 PXXXXPPXP 896
PP P
Sbjct: 186 QPPSPPPPP 194
>07_01_0479 + 3606663-3607448
Length = 261
Score = 31.9 bits (69), Expect = 0.75
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 760 PPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPP 891
PP P P R PG+ P G PP P P PP
Sbjct: 175 PPPMRPPQMPIPFQRPPGVPPAFPGGPPPPPGPFMRGPPPMGPP 218
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 31.5 bits (68), Expect = 1.00
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +3
Query: 759 PPXXPXXPXPXPXXAGPXPXPXXXGFXXXSPXPXXXLPXXXXPP 890
P P P P P A P P P SP P P PP
Sbjct: 53 PTAPPPKPSPTPPPASPPPAPTPPQTRPPSPPPQQQQPRPVSPP 96
>06_03_1006 +
26844161-26844198,26844304-26844372,26844526-26844591,
26844831-26844902,26844982-26845053,26846179-26846244,
26846409-26846881,26846966-26847324,26847429-26847697,
26847780-26847918,26848323-26848462,26848612-26848768,
26848925-26848978,26849457-26849539,26851085-26851136
Length = 702
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/66 (27%), Positives = 21/66 (31%)
Frame = +3
Query: 723 HPXNKXXXXXXXPPXXPXXPXPXPXXAGPXPXPXXXGFXXXSPXPXXXLPXXXXPPXPXX 902
+P N PP P P P P P P P G P P P P P
Sbjct: 132 NPFNTSIAPSASPPSTPGGPAPTPTPTRPAPSPSPTG----PPTPSPTNPNLEPSPPPPS 187
Query: 903 NXXXPT 920
+ P+
Sbjct: 188 SSAPPS 193
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 799 PRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
P PG P +G PP P P P PP P
Sbjct: 251 PAAPGTLPNGSGGPPRPPPPQVPPPPPQAPPPP 283
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 751 FXPPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPP 891
F PP P P P P P F PP P P PP
Sbjct: 249 FLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPP 295
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Frame = +1
Query: 724 TPXTXXXXXFXPPPXXXPXXXPXXXPRXPGLSPXXTG-FXXXPPXPXXPFPXXXXPPXP 897
TP + F P P P P P L P + PP P PFP PP P
Sbjct: 251 TPPSPPPPAFPFPLPPWPWAPPPAFP-FPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLP 308
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 751 FXPPPXXXPXXX-PXXXPRXPGLSPXXTGF-XXXPPXPXXPFPXXXXPPXP 897
F PPP P P P P L+P T PP P P P P P
Sbjct: 171 FAPPPPPPPRPPAPEYKPPTPTLTPIPTPEPSYGPPAPKPPAPPVEDEPQP 221
>08_01_0059 - 394001-394708
Length = 235
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPP 891
PPP P P P +P PP P P P PP
Sbjct: 4 PPPPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPP 48
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTG-FXXXPPXPXXPFPXXXXPPXPXXXG 909
PPP P P P P P TG PP P P PP P G
Sbjct: 585 PPPEPSPPPAPKAAPPPP--PPKSTGPGPPRPPPPAMPGSSKTRPPPPLKPG 634
>04_03_0925 -
20856628-20856690,20856786-20856845,20856924-20857001,
20857127-20857192,20857542-20858675,20858991-20860283
Length = 897
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 759 PPXXPXXPXPXPXXAGPXPXPXXXGFXXXSP 851
PP P P P P A P P P G +P
Sbjct: 9 PPEHPPTPAPAPAPASPPPHPAASGNEAAAP 39
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 760 PPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPP 891
P P P PR P +P PP P P P PP
Sbjct: 61 PQYPMPGSLPPPPPRPPSFAPENALPPSSPPPPSPPPPPPSSPP 104
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -2
Query: 407 PKPPWPXRSRL-RALPWRLLAKALSCCSTDSEPSF 306
P PP P + + R + W+ A +CC D P F
Sbjct: 82 PPPPPPKQEKAKRVVRWKCAAGCGACCKLDKGPDF 116
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXP-FPXXXXPPXP 897
PPP P P P SP G PP P P P PP P
Sbjct: 321 PPPPPAHPAAPAPPP--PAPSPSAAGAGSGPPPPPPPAAPAAPRPPGP 366
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 759 PPXXPXXPXPXPXXAGPXPXPXXXGFXXXSPXPXXXLPXXXXPPXP 896
PP P P P GP P P G P P P P P
Sbjct: 169 PPKPKPGPKPKPPKPGPKPKPPKPG---PKPKPKPPKPGPKPKPKP 211
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
PPP P P P T PP P P P PP P
Sbjct: 147 PPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVP-APAPAGSPPPPP 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,769,139
Number of Sequences: 37544
Number of extensions: 238543
Number of successful extensions: 1321
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -