Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H13
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.8
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 4.8
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 4.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.3
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
PPP P P PG P TG PP P P PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Frame = +3
Query: 690 PXPXSVHIELSHPXNKXXXXXXXPPXXPXXPXPX---PXXAGPXPXPXXXGFXXXSPXPX 860
P P + LS P PP P P P GP P P G + P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 861 XXLPXXXXPP 890
P PP
Sbjct: 744 PPPPPGGLPP 753
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 727 PXTXXXXXFXPPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
P T PP P P PG P +G PP P P PP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
PPP P P PG P TG PP P P PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Frame = +3
Query: 690 PXPXSVHIELSHPXNKXXXXXXXPPXXPXXPXPX---PXXAGPXPXPXXXGFXXXSPXPX 860
P P + LS P PP P P P GP P P G + P
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 861 XXLPXXXXPP 890
P PP
Sbjct: 744 PPPPPGGLPP 753
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 727 PXTXXXXXFXPPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
P T PP P P PG P +G PP P P PP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
PPP P P PG P TG PP P P PP P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Frame = +3
Query: 690 PXPXSVHIELSHPXNKXXXXXXXPPXXPXXPXPX---PXXAGPXPXPXXXGFXXXSPXPX 860
P P + LS P PP P P P GP P P G + P
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
Query: 861 XXLPXXXXPP 890
P PP
Sbjct: 327 PPPPPGGLPP 336
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +1
Query: 727 PXTXXXXXFXPPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
P T PP P P PG P +G PP P P PP P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 799 PRXPGLSPXXTGFXXXPPXPXXPFPXXXXPPXP 897
P PG++P TG PP P PP P
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPP 555
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPP 891
PPP P P PG +P G PP P P PP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP---PSRFGPP 328
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -1
Query: 102 TECGGDANRTANTEECQNL 46
T CGG+ANR A+ ++C++L
Sbjct: 1406 TGCGGNANRFASKDQCESL 1424
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -1
Query: 102 TECGGDANRTANTEECQNL 46
T CGG+ANR A+ ++C++L
Sbjct: 1406 TGCGGNANRFASKDQCESL 1424
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 757 PPPXXXPXXXPXXXPRXPGLSPXXTGFXXXPPXPXXPFPXXXXPP 891
PPP P P PG +P G PP P P PP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP---PSRFGPP 338
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -2
Query: 890 GGXXXXGKGXXGXGGXXXKPVXXGXRPGXRGXXXGXXXGXXXGGG 756
GG G G G GG G G RG G G GGG
Sbjct: 82 GGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 151 HRSGPRSDGATRRSRLLQGHRTPHQGXSIRL 243
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,266,295
Number of Sequences: 27780
Number of extensions: 171628
Number of successful extensions: 847
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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