Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H12
         (966 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.9  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 18/59 (30%), Positives = 19/59 (32%)
 Frame = +2

Query: 704 PPSXXXPXPXPPPPXPPXPXXXXXPXXXXXRGAGXPPFXXGXLRPPTXXXXXXGGFGXP 880
           P +   P P PPPP  P P             AG P       RPP       GG   P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPL----------AGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 15/61 (24%), Positives = 22/61 (36%)
 Frame = +2

Query: 569 NXKMVPPNXDGRLRXLRXXPPQEVDPXXSXEARQRQAVSVDIELSPPSXXXPXPXPPPPX 748
           N  + PP+   + +     PP+      + E         D +  P S   P   PPPP 
Sbjct: 625 NNVIPPPSAYQQQQPPVVPPPRTNSQSQASEPTPALPPRADRDSKPSSRDRPKDLPPPPI 684

Query: 749 P 751
           P
Sbjct: 685 P 685


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 11/38 (28%), Positives = 13/38 (34%)
 Frame = +1

Query: 727 PPPPXXXXPXXPXXXPPXXXXXPXRXXPPLXXGVXPXP 840
           PP P    P  P    P     P    P +  G+ P P
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRP 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,373
Number of Sequences: 2352
Number of extensions: 11877
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)