Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H11
         (948 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0513 - 16681227-16683936,16685572-16685966                       29   4.1  
08_02_0048 + 11606269-11606762,11623257-11623301,11623703-116237...    28   9.4  

>04_03_0513 - 16681227-16683936,16685572-16685966
          Length = 1034

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 265  QQGLLHKHESLRKFHDDVQGRIPSQEFGILDLL 363
            Q G+LH+ ESL    +D+ G IP QE   LD L
Sbjct: 905  QLGMLHQLESLDLSSNDLSGEIP-QELASLDFL 936


>08_02_0048 +
           11606269-11606762,11623257-11623301,11623703-11623772,
           11623862-11623896,11624013-11624075,11624140-11624158
          Length = 241

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -3

Query: 631 VKATIHHXNVVHFICNFHVDKILR----ISFVW 545
           V  T++  +++ F+C FHVD ++     ISF W
Sbjct: 204 VMMTLNKASLIRFVCPFHVDLLIHDERAISFDW 236


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,042,439
Number of Sequences: 37544
Number of extensions: 381349
Number of successful extensions: 752
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)