Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H10
         (983 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   6.1  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   8.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   8.0  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 186 LLAIRALVSPTLSYTRTIRRR 248
           L A+R  V P L+Y+  +RRR
Sbjct: 249 LTAVRGDVVPELTYSEVVRRR 269


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 233 YNQKTKKCEEFIYGGCKGNDNRFDT 307
           ++Q   KC  + Y  CK + N +D+
Sbjct: 425 FDQTVLKCNWWFYVDCKSSKNLYDS 449


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 233 YNQKTKKCEEFIYGGCKGNDNRFDT 307
           ++Q   KC  + Y  CK + N +D+
Sbjct: 433 FDQTVLKCNWWFYVDCKSSKNLYDS 457


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,536
Number of Sequences: 2352
Number of extensions: 9312
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107707938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)