Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H07
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   3.2  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   7.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   7.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   7.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   7.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.7  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
 Frame = -1

Query: 351 TRNNF*YFTPKKHTQHIQSFSHLFFNGASIILSIFNSFIKNVLILFHTSSREY*AWICSS 172
           T  NF       HT     F  +F+    I+L +  + +  V  LF+ S R   + +C+ 
Sbjct: 162 TSMNFVLLIGDLHTSIYIIFFDMFYQHHKIVLDMGKNCVTYVFDLFYLSKRA--SDLCNE 219

Query: 171 ICRL-IFFHGLKI 136
             +  I   GLKI
Sbjct: 220 ANKTKILLVGLKI 232


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 322 QKAHSAYPKFQPLVLQWSFHYPFHI 248
           ++    Y +FQ L L+  FH+  ++
Sbjct: 7   RRGRQTYTRFQTLELEKEFHFNHYL 31


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 280 EQVAETLDMLSV--LFGCEILKIIPGRVS 360
           E VA+ L + +V      EI K+IPGR++
Sbjct: 753 ENVAQYLQIENVEQTLNHEIKKVIPGRIT 781


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 322 QKAHSAYPKFQPLVLQWSFHYPFHI 248
           ++    Y +FQ L L+  FH+  ++
Sbjct: 158 RRGRQTYTRFQTLELEKEFHFNHYL 182


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -3

Query: 322 QKAHSAYPKFQPLVLQWSFHYPFHI 248
           ++    Y +FQ L L+  FH+  ++
Sbjct: 217 RRGRQTYTRFQTLELEKEFHFNHYL 241


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 805 PAXAPXPSPPP 837
           P   P PSPPP
Sbjct: 95  PTTPPTPSPPP 105


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,182
Number of Sequences: 336
Number of extensions: 3714
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)