Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H07
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr... 212 6e-56
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.031
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.66
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 28 1.5
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 27 2.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.5
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 27 3.5
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 26 6.1
SPAC6G10.08 |idp1||isocitrate dehydrogenase Idp1|Schizosaccharom... 26 8.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.1
>SPCC1020.06c |tal1||transaldolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 322
Score = 212 bits (517), Expect = 6e-56
Identities = 108/184 (58%), Positives = 134/184 (72%), Gaps = 1/184 (0%)
Frame = +1
Query: 82 MSALDQLKQHSTVV-ADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGK 258
MS+L+QLK TVV +DTGDFE++ +YKP DATTNPSLIL+A+ QY ++D A+ Y K
Sbjct: 1 MSSLEQLKATGTVVVSDTGDFESIAKYKPQDATTNPSLILAASKKPQYAALVDAAVDYAK 60
Query: 259 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFA 438
G SI Q+ D L + FG +IL I+PGRVS EVDAR SFD +I KA I L+
Sbjct: 61 AKGGSINSQIEIAFDRLLIEFGTKILAIVPGRVSTEVDARYSFDTQTTIEKARHLIKLYE 120
Query: 439 EHGIKKERILXKLASTWEGIQAAKELEKKXGIHCXLTLLFSLYQAIACAXANVTLISPXV 618
GI +ER+L K+AST+EGIQAAK+LE++ GIHC LTLLFS QA+ACA ANVTLISP V
Sbjct: 121 AEGIGRERVLIKIASTYEGIQAAKQLEEE-GIHCNLTLLFSFVQAVACAEANVTLISPFV 179
Query: 619 GRXI 630
GR +
Sbjct: 180 GRIL 183
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.031
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +1
Query: 781 PGXLXXTXPAXAPXPSPPPXXSXXSPPXAPPP 876
P + PA AP P PPP PP PPP
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 29.5 bits (63), Expect = 0.66
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP + PP PPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 805 PAXAPXPSPPPXXSXXSPPXAPP 873
PA P P P P PP PP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect = 0.66
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 805 PAXAPXPSPPPXXSXXSPPXAPPP 876
P P P PPP S P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = -2
Query: 449 IPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFNISHPKSTLSISKVSATCSSME 270
+P S NK+ + F + +N S+ ++ I N S P +S + +SAT S+E
Sbjct: 150 VPRSLNKIHDPSRF--IKDNDVENRIHVSSASKVASISNTSKPNPIVSENPISATSVSIE 207
Query: 269 LPL 261
+P+
Sbjct: 208 IPI 210
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/42 (28%), Positives = 27/42 (64%)
Frame = +2
Query: 416 LNLSIYLLNMVLKKKEFXLNWPPLGKEFKQPKSWRRSXESIV 541
L+ SI + + ++ +F L+ P+ ++FK +S+RR +S++
Sbjct: 362 LDTSISQIRVTHEQAKFLLSVIPVNQDFKALQSYRRILDSVI 403
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 814 APXPSPPPXXSXXSPPXAPP 873
AP P PPP S PP APP
Sbjct: 1704 APTPPPPPM-SVPPPPSAPP 1722
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P PS PP + PP APPP
Sbjct: 1716 PPPSAPPMPA--GPPSAPPP 1733
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = +1
Query: 808 AXAPXPSPPP-XXSXXSPPXAPP 873
A AP P PPP + SPP +PP
Sbjct: 250 APAPPPIPPPSNGTVSSPPNSPP 272
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -2
Query: 458 SFLIPCSANKLINLIAFAMLASLSNDNLASTSTDTRPGIIFNISHPKSTLS 306
S LIP +K +A +SL ++NLA+ + T IF+++ PK S
Sbjct: 159 SILIPTFVSKFNEFLALD--SSLRDNNLATVAVITTDKAIFSLNVPKKKRS 207
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 115 TVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDNGSSIEEQVAE 294
T +AD + + + D T L+L + G+E Y D A N S+EE + +
Sbjct: 273 TTIADYKEVAIQNKIEDDDTWTAQELVLLSEGVEMYSD--DWAKVASHVNTKSVEECILK 330
Query: 295 TLDMLS 312
L++ S
Sbjct: 331 FLNLPS 336
>SPAC6G10.08 |idp1||isocitrate dehydrogenase
Idp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -1
Query: 330 FTPKKHTQHIQSFSHLFFNGASIILSIFNS 241
FTPK + ++++ FNG+ + +S++N+
Sbjct: 166 FTPKGNPSAKETYNVYEFNGSGVAMSMYNT 195
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 805 PAXAPXPSPPPXXSXXSPPXAPPP 876
PA P PPP S SP P P
Sbjct: 738 PAVKHHPPPPPVRSSISPSMPPAP 761
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,000,926
Number of Sequences: 5004
Number of extensions: 57478
Number of successful extensions: 226
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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