Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H07
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006729-1|AAK93861.1| 319|Caenorhabditis elegans Hypothetical ... 228 5e-60
AC006729-2|AAM15613.1| 165|Caenorhabditis elegans Hypothetical ... 41 0.001
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.1
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 5.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.8
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 28 7.7
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 28 7.7
U23516-5|AAG38885.1| 449|Caenorhabditis elegans Glycosylation r... 28 7.7
AF082010-1|AAD03022.1| 449|Caenorhabditis elegans UDP-N-acetylg... 28 7.7
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 7.7
>AC006729-1|AAK93861.1| 319|Caenorhabditis elegans Hypothetical
protein Y24D9A.8a protein.
Length = 319
Score = 228 bits (557), Expect = 5e-60
Identities = 112/181 (61%), Positives = 139/181 (76%)
Frame = +1
Query: 82 MSALDQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 261
MS L+QLK S VVADTGDF A+KE++PTDATTNPSLIL+A+ MEQY ++D+++ Y K+
Sbjct: 1 MSVLEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKE 60
Query: 262 NGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSVEVDARLSFDKDASIAKAIKFINLFAE 441
+ S +E + +D L V+FG EILK IPGRVS EVDARLSFD ASI +A+ I + +
Sbjct: 61 HASGHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEK 120
Query: 442 HGIKKERILXKLASTWEGIQAAKELEKKXGIHCXLTLLFSLYQAIACAXANVTLISPXVG 621
GI K+RIL KLASTWEGI+AAK LE K GIHC +TLLF+ QA+ACA + VTLISP VG
Sbjct: 121 EGISKDRILIKLASTWEGIRAAKFLESKHGIHCNMTLLFNFEQAVACAESGVTLISPFVG 180
Query: 622 R 624
R
Sbjct: 181 R 181
>AC006729-2|AAM15613.1| 165|Caenorhabditis elegans Hypothetical
protein Y24D9A.8b protein.
Length = 165
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 544 LTLLFSLYQAIACAXANVTLISPXVGR 624
+TLLF+ QA+ACA + VTLISP VGR
Sbjct: 1 MTLLFNFEQAVACAESGVTLISPFVGR 27
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 805 PAXAPXPSPPPXXSXXSPPXAPPPA 879
P+ P PPP PP APPPA
Sbjct: 47 PSAESPPPPPPAPKVPEPPKAPPPA 71
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 31.5 bits (68), Expect = 0.82
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 259 DNGSSIEEQVAETLDMLSVLFGCEILKIIPGRVSV-EVDARLSFDKDASIAKAIKFINLF 435
D S++ E++ E ++++ + +V + E A+L+ +KD I K + I L
Sbjct: 218 DPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLN-EKDLVIEKITRKIELL 276
Query: 436 AEHGIKKERILXKLASTWEGIQAAKELEK 522
E+ +KK++ + +L +E K L+K
Sbjct: 277 QENNVKKDQRIYELEQCFESEDYCKILQK 305
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 805 PAXAPXPSPPPXXSXXSPPXAPPP 876
P P P PPP PP PPP
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPP 304
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP PP APPP
Sbjct: 52 PPPPPPPAPKVPEPPKAPPP 71
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 805 PAXAPXPSPPPXXSXXSPPXAPPP 876
P P P PPP PP PPP
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPP 314
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 814 APXPSPPPXXSXXSPPXAPPP 876
AP P PPP PP PPP
Sbjct: 575 APPPPPPPPPMLGGPPPPPPP 595
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 781 PGXLXXTXPAXAPXPSPPPXXSXXSPPXAPPP 876
P L P P PPP PP PPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 799 TXPAXAPXPSPPPXXSXXSPPXAPPPA 879
T P P P+PPP +P +P PA
Sbjct: 457 TTPPTTPKPAPPPPSRIPNPSPSPQPA 483
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP + PP PPP
Sbjct: 90 PTPGPPPPRNNCLPPPGPPP 109
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP + PP PPP
Sbjct: 90 PTPGPPPPRNNCLPPPGPPP 109
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP + PP PPP
Sbjct: 90 PTPGPPPPRNNCLPPPGPPP 109
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 814 APXPSPPPXXSXXSPPXAPPP 876
+P P PPP PP +PPP
Sbjct: 137 SPPPPPPPRVPRTPPPRSPPP 157
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 799 TXPAXAPXPSPPPXXSXXSPPXAPPPA 879
T P P P+PPP +P +P PA
Sbjct: 464 TTPPTTPKPAPPPPSRIPNPSPSPQPA 490
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 805 PAXAPXPSPPPXXSXXSPPXAPPP 876
P+ P P PPP S P PPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPP 1359
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP PP PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP PP PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP PP PPP
Sbjct: 758 PPPPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP PP PPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPPP 790
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 799 TXPAXAPXPSPPPXXSXXSPPXAPPP 876
T A P P PPP S P PPP
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPP 176
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 799 TXPAXAPXPSPPPXXSXXSPPXAPPP 876
T A P P PPP S P PPP
Sbjct: 151 TSSAPPPPPPPPPVSVPSSKPTPPPP 176
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP PP PPP
Sbjct: 341 PPPPPPPPGGCPPPPPPPPP 360
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 817 PXPSPPPXXSXXSPPXAPPP 876
P P PPP PP PPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPPP 373
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +1
Query: 799 TXPAXAPXPSPPPXXSXXSPPXAP--PP 876
T PA P PPP + PP AP PP
Sbjct: 242 TVPAVVAPPPPPPTTTTAPPPAAPEQPP 269
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +1
Query: 799 TXPAXAPXPSPPPXXSXXSPPXAP--PP 876
T PA P PPP + PP AP PP
Sbjct: 242 TVPAVVAPPPPPPTTTTAPPPAAPEQPP 269
>U23516-5|AAG38885.1| 449|Caenorhabditis elegans Glycosylation
related protein 13 protein.
Length = 449
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 524 FFSNSLAA*IPSQVEANLXKI-LSFLIPCSANKLINLIAFAMLASLSNDNLAS 369
FFS LA + N KI L +L+P + K NL LS DN+AS
Sbjct: 316 FFSKHLAKIKVNDKYINFGKIDLDYLLPANFAKKTNLEVMKEAVELSIDNVAS 368
>AF082010-1|AAD03022.1| 449|Caenorhabditis elegans
UDP-N-acetylglucosamine:a-3-D-mannosideb-1,
2-N-acetylglucosaminyltransferase I protein.
Length = 449
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -2
Query: 524 FFSNSLAA*IPSQVEANLXKI-LSFLIPCSANKLINLIAFAMLASLSNDNLAS 369
FFS LA + N KI L +L+P + K NL LS DN+AS
Sbjct: 316 FFSKHLAKIKVNDKYINFGKIDLDYLLPANFAKKTNLEVMKEAVELSIDNVAS 368
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 878 AGGGAXGGEXXEXXGGGDGXGAXAG 804
A GGA G GGG G GA AG
Sbjct: 350 AAGGAGGAGGYSGGGGGGGGGAAAG 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,864,276
Number of Sequences: 27780
Number of extensions: 337988
Number of successful extensions: 2409
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2101
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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