Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H06
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 51 1e-06
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 51 1e-06
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 51 1e-06
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 40 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.014
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.014
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 36 0.055
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 35 0.073
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.073
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.073
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.073
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.096
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.29
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.29
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 32 0.51
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.51
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.51
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.51
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 32 0.51
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.68
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.68
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.90
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.90
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.90
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.90
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen pro... 31 1.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 31 1.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 1.6
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 30 2.1
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 30 2.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.7
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 30 2.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.6
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.6
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 4.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.8
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 29 4.8
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.3
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 6.3
AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical ... 29 6.3
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 29 6.3
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 6.3
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 29 6.3
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 6.3
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 6.3
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.3
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.3
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 28 8.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 51.2 bits (117), Expect = 1e-06
Identities = 35/110 (31%), Positives = 35/110 (31%)
Frame = +3
Query: 603 GGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXX 782
GG GPP P P G GG P PPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP--------------- 745
Query: 783 RPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGPXXFF 932
P P P GG P P PPGG PP P F PPP P F
Sbjct: 746 -PPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 28.7 bits (61), Expect = 6.3
Identities = 32/111 (28%), Positives = 33/111 (29%)
Frame = +3
Query: 333 LKXILFGPPXFPXXXPXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAX 512
L I GPP P P G PPP G PP+ G PP PP
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPPPPGG------LPPI-------TGGPP----PPPPP 748
Query: 513 XXXXXXXGGRXXPXXKKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPG 665
GG P P GG F G P PP PG
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--------FKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 51.2 bits (117), Expect = 1e-06
Identities = 35/110 (31%), Positives = 35/110 (31%)
Frame = +3
Query: 603 GGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXX 782
GG GPP P P G GG P PPPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP--------------- 745
Query: 783 RPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGPXXFF 932
P P P GG P P PPGG PP P F PPP P F
Sbjct: 746 -PPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 28.7 bits (61), Expect = 6.3
Identities = 32/111 (28%), Positives = 33/111 (29%)
Frame = +3
Query: 333 LKXILFGPPXFPXXXPXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAX 512
L I GPP P P G PPP G PP+ G PP PP
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPPPPGG------LPPI-------TGGPP----PPPPP 748
Query: 513 XXXXXXXGGRXXPXXKKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPG 665
GG P P GG F G P PP PG
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--------FKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 51.2 bits (117), Expect = 1e-06
Identities = 35/110 (31%), Positives = 35/110 (31%)
Frame = +3
Query: 603 GGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXX 782
GG GPP P P G GG P PPPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP--------------- 328
Query: 783 RPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGPXXFF 932
P P P GG P P PPGG PP P F PPP P F
Sbjct: 329 -PPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 28.7 bits (61), Expect = 6.3
Identities = 32/111 (28%), Positives = 33/111 (29%)
Frame = +3
Query: 333 LKXILFGPPXFPXXXPXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAX 512
L I GPP P P G PPP G PP+ G PP PP
Sbjct: 289 LPPITGGPPPPPGLPPITGGPPPPPPPGG------LPPI-------TGGPP----PPPPP 331
Query: 513 XXXXXXXGGRXXPXXKKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPG 665
GG P P GG F G P PP PG
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGG--------FKGGPPPPPPPG 374
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/97 (28%), Positives = 29/97 (29%), Gaps = 2/97 (2%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP P PG G GG PP P G RP P
Sbjct: 159 GPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRPGDDAPSEPL 218
Query: 816 XGGXPXPXLPPG--GXXXPPXXPXXXXFXXXPPPRGP 920
G P P PPG G P P P +GP
Sbjct: 219 IPGEPGPQGPPGPPGQAGPDGQPGAPGGPGTPGSKGP 255
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.014
Identities = 32/98 (32%), Positives = 32/98 (32%), Gaps = 7/98 (7%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXG-XXXXXXTXXXXXRPXPXFFFXPX 815
PP PP PG G PP PPPP G P P F P
Sbjct: 274 PPPMPPTPGMT-PRPPPPPSSGMWPP---PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 329
Query: 816 XGGXPXPXLP----PGG--XXXPPXXPXXXXFXXXPPP 911
GG P P P PGG PP P PPP
Sbjct: 330 MGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/97 (24%), Positives = 26/97 (26%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXX 818
PP PP P G P PPPP G P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTP--RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
Query: 819 GGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGPXXF 929
P PPG PP P + PP P +
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY 355
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.5 bits (83), Expect = 0.014
Identities = 32/98 (32%), Positives = 32/98 (32%), Gaps = 7/98 (7%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXG-XXXXXXTXXXXXRPXPXFFFXPX 815
PP PP PG G PP PPPP G P P F P
Sbjct: 284 PPPMPPTPGMT-PRPPPPPSSGMWPP---PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPG 339
Query: 816 XGGXPXPXLP----PGG--XXXPPXXPXXXXFXXXPPP 911
GG P P P PGG PP P PPP
Sbjct: 340 MGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 33.1 bits (72), Expect = 0.29
Identities = 24/97 (24%), Positives = 26/97 (26%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXX 818
PP PP P G P PPPP G P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTP--RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
Query: 819 GGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGPXXF 929
P PPG PP P + PP P +
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRY 365
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 35.5 bits (78), Expect = 0.055
Identities = 28/99 (28%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Frame = -3
Query: 916 PRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPXX 737
P GG G G PG G P GK + G R P
Sbjct: 211 PSFGGGVGAPGAPGP-AGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGN 269
Query: 736 GG---GGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGPXN 629
G GG G PP AP PG G G P N
Sbjct: 270 NGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGN 308
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.1 bits (77), Expect = 0.073
Identities = 50/212 (23%), Positives = 59/212 (27%), Gaps = 8/212 (3%)
Frame = +3
Query: 318 AXPPXLKXILFGPPXFPXXXPXGGFPPPKXXXXGEKXXLKTPPLXXRK------IXXXG- 476
A PP I P P F PP ++ PP+ + G
Sbjct: 228 AIPPPNATIPSFPTSNAASPPVQEFAPPPPQQQQQQFQAPPPPMASHSSISSTPVQQQGF 287
Query: 477 APPX-FXXPPXAXXXXXXXXGGRXXPXXKKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXP 653
APP F PP + GG P ++ G P+ G GPP
Sbjct: 288 APPQQFGGPPPSGPPSEY--GGYAPPQQQQQQF--GAPPPQGAPQQGFGAPP-QGPPQGG 342
Query: 654 PXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPX 833
P G+ GA PPPP P F P G P
Sbjct: 343 PPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGA-FAPPPSAFGAPQ 401
Query: 834 PXLPPGGXXXPPXXPXXXXFXXXPPPRGPXXF 929
PGG PP PP GP F
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGF 433
Score = 33.5 bits (73), Expect = 0.22
Identities = 29/110 (26%), Positives = 30/110 (27%)
Frame = +3
Query: 348 FGPPXFPXXXPXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAXXXXXX 527
FG P P G F PP G PP G P + PP
Sbjct: 364 FGGPPPPVSSAPGNFAPPPQS--GPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPG 421
Query: 528 XXGGRXXPXXKKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXGA 677
G G P GG G PP P PGA GA
Sbjct: 422 SYG-------PPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGA 464
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.073
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Frame = +3
Query: 651 PPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXP 830
PP P A G+ PP PPPP G P P P G P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP-RGSPPTGSLP 313
Query: 831 XPXL----PPGGXXXPPXXP 878
P PP G PP P
Sbjct: 314 PPQAGGSPPPAGTGSPPPPP 333
Score = 29.9 bits (64), Expect = 2.7
Identities = 33/122 (27%), Positives = 36/122 (29%), Gaps = 2/122 (1%)
Frame = +3
Query: 378 PXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAXXXXXXXXGGRXXPXX 557
P G PPP G +PPL G+PP PP A G P
Sbjct: 232 PPAGSPPPPPPPKG------SPPLAGS-----GSPPP---PPAAGSPPPPRTGSPPPPPT 277
Query: 558 KKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPP--XXXPP 731
G P GG + PP PP GG PP PP
Sbjct: 278 -------GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Query: 732 PP 737
PP
Sbjct: 331 PP 332
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.073
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Frame = +3
Query: 651 PPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXP 830
PP P A G+ PP PPPP G P P P G P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP-RGSPPTGSLP 334
Query: 831 XPXL----PPGGXXXPPXXP 878
P PP G PP P
Sbjct: 335 PPQAGGSPPPAGTGSPPPPP 354
Score = 29.9 bits (64), Expect = 2.7
Identities = 33/122 (27%), Positives = 36/122 (29%), Gaps = 2/122 (1%)
Frame = +3
Query: 378 PXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAXXXXXXXXGGRXXPXX 557
P G PPP G +PPL G+PP PP A G P
Sbjct: 253 PPAGSPPPPPPPKG------SPPLAGS-----GSPPP---PPAAGSPPPPRTGSPPPPPT 298
Query: 558 KKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPP--XXXPP 731
G P GG + PP PP GG PP PP
Sbjct: 299 -------GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Query: 732 PP 737
PP
Sbjct: 352 PP 353
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.073
Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Frame = +3
Query: 651 PPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXP 830
PP P A G+ PP PPPP G P P P G P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP-RGSPPTGSLP 319
Query: 831 XPXL----PPGGXXXPPXXP 878
P PP G PP P
Sbjct: 320 PPQAGGSPPPAGTGSPPPPP 339
Score = 29.9 bits (64), Expect = 2.7
Identities = 33/122 (27%), Positives = 36/122 (29%), Gaps = 2/122 (1%)
Frame = +3
Query: 378 PXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAXXXXXXXXGGRXXPXX 557
P G PPP G +PPL G+PP PP A G P
Sbjct: 238 PPAGSPPPPPPPKG------SPPLAGS-----GSPPP---PPAAGSPPPPRTGSPPPPPT 283
Query: 558 KKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPP--XXXPP 731
G P GG + PP PP GG PP PP
Sbjct: 284 -------GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Query: 732 PP 737
PP
Sbjct: 337 PP 338
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.096
Identities = 41/173 (23%), Positives = 48/173 (27%)
Frame = +3
Query: 351 GPPXFPXXXPXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAXXXXXXX 530
G P GG PPP+ + PP+ G PP PP
Sbjct: 1455 GMPPLGMMRGRGGPPPPRGMNSPMRGM--PPPMRGGGPPMRGGPPMRGGPPMFRGGPPGP 1512
Query: 531 XGGRXXPXXKKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXX 710
G P + + G P+ GGG G + P G GG
Sbjct: 1513 GRGMPSPMMRGSSMRGGF--PQRGGGPGMGPSQYYHDSPQNRGPPMGGLPPPH---GGMN 1567
Query: 711 PPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPP 869
PPPP G P P P G P P PP PP
Sbjct: 1568 GWRGGPPPPRGGSHCQG--------PPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.29
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +1
Query: 319 PPXPX*RXYCLAPP--XSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXG-GPPPX 489
PP P Y + PP PP FPP G+ PPP G GPP
Sbjct: 278 PPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRG---MPPPFMPPPPHFGMGPPRG 334
Query: 490 XXXPPXP 510
PP P
Sbjct: 335 FMPPPHP 341
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.29
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Frame = +1
Query: 319 PPXPX*RXYCLAPP--XSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXG-GPPPX 489
PP P Y + PP PP FPP G+ PPP G GPP
Sbjct: 278 PPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRG---MPPPFMPPPPHFGMGPPRG 334
Query: 490 XXXPPXP 510
PP P
Sbjct: 335 FMPPPHP 341
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.51
Identities = 27/95 (28%), Positives = 29/95 (30%)
Frame = -3
Query: 919 GPRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPX 740
GP G G G G P G G G P G ++ G G P
Sbjct: 178 GPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEP---GASEQGGPGEPGPAG-PPGPAGPA 232
Query: 739 XGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGP 635
G GG P A APG G GGP
Sbjct: 233 GNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/109 (26%), Positives = 30/109 (27%), Gaps = 2/109 (1%)
Frame = +3
Query: 600 GGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXX 779
GGGGG GPP PG G G P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP------CEPVTQPP 146
Query: 780 XRPXPXFFFXPXXGGXPXPXLPPG--GXXXPPXXPXXXXFXXXPPPRGP 920
+P P P G P PPG G P P P P GP
Sbjct: 147 CQPCPG--GPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 32.3 bits (70), Expect = 0.51
Identities = 26/93 (27%), Positives = 26/93 (27%), Gaps = 4/93 (4%)
Frame = +3
Query: 600 GGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXX 779
G GG K G P P PGA G PP P G T
Sbjct: 123 GPGGRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEP 182
Query: 780 XRPXPXFF----FXPXXGGXPXPXLPPGGXXXP 866
P P P G P P PPG P
Sbjct: 183 GGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQP 215
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.3 bits (70), Expect = 0.51
Identities = 27/95 (28%), Positives = 29/95 (30%)
Frame = -3
Query: 919 GPRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPX 740
GP G G G G P G G G P G ++ G G P
Sbjct: 178 GPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEP---GASEQGGPGEPGPAG-PPGPAGPA 232
Query: 739 XGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGP 635
G GG P A APG G GGP
Sbjct: 233 GNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/109 (26%), Positives = 30/109 (27%), Gaps = 2/109 (1%)
Frame = +3
Query: 600 GGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXX 779
GGGGG GPP PG G G P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP------CEPVTQPP 146
Query: 780 XRPXPXFFFXPXXGGXPXPXLPPG--GXXXPPXXPXXXXFXXXPPPRGP 920
+P P P G P PPG G P P P P GP
Sbjct: 147 CQPCPG--GPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 32.3 bits (70), Expect = 0.51
Identities = 27/95 (28%), Positives = 29/95 (30%)
Frame = -3
Query: 919 GPRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPX 740
GP G G G G P G G G P G ++ G G P
Sbjct: 178 GPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEP---GASEQGGPGEPGPAG-PPGPAGPA 232
Query: 739 XGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGP 635
G GG P A APG G GGP
Sbjct: 233 GNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/109 (26%), Positives = 30/109 (27%), Gaps = 2/109 (1%)
Frame = +3
Query: 600 GGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXX 779
GGGGG GPP PG G G P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP------CEPVTQPP 146
Query: 780 XRPXPXFFFXPXXGGXPXPXLPPG--GXXXPPXXPXXXXFXXXPPPRGP 920
+P P P G P PPG G P P P P GP
Sbjct: 147 CQPCPG--GPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.51
Identities = 27/95 (28%), Positives = 29/95 (30%)
Frame = -3
Query: 919 GPRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPX 740
GP G G G G P G G G P G ++ G G P
Sbjct: 178 GPSGPGPAGPPGPAGPAGNDGAP-GAPGGPGEP---GASEQGGPGEPGPAG-PPGPAGPA 232
Query: 739 XGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGP 635
G GG P A APG G GGP
Sbjct: 233 GNDGAPGTGGPGPAGPKGPPGAAGAPGADGNPGGP 267
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/109 (26%), Positives = 30/109 (27%), Gaps = 2/109 (1%)
Frame = +3
Query: 600 GGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXX 779
GGGGG GPP PG G G P P
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAP------CEPVTQPP 146
Query: 780 XRPXPXFFFXPXXGGXPXPXLPPG--GXXXPPXXPXXXXFXXXPPPRGP 920
+P P P G P PPG G P P P P GP
Sbjct: 147 CQPCPG--GPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGP 193
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 32.3 bits (70), Expect = 0.51
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +2
Query: 476 GPPXFXXXPRGPGFXXXXXXGAXXPXGKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXP 655
G P P PG G P G+ PP + G GG G P
Sbjct: 182 GQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSG 241
Query: 656 XPGGGG 673
PG G
Sbjct: 242 QPGHSG 247
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 591 PKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPP 734
P G GG + GP P PG G GG P PP
Sbjct: 190 PGNPGRGGQRSRGLPGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPP 237
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/98 (26%), Positives = 28/98 (28%), Gaps = 3/98 (3%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPP---PPFXGXXXXXXTXXXXXRPXPXFFF 806
GPP P G G GG PP P G + R
Sbjct: 143 GPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRG 202
Query: 807 XPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
P G P P P GG P P P P+GP
Sbjct: 203 LPGPSGRPGPPGPAGG----PGQPGHSGGAGSPGPQGP 236
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/95 (25%), Positives = 27/95 (28%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP PG+ G G P PP G + P P
Sbjct: 160 GPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPG 219
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
G P PPG P P P P+GP
Sbjct: 220 PPGEAGPQGPPGS----PGQPGADGSPGQPGPKGP 250
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/95 (25%), Positives = 27/95 (28%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP PG+ G G P PP G + P P
Sbjct: 160 GPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPGEPG 219
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
G P PPG P P P P+GP
Sbjct: 220 PPGEAGPQGPPGS----PGQPGADGSPGQPGPKGP 250
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.90
Identities = 25/95 (26%), Positives = 25/95 (26%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP P PG G P PP G P P
Sbjct: 159 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPG 218
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
G P PPG PP P P P GP
Sbjct: 219 APGEPGDSGPPG----PPGPPGAPGNDGPPGPPGP 249
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = -2
Query: 659 GGGXXGGXXKXFFXXPPPPPXFWXXXPXGXXVFFXXGXXSPPXXXXXXXXGXGGXXKXGG 480
GGG GG PPP P G G PP G GG GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Query: 479 GPPXXNFSXXKGGG 438
G GGG
Sbjct: 95 GGCGGGGGCGGGGG 108
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = -2
Query: 659 GGGXXGGXXKXFFXXPPPPPXFWXXXPXGXXVFFXXGXXSPPXXXXXXXXGXGGXXKXGG 480
GGG GG PPP P G G PP G GG GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Query: 479 GPPXXNFSXXKGGG 438
G GGG
Sbjct: 95 GGCGGGGGCGGGGG 108
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 0.90
Identities = 25/95 (26%), Positives = 25/95 (26%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP P PG G P PP G P P
Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPG 213
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
G P PPG PP P P P GP
Sbjct: 214 APGEPGDSGPPG----PPGPPGAPGNDGPPGPPGP 244
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 0.90
Identities = 25/95 (26%), Positives = 25/95 (26%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP P PG G P PP G P P
Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPG 213
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
G P PPG PP P P P GP
Sbjct: 214 APGEPGDSGPPG----PPGPPGAPGNDGPPGPPGP 244
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.5 bits (68), Expect = 0.90
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXX-GKXXX*KPPPLXXEKXXXGGPPP 486
PP P Y APP PPGV PP + G PPP+ + G PPP
Sbjct: 707 PPPPGIPGYPPAPP-----PPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPP 758
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/98 (24%), Positives = 27/98 (27%), Gaps = 2/98 (2%)
Frame = -3
Query: 916 PRGGGXXXKXXXXGXXGGXXXP--PGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXP 743
P GG G G P G G P G++ + G P
Sbjct: 160 PAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAP 219
Query: 742 XXGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGPXN 629
G G G PP P PG G G P N
Sbjct: 220 GQPGSGSTPGPAGPPGPPGPNGQPGHPGQDGQPGAPGN 257
>AF047656-13|AAC05105.1| 313|Caenorhabditis elegans Collagen
protein 116 protein.
Length = 313
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/77 (25%), Positives = 21/77 (27%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP G G G PP PP + G P F P
Sbjct: 166 GPPGYEGQMGVPGLPGDGPTPGSPGPPGPPGPPGYPGRQGCQGKDGPSGDPGLRFIKTPG 225
Query: 816 XGGXPXPXLPPGGXXXP 866
G P PPG P
Sbjct: 226 PVGAAGPPGPPGPPGSP 242
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 569 PXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGGR 676
P G GGG GG PP P GGGGR
Sbjct: 188 PGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGR 223
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/96 (28%), Positives = 27/96 (28%), Gaps = 6/96 (6%)
Frame = -3
Query: 907 GGXXXKXXXXGXXGGXXXPP------GGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXX 746
GG G GG PP GG G G G G G
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGG 96
Query: 745 PXXGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGG 638
GGGG GG PP G GG GG
Sbjct: 97 GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGG 132
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 3/99 (3%)
Frame = -3
Query: 916 PRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPXX 737
P GG G G P G G P GK + G G P
Sbjct: 162 PAQGGGQGPPGPPGPAGSAGSP-GQAGAPGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGA 220
Query: 736 GG---GGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGPXN 629
G G G PP P PG G G P N
Sbjct: 221 PGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGN 259
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 3/99 (3%)
Frame = -3
Query: 916 PRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPXX 737
P GG G G P G G P GK + G G P
Sbjct: 162 PAQGGGQGPPGPPGPAGSAGSP-GQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGA 220
Query: 736 GG---GGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGPXN 629
G G G PP P PG G G P N
Sbjct: 221 PGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPGN 259
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/77 (25%), Positives = 21/77 (27%)
Frame = -3
Query: 865 GXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXXVXXXXXXPXXGGGGXXXGGXLPPXXXX 686
G PG G G P GK + G G GG G P
Sbjct: 191 GNNGAPGAAGGPGQPGRPGKDGQRGKGSAGAPGAPGKAGPAGPAGGPGNNGSAGTPGPAG 250
Query: 685 XXXAPXAPGXGGXXGGP 635
P PG G G P
Sbjct: 251 PAGNPGTPGNKGSDGHP 267
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = +2
Query: 500 PRGPGFXXXXXXGAXXPXGKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGG 673
P PG G P G PP G GG G G P PG G
Sbjct: 203 PGAPGKDGEKGKGEPGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAG 260
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = +3
Query: 579 GXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXG 746
G P GGGGG P PP P G PP PPPP G
Sbjct: 17 GFLFPMAGGGGGGGGCAPAAPACAPPPPPMCGC---------APPPPPPPPPPMCG 63
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 436 KPPPLXXEKXXXGGPPP 486
+PPPL EK GGPPP
Sbjct: 209 RPPPLSHEKLVIGGPPP 225
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 436 KPPPLXXEKXXXGGPPP 486
+PPPL EK GGPPP
Sbjct: 188 RPPPLSHEKLVIGGPPP 204
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +3
Query: 726 PPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPP---GGXXXPPXXP 878
PPPP G T P P G P P PP GG PP P
Sbjct: 543 PPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 668 RPRGGGXXGGXXKXFFXXPPPPP 600
RP GGG GG + PPPPP
Sbjct: 79 RPYGGGGGGGYGRPQGYVPPPPP 101
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 566 PPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXP 661
PP G GGGGGG G P P P
Sbjct: 71 PPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPP 102
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/95 (26%), Positives = 28/95 (29%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GPP PG+ G G P PP G + R P P
Sbjct: 160 GPPGDSGEPGSPGLPGQDAAPGEPGPKGPKGPPGAPGAPEHQES-QECPRGEPLIPGEPG 218
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
G P PPG P P P P+GP
Sbjct: 219 PPGEAGPQGPPGS----PGQPGADGSPGQPGPKGP 249
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +3
Query: 636 GPPXXPPXPG--AXGAXXXXXXXGGXXPPXXXPPPP 737
GPP PP P GA G PP PPPP
Sbjct: 550 GPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPP 585
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 843 PPGGXXXPPXXPXXXXFXXXPPPRG 917
PPGG PP P + PPP G
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPG 697
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 843 PPGGXXXPPXXPXXXXFXXXPPPRG 917
PPGG PP P + PPP G
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPG 697
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +2
Query: 476 GPPXFXXXPRGPGFXXXXXXGAXXPXGKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXP 655
G P P PG G+ P G + PP + G GGGG + G P
Sbjct: 243 GHPGDAGAPGAPG-QVVAGPGSVGPPGPQGPPGLAGPDGQPGHGGGG-QPGPQGPPGDDG 300
Query: 656 XPGGGG 673
PG G
Sbjct: 301 HPGEDG 306
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/71 (30%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = +3
Query: 711 PPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXX 890
P PPPP G P P P GG P P P G PP P
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPP----PMMGGIPPPP-PMFGAPPPPPPPSGLG 124
Query: 891 FXXXPP-PRGP 920
PP P+ P
Sbjct: 125 VAPQPPRPKTP 135
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/80 (28%), Positives = 23/80 (28%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXX 818
P P P G GG PP PP F G P P F
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPP----PPMFAGGIPPPPPMMGGIPPPPPMF----- 111
Query: 819 GGXPXPXLPPGGXXXPPXXP 878
G P P PP G P P
Sbjct: 112 -GAPPPPPPPSGLGVAPQPP 130
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 786 PXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPP 911
P P FF P P PPG PP P PPP
Sbjct: 59 PKPSFFIPPPVPNGFIPP-PPGPGGIPPPPPMFAGGIPPPPP 99
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.1 bits (62), Expect = 4.8
Identities = 25/98 (25%), Positives = 27/98 (27%), Gaps = 1/98 (1%)
Frame = -3
Query: 919 GPRGGGXXXKXXXXGXXGGXXXPPGGRXGXGXPPXXGKKKKXG-XGRXXXXXVXXXXXXP 743
GPRG G PPG G G P G + G GR
Sbjct: 151 GPRGPPGEVGPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPGNPGRPGPAGPRGEPGTE 210
Query: 742 XXGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGPXN 629
G G P P +PG G G P N
Sbjct: 211 YKPGQPGRPGPPGPRGEAGPAGQPGSPGNDGESGKPGN 248
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/113 (25%), Positives = 29/113 (25%), Gaps = 6/113 (5%)
Frame = +3
Query: 600 GGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPP----XXXPPPPFXGXXXXXXT 767
G GG K G P P PGA G PP PP P
Sbjct: 113 GPGGSPGKPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCPAGPPGPPGPDGPAGPA 172
Query: 768 XXXXXRPXPXFFFXPXXGGXPXPXLPPG--GXXXPPXXPXXXXFXXXPPPRGP 920
P P G P P P G G P P P GP
Sbjct: 173 GPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAGESTYPEPAGP 225
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GP PGA G GG PP PP P G P P
Sbjct: 116 GPAGPAGNPGADGDAGSPGEAGGAGPP--GPPGP-DGNPGAPGNDGEAGSPGTRSISSPG 172
Query: 816 XGGXPXPXLPPGGXXXP 866
G P PPG P
Sbjct: 173 PAGPAGPPGPPGPDGAP 189
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +2
Query: 578 GAXXXKXGGGGGGXKKXIXGXPP---XXPXPGGGG 673
G + GGGGGG + I G P P P GGG
Sbjct: 68 GNAYRRNGGGGGGGGRNIGGLPTSSGVAPPPMGGG 102
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
GP PGA G GG PP PP P G P P
Sbjct: 116 GPAGPAGNPGADGDAGSPGEAGGAGPP--GPPGP-DGNPGAPGNDGEAGSPGTRSISSPG 172
Query: 816 XGGXPXPXLPPGGXXXP 866
G P PPG P
Sbjct: 173 PAGPAGPPGPPGPDGAP 189
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 554 GKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGGR 676
G+ + G GGGGG G P PGGGG+
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 249
>AL033514-8|CAA22097.2| 715|Caenorhabditis elegans Hypothetical
protein Y75B8A.8 protein.
Length = 715
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 579 GXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXG 674
G P GG GG GPP PP P G
Sbjct: 6 GPGGPMYGGAGGGGGGPPRGPPQQPPQPQGGG 37
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 554 GKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGGR 676
G+ + G GGGGG G P PGGGG+
Sbjct: 171 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 211
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 554 GKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGGR 676
G+ + G GGGGG G P PGGGG+
Sbjct: 171 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 211
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 554 GKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGGR 676
G+ + G GGGGG G P PGGGG+
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 249
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 554 GKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGGR 676
G+ + G GGGGG G P PGGGG+
Sbjct: 209 GRSRDGQRGGYNGGGGGGGGWGGPAQRGGPGAYGGPGGGGQ 249
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/66 (25%), Positives = 19/66 (28%)
Frame = +2
Query: 476 GPPXFXXXPRGPGFXXXXXXGAXXPXGKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXP 655
G P P PG G P G+ P + G GG G P
Sbjct: 189 GQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPG 248
Query: 656 XPGGGG 673
PG G
Sbjct: 249 HPGQAG 254
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.3
Identities = 26/106 (24%), Positives = 30/106 (28%), Gaps = 9/106 (8%)
Frame = -3
Query: 919 GPRGGGXXXKXXXXGXXGGXXXPPG--------GRXGX-GXPPXXGKKKKXGXGRXXXXX 767
G GGG G G PPG G+ G G P G+ G+
Sbjct: 119 GGGGGGCHCAAQASGCPAGPPGPPGEAGTDGEPGQAGQDGQPGQAGQADSGSSGQACITC 178
Query: 766 VXXXXXXPXXGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGPXN 629
P G G P +P PG G G P N
Sbjct: 179 PAGPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGN 224
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Frame = +3
Query: 549 PXXKKNXXXXGXXXP-KXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGG 704
P + N G P K G GPP PP P + GA GG
Sbjct: 503 PPPRNNGNNNGNGRPMKPPSSSGSGSNRRSGPPPPPPPPRSSGANGNRNGGGG 555
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 28.3 bits (60), Expect = 8.3
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Frame = -3
Query: 868 GGXXXPPGGRXGXGXPPXXGKKKKXGX-GRXXXXXVXXXXXXPXXGG-----GGXXXGGX 707
GG PPG G P G+ G G P G G GG
Sbjct: 148 GGPPGPPGQDGIPGNPGRNGEDGAPGPQGPSGPPGPPGQPGQPGQRGPPGEPGALLPGGD 207
Query: 706 LPPXXXXXXXAPXAPGXGGXXGGP 635
PP P APG G G P
Sbjct: 208 APPGPSGPPGRPGAPGQPGKAGSP 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,372,231
Number of Sequences: 27780
Number of extensions: 402236
Number of successful extensions: 1942
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1585
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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