Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H06
(936 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g04170.1 68415.m00402 meprin and TRAF homology domain-contain... 36 0.029
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 34 0.12
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 33 0.21
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 33 0.27
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 33 0.27
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.27
At1g61080.1 68414.m06877 proline-rich family protein 33 0.27
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 32 0.48
At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associa... 32 0.48
At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associa... 32 0.48
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 32 0.63
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 32 0.63
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 31 1.1
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 31 1.5
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 30 1.9
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 30 1.9
At4g03120.1 68417.m00425 proline-rich family protein similar to ... 30 2.5
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 30 2.5
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 29 3.4
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 29 3.4
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 25 3.8
At2g30560.1 68415.m03722 glycine-rich protein 29 4.4
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 29 5.9
>At2g04170.1 68415.m00402 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to NtN2 [Medicago truncatula] GI:3776084; contains Pfam
profile PF00917: MATH domain
Length = 420
Score = 36.3 bits (80), Expect = 0.029
Identities = 25/67 (37%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +2
Query: 476 GPPXFXXXPRGPGFXXXXXXGAXXPXGKKKP-PXXGAXXXKXGGGGGGXKKXIXGXPPXX 652
GP P GPGF G G + P P G + GGGGG G P
Sbjct: 41 GPGGPGFGPGGPGFGGRGPRGPGF--GPRGPGPWSGPRGPRPGGGGGPGPGPWSG--PRG 96
Query: 653 PXPGGGG 673
P PGGGG
Sbjct: 97 PRPGGGG 103
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 34.3 bits (75), Expect = 0.12
Identities = 40/197 (20%), Positives = 45/197 (22%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
PP P Y PP PP V PP PPP PPP
Sbjct: 441 PPPPPPPVYSPPPPPPPPPPPPVYSPP------------PPPPPPPPPPPVYSPPPPSPP 488
Query: 499 PPXPXXXXXXXXGGEXXPXXKKTXXPXGXXXQXXGGGGGXKKKXFXXPPXXPPPRGRXAR 678
PP P P + P + P PPP
Sbjct: 489 PPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPP 548
Query: 679 XFXXXXXXEXXXPFXXPPPXXXGXXXXXXXXXXXXAPPPFFFFXXXPGXXPXLXSPRGGX 858
F + PPP PP + + P P P
Sbjct: 549 QFSPPPPEPYY--YSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPV 606
Query: 859 XXPPXHXXXXXXXXPPP 909
PP PPP
Sbjct: 607 YSPPPPPPCIEPPPPPP 623
Score = 33.5 bits (73), Expect = 0.21
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 711 PPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXX 890
PP PPPP P P + P P P PP PP P
Sbjct: 433 PPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPP 492
Query: 891 FXXXPPPRGP 920
PPP P
Sbjct: 493 PVYSPPPPPP 502
Score = 32.3 bits (70), Expect = 0.48
Identities = 23/91 (25%), Positives = 24/91 (26%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXX 818
PP PP P PP PPPP P P + P
Sbjct: 427 PPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVY--SPPP 484
Query: 819 GGXPXPXLPPGGXXXPPXXPXXXXFXXXPPP 911
P P P PP P PPP
Sbjct: 485 PSPPPPPPPVYSPPPPPPPPPPPPVYSPPPP 515
Score = 31.9 bits (69), Expect = 0.63
Identities = 38/188 (20%), Positives = 44/188 (23%), Gaps = 2/188 (1%)
Frame = +3
Query: 354 PPXFPXXXPXGGFPPPKXXXXGEKXXLKTPPLXXRKIXXXGAPPXFXXPPXAXXXXXXXX 533
PP P P PPP +PP + PP PP
Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPV 517
Query: 534 GGRXXPXXKKNXXXXGXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXP 713
P P F PP P + P
Sbjct: 518 YSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPP 577
Query: 714 PXXXPPP--PFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXX 887
P PPP P+ T P P + P P PP PP P
Sbjct: 578 PHSPPPPIYPYLSPPPPP-TPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVV 636
Query: 888 XFXXXPPP 911
+ PPP
Sbjct: 637 HYSSPPPP 644
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 786 PXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
P P F P P P PP PP P PPP P
Sbjct: 413 PAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPP 457
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 33.5 bits (73), Expect = 0.21
Identities = 32/110 (29%), Positives = 34/110 (30%), Gaps = 3/110 (2%)
Frame = +1
Query: 349 LAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXXPPXPXXXXXX 528
+ PP + PP PP K PPPL G PPP PP P
Sbjct: 674 VGPPSTPPPPPP---PPPKANISNAPKPPAPPPLPPSSTRLGAPPP---PPPPPLSKTP- 726
Query: 529 XXGGEXXPXXKKTXXPXGXXXQXXGGGGGXK---KKXFXXPPXXPPPRGR 669
P KT P G G K PP PPP GR
Sbjct: 727 ---APPPPPLSKTPVPPPPPGLGRGTSSGPPPLGAKGSNAPP-PPPPAGR 772
Score = 32.3 bits (70), Expect = 0.48
Identities = 24/93 (25%), Positives = 25/93 (26%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXX 818
PP PP P + PP PPPP P P
Sbjct: 658 PPPPPPPPTSHSGSIRVG------PPSTPPPPPPPPPKANISNAPKPPAPPPLPPSSTRL 711
Query: 819 GGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRG 917
G P P PP P P PPP G
Sbjct: 712 GAPPPPPPPPLSKTPAPPPPPLSKTPVPPPPPG 744
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/94 (23%), Positives = 22/94 (23%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXX 818
PP PP P PP PPP F P P P
Sbjct: 595 PPPRPPPPPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPPPTRIPAA 654
Query: 819 GGXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGP 920
P P PP PPP P
Sbjct: 655 KCAPPPPPPPPTSHSGSIRVGPPSTPPPPPPPPP 688
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/92 (23%), Positives = 24/92 (26%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
G P P PG + G P PP F + P P
Sbjct: 325 GLPPLKPPPGRTASVLSGKSFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAG 384
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPP 911
P P PPG P P PPP
Sbjct: 385 PPRPPPPAPPPGSGGPKPPPPPGPKGPRPPPP 416
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +3
Query: 726 PPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXP 905
PPPP + RP P P G P P PPG P P
Sbjct: 370 PPPPVPAPQMP--SSAGPPRPPPPA--PPPGSGGPKPPPPPGPKGPRPPPPMSLGPKAPR 425
Query: 906 PPRGP 920
PP GP
Sbjct: 426 PPSGP 430
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 33.1 bits (72), Expect = 0.27
Identities = 22/92 (23%), Positives = 24/92 (26%)
Frame = +3
Query: 636 GPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPX 815
G P P PG + G P PP F + P P
Sbjct: 325 GLPPLKPPPGRTASVLSGKSFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAG 384
Query: 816 XGGXPXPXLPPGGXXXPPXXPXXXXFXXXPPP 911
P P PPG P P PPP
Sbjct: 385 PPRPPPPAPPPGSGGPKPPPPPGPKGPRPPPP 416
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +3
Query: 726 PPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXXFXXXP 905
PPPP + RP P P G P P PPG P P
Sbjct: 370 PPPPVPAPQMP--SSAGPPRPPPPA--PPPGSGGPKPPPPPGPKGPRPPPPMSLGPKAPR 425
Query: 906 PPRGP 920
PP GP
Sbjct: 426 PPSGP 430
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
PP P Y PP PP V PP PPP+ PPP
Sbjct: 670 PPPPV---YSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHS 726
Query: 499 PPXP 510
PP P
Sbjct: 727 PPPP 730
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
PP P + PP PP V PP PPP+ PPP
Sbjct: 677 PPPPV---HSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQS 733
Query: 499 PPXP 510
PP P
Sbjct: 734 PPPP 737
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = +1
Query: 352 APPXSLXXPPGVVF--PPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXXPPXP 510
+PP + PP V+ PP PPP+ PPP PP P
Sbjct: 662 SPPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPP 716
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 PXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPP-LXXEKXXXGGPPPXXXX 498
P P Y PP PP V PP PPP + PPP
Sbjct: 742 PPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHS 801
Query: 499 PPXP 510
PP P
Sbjct: 802 PPPP 805
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 33.1 bits (72), Expect = 0.27
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
PP P APP P PP + PPP+ GGPPP
Sbjct: 537 PPPPPPPGTAAAPPPPPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPP--P 594
Query: 499 PPXP 510
PP P
Sbjct: 595 PPMP 598
Score = 29.9 bits (64), Expect = 2.5
Identities = 26/94 (27%), Positives = 26/94 (27%)
Frame = +1
Query: 640 PPXXPPPRGRXARXFXXXXXXEXXXPFXXPPPXXXGXXXXXXXXXXXXAPPPFFFFXXXP 819
PP PPPR A P PPP G PPP P
Sbjct: 524 PPPPPPPRAAVAPPPPPPPPGTAAAP--PPPPPPPGTQAAPPPPP----PPPMQNRAPSP 577
Query: 820 GXXPXLXSPRGGXXXPPXHXXXXXXXXPPPXGXP 921
P S GG PP PPP P
Sbjct: 578 PPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPP 611
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/98 (26%), Positives = 26/98 (26%), Gaps = 4/98 (4%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXX 818
PP PP PG A G PPPP P P
Sbjct: 536 PPPPPPPPGTAAAPPPPPPPPGTQAAPPPPPPP--------PMQNRAPSPPPMPMGNSGS 587
Query: 819 GGXPXPXLP----PGGXXXPPXXPXXXXFXXXPPPRGP 920
GG P P P G PP P PP P
Sbjct: 588 GGPPPPPPPMPLANGATPPPPPPPMAMANGAAGPPPPP 625
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 32.3 bits (70), Expect = 0.48
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 6/104 (5%)
Frame = -3
Query: 928 KXXGPRGGGXXXKXXXXGXXG------GXXXPPGGRXGXGXPPXXGKKKKXGXGRXXXXX 767
K GP GGG G G G P G+ G G G K G
Sbjct: 322 KKGGPGGGGGNMGNQNQGGGGKNGGKGGGGHPLDGKMGGGGGGPNGNKGGGGVQMNGGPN 381
Query: 766 VXXXXXXPXXGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGP 635
GGGG G LPP G GG GGP
Sbjct: 382 GGKKGGGGGGGGGGGPMSGGLPPGFRPMG------GGGGGGGGP 419
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/69 (31%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
Frame = +2
Query: 476 GPPXFXXXPRGPGFXXXXXXGAXXPXGKKKPPXXGA---XXXKXGGGGGGXKKXIXGXPP 646
GP +G F G P GKK P G GGGG K G P
Sbjct: 295 GPAGGKIEGKGMPFPVQMGGGGGGPGGKKGGPGGGGGNMGNQNQGGGGKNGGKGGGGHPL 354
Query: 647 XXPXPGGGG 673
GGGG
Sbjct: 355 DGKMGGGGG 363
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 599 GGGGGGXKKXIXGXPPXXPXPGGGG 673
GGGGGG G PP GGGG
Sbjct: 389 GGGGGGGGPMSGGLPPGFRPMGGGG 413
>At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 32.3 bits (70), Expect = 0.48
Identities = 36/132 (27%), Positives = 38/132 (28%), Gaps = 6/132 (4%)
Frame = +3
Query: 537 GRXXPXXKKNXXXXGXXXPKXGGGG---GXXKKXFXGPPXX--PPXPGAXGAXXXXXXXG 701
GR P G P G GG G + PP PP G G
Sbjct: 113 GRGVPTGPLVQAQPGLSGPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPPGQMLPPPPFG 172
Query: 702 GXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGG-XPXPXLPPGGXXXPPXXP 878
G PP PPP G RP P F P P +PP G P
Sbjct: 173 GQGPPMGRGPPPPYG-----------MRPPPQQFSGPPPPQYGQRPMIPPPGGMMRGPPP 221
Query: 879 XXXXFXXXPPPR 914
PPPR
Sbjct: 222 PPHGMQGPPPPR 233
>At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 32.3 bits (70), Expect = 0.48
Identities = 36/132 (27%), Positives = 38/132 (28%), Gaps = 6/132 (4%)
Frame = +3
Query: 537 GRXXPXXKKNXXXXGXXXPKXGGGG---GXXKKXFXGPPXX--PPXPGAXGAXXXXXXXG 701
GR P G P G GG G + PP PP G G
Sbjct: 113 GRGVPTGPLVQAQPGLSGPVRGVGGPAPGMMQPQISRPPQLSAPPIIRPPGQMLPPPPFG 172
Query: 702 GXXPPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGG-XPXPXLPPGGXXXPPXXP 878
G PP PPP G RP P F P P +PP G P
Sbjct: 173 GQGPPMGRGPPPPYG-----------MRPPPQQFSGPPPPQYGQRPMIPPPGGMMRGPPP 221
Query: 879 XXXXFXXXPPPR 914
PPPR
Sbjct: 222 PPHGMQGPPPPR 233
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
PP P + PP + P V FPP PPP+ PPP
Sbjct: 43 PPPPYRSPVTIPPPPPVYSRP-VAFPPPPPIYSPPPPPIYPPPIYSPPPPPIYPPPIYSP 101
Query: 499 PPXP 510
PP P
Sbjct: 102 PPTP 105
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.9 bits (69), Expect = 0.63
Identities = 27/108 (25%), Positives = 29/108 (26%), Gaps = 2/108 (1%)
Frame = +3
Query: 603 GGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPPFXGXXXXXXTXXXXX 782
GG PP P PG+ GG P P P T
Sbjct: 446 GGSPPSPSIVPSPPSTTPSPGSPPTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGG 505
Query: 783 RPXPXFFFXPXXGG-XPXPXLPPGGXXXPPXXPXXXXFXXXPP-PRGP 920
P P P GG P P + P P P PP P P
Sbjct: 506 SP-PSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSP 552
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 PXPX*RXYCLAPPXSLXXPPGVVF-PPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
P P Y PP + PP V PP PPP+ PPP
Sbjct: 527 PPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYS 586
Query: 499 PPXP 510
PP P
Sbjct: 587 PPPP 590
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
PP P P S PP V PP PPP+ PPP
Sbjct: 520 PPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHS 579
Query: 499 PPXP 510
PP P
Sbjct: 580 PPPP 583
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 20/63 (31%)
Frame = +1
Query: 322 PXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXXP 501
P P Y PP + PP PP PPP+ PPP P
Sbjct: 518 PPPPPPVYSPPPPPPVYSPP----PPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSP 573
Query: 502 PXP 510
P P
Sbjct: 574 PPP 576
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXX 498
PP P Y PP + PP PP PPP+ PPP
Sbjct: 510 PPPPP--VYSPPPPPPVYSPPPP--PPVYSPPPPPPVHSPPPPVHSPPPPVHSPPPPVHS 565
Query: 499 PPXP 510
PP P
Sbjct: 566 PPPP 569
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/56 (28%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = +1
Query: 352 APPXSLXXPPGVVF---PPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXXPPXP 510
+PP + PP V+ PP PPP+ PPP PP P
Sbjct: 601 SPPPPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPPPP 656
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 579 GXXXPKXGGGGGXXKKXFXGPPXXPPXPGAXG 674
G P GGG GPP PP PGA G
Sbjct: 678 GPPPPPPPPGGGPPPPPGGGPPPPPPPPGALG 709
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 591 PKXGGGGGXXKKXFXGPPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPP 737
P+ GGG K P PP PG GG PP PPP
Sbjct: 656 PRSAGGG----KSTNLPSARPPLPGGGPPPPPPPPGGGPPPPPGGGPPP 700
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/67 (31%), Positives = 21/67 (31%)
Frame = +3
Query: 711 PPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXX 890
PP PPP P P GG P P PPGG PP P
Sbjct: 648 PPRVPRPPPRSAGGGKSTNLPSARPPLPG-------GGPPPPPPPPGG--GPPPPPGGGP 698
Query: 891 FXXXPPP 911
PPP
Sbjct: 699 PPPPPPP 705
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +2
Query: 641 PPXXPXPGGGGRXXXXSXXXXKXPXXXXPPPPXXXGXXXXXXXXXXXPPXP 793
P P GGG+ P PPPP G PP P
Sbjct: 652 PRPPPRSAGGGKSTNLPSARPPLPGGGPPPPPPPPGGGPPPPPGGGPPPPP 702
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = +3
Query: 711 PPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXPXXXX 890
PP PPPP T P P P P PP PP P
Sbjct: 54 PPPPPPPPPPPAVNMSVETGIPPPPPPVTDMIKPLSS--PPPPQPPPRSQPPPKPPQKNL 111
Query: 891 -FXXXPPPRGP 920
PPPR P
Sbjct: 112 PRRHPPPPRSP 122
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/63 (28%), Positives = 18/63 (28%)
Frame = +1
Query: 322 PXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXXP 501
P P Y PP PP PP PPP PPP P
Sbjct: 543 PSPPSPIYSPPPPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSP 602
Query: 502 PXP 510
P P
Sbjct: 603 PPP 605
>At4g03120.1 68417.m00425 proline-rich family protein similar to U1
small nuclear ribonucleoprotein C; contains proline rich
extensin domains, INTERPRO:IPR002965
Length = 207
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +1
Query: 349 LAPPXSLXXPP---GVVFPPXKXXXXGKXXX*KPPPLXXEKXXXGGPPPXXXXPPXP 510
+APP + PP G++ PP G+ PP + GGPPP P P
Sbjct: 119 MAPPGAPLPPPPQNGILRPPGMAPIPGQGGG--PPGMAPIPGQGGGPPPNYNGLPPP 173
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 599 GGGGGGXKKXIXGXPPXXPXPGGGGRXXXXSXXXXKXPXXXXPPPP 736
GG GGG G P GGGG S + P PPP
Sbjct: 58 GGKGGGKPPPHGGKGGGPPHHGGGGGGGGKSPPVVRPPPVVVRPPP 103
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 745 PXXGGGGXXXGGXLPPXXXXXXXAPXAPGXGGXXGGP 635
P GGGG GG PP P GG GGP
Sbjct: 41 PQHGGGGG--GGSKPPPHHGGKGGGKPPPHGGKGGGP 75
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +3
Query: 711 PPXXXPPPPFXGXXXXXXTXXXXXRPXPXFFFXPXXGGXPXPXLPPGGXXXPPXXP 878
PP PPP P P F++ P P L P G PP P
Sbjct: 71 PPHKHSPPPLSQSLSPPPLITVIHPPPPRFYYFEST--PPPPPLSPDGKGSPPSVP 124
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Frame = +1
Query: 319 PPXPX*RXYCLAPPXSLXXPPGVVFPPXKXXXXGKXXX*---KPPPLXXEKXXXGGPPPX 489
PP P + PP PP V PP PPP+ PPP
Sbjct: 533 PPPPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPP 592
Query: 490 XXXPPXP 510
PP P
Sbjct: 593 VHSPPPP 599
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 828 PXPXLPPG--GXXXPPXXPXXXXFXXXPP--PRGP 920
P P PPG G PP P PP P+GP
Sbjct: 408 PPPPPPPGKKGAGPPPPPPMSKKGPPKPPGNPKGP 442
Score = 23.0 bits (47), Expect(2) = 3.8
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 639 PPXXPPXPGAXGAXXXXXXXGGXXPPXXXPPPP 737
PP PP A G PP PPPP
Sbjct: 384 PPPPPPPSAAAPPPPPPPKKGPAAPP--PPPPP 414
>At2g30560.1 68415.m03722 glycine-rich protein
Length = 171
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +2
Query: 536 GAXXPXGKKKPPXXGAXXXKXGGGGGGXKKXIXGXPPXXPXPGGGG 673
G+ G K G+ + GGGGGG K G GGGG
Sbjct: 6 GSGSGGGGKGGGGGGSGGGRGGGGGGGAKGGCGGGGKSGGGGGGGG 51
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 822 GXPXPXLPPGGXXXPPXXPXXXXFXXXPPPRGPXXF 929
G P P PP PP P F PPP F
Sbjct: 228 GLPPPPPPPPHQAQPPPPPPSGLFPPPPPPMANNGF 263
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,537,449
Number of Sequences: 28952
Number of extensions: 391674
Number of successful extensions: 1258
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2236853040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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