Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H03
(919 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14) 36 0.046
SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0) 33 0.43
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.75
SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.75
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 32 0.75
SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08) 32 0.75
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.75
SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07) 31 0.99
SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40) 31 1.3
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09) 31 1.3
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 31 1.3
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07) 31 1.7
SB_46610| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 30 2.3
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 30 3.0
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 30 3.0
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05) 29 4.0
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 4.0
SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05) 29 4.0
SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84) 29 4.0
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 5.3
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 29 5.3
SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0) 29 7.0
SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_242| Best HMM Match : AFP (HMM E-Value=0.45) 28 9.2
>SB_36847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 344
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 578
V C AG+ C + G A C C+ +CP D + VC + T+ + CE++R C+
Sbjct: 62 VFCHAGQEC-VAAKGKASCECLSECP---DHIKPVCGSDGVTYPNHCELHRIACV 112
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 37.9 bits (84), Expect = 0.011
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +3
Query: 420 CSAG-RVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL------ 578
CSA CE+ ++ +A+C C KDCP E D+ VC +T+ ++C + +Q C+
Sbjct: 1772 CSAPYSSCEVKDN-EAVCECPKDCPKE-DAE--VCGTNWKTYTNECMMRKQACMNNSMVT 1827
Query: 579 --CLDNSDQCRGPQYPXFQIEYYGTCREMPDC-LKAXCLTSP 695
+ D C +Y Y TC+ D + C T P
Sbjct: 1828 VRSIGRCDPC--VRYDCGSTNPYSTCKPKGDSGFECICPTCP 1867
Score = 33.5 bits (73), Expect = 0.24
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +3
Query: 429 GRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
G VC + C C CP S+R VC + T+ S CE++R C
Sbjct: 2987 GEVCVTDSRNVPRCVCPPGCPPAEVSQR-VCASDGLTYPSVCEMHRTAC 3034
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = +3
Query: 438 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC-----LCLDNSDQC 602
C+ + G A C C +DCP + + VC + N + ++C + + C + + C
Sbjct: 1362 CQAKD-GKATCECSEDCP---KTLKPVCGSDNNDYDNECLMQARACATNKTITAHRNGYC 1417
Query: 603 RGPQYPXFQIEYYGTCREMPDCLKAXCLTSPPPP 704
+ Y TC+ + D KA C+ S P
Sbjct: 1418 DPCKNHSCSTPPYSTCKAVDD--KAECVCSKVCP 1449
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 438 CEINEH-GDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 578
CE ++ G C C DC ++D VC + N T+ S+C++ R CL
Sbjct: 206 CEADKSSGVITCKC-PDCKDKSDP---VCGSDNVTYASECQLRRAACL 249
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 465 MCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
+C+C DC ET + +C + +T+ ++C + ++ C
Sbjct: 2151 VCSCPDDCTNET---KPICASDGQTYDNECLMQKRAC 2184
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 37.1 bits (82), Expect = 0.020
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 420 CS-AGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 578
CS G C IN G A C C C S R+ C + T+ S CE+ + CL
Sbjct: 30 CSNQGEECVINSFGMAECRCTSTCSPAQPSDRL-CASDGITYNSKCELNKTACL 82
>SB_51009| Best HMM Match : 7tm_1 (HMM E-Value=2.8e-14)
Length = 579
Score = 35.9 bits (79), Expect = 0.046
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Frame = +3
Query: 420 CSAGRVCEINEHGD---AMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC----- 575
C G VC GD C C CP D VC+ FN+ +++ CE+++ C
Sbjct: 122 CPRGGVCTPYVEGDRSYTTCECPTSCPDLDDP---VCSIFNQEFKNACEMHKYACKLQMS 178
Query: 576 LCLDNSDQCRGPQYP 620
+ + N+ C P P
Sbjct: 179 MAIKNAGACVKPTDP 193
>SB_45722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 35.9 bits (79), Expect = 0.046
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAM-CNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
C GR C I E G++ C C C E VC+ F S+CE+++Q C
Sbjct: 605 CPRGRECIIGEDGNSTSCECSAVCSSE---HAPVCSVFYTDHASECEMHKQAC 654
>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 2411
Score = 32.7 bits (71), Expect = 0.43
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +3
Query: 420 CSAGRVCEI-NEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSD 596
C A + C I N + +C + CP S VC + +T+ S+C V + C
Sbjct: 1053 CFAEQTCVISNGKAECVCPTVDQCP----SGSTVCASDGKTYASECHVKVRNC------- 1101
Query: 597 QCRGPQYPXFQIEYYGTCREMPD-CLKAXC 683
+YP ++ + G C ++ D C C
Sbjct: 1102 ----GRYPKLRVIFEGECGQIADPCSTVQC 1127
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN 590
V C C G +C C+ CP + + VC + T++S+CE+ + C + N
Sbjct: 1411 VTCLYHSKCFPQADGTGVCICLDQCPPDNQNAS-VCGSDLVTYRSECELKAKSCNAMRN 1468
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
C G CEI E G +C C C D VC + +T+ + C + + C
Sbjct: 1804 CQFGGRCEIQEDGTEVCICPTYCRLNYDP---VCGSNRKTYLNFCSLTAEAC 1852
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 32.7 bits (71), Expect = 0.43
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 578
V C C++ + G C C C YE VC +T+ + CE+ CL
Sbjct: 1275 VSCDYYAQCQVEDDGSTSCKCPIFCTYE---YMPVCGTDGKTYGNKCEMRASACL 1326
Score = 31.5 bits (68), Expect = 0.99
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 578
C G+ C + +G A C C CP D VC + +T+ + C++ C+
Sbjct: 1579 CDKGKRCLL-VNGTATCECFSACP---DIYDPVCASNGKTYSNRCDMDADACI 1627
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 31.9 bits (69), Expect = 0.75
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 306 VTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVC 356
>SB_40330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 31.9 bits (69), Expect = 0.75
Identities = 17/75 (22%), Positives = 35/75 (46%)
Frame = +1
Query: 418 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLI 597
T+ ++ ++ T TP T++ + + + + + TST YT + +Y STT
Sbjct: 51 TSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTSTTSY 110
Query: 598 SAVVXNTPXSKSSIT 642
++ TP + + T
Sbjct: 111 TSTTSYTPTTSYTPT 125
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 31.9 bits (69), Expect = 0.75
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 767 PPPPLPXXXGGXXXXXPPPLSXAPXPXFXXXGXXGPPQ 880
PPPP P GG PPP P P GPP+
Sbjct: 199 PPPPPPGFPGGAPPPPPPPFGAPPPPAL----NGGPPR 232
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 767 PPPPLPXXXGGXXXXXPPPLSXAPXP 844
PPPP P G PPP AP P
Sbjct: 198 PPPPPPPGFPGGAPPPPPPPFGAPPP 223
>SB_7030| Best HMM Match : Kazal_2 (HMM E-Value=4.6e-08)
Length = 286
Score = 31.9 bits (69), Expect = 0.75
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 40 VTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCRLKKHVC 90
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.9 bits (69), Expect = 0.75
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 770 PPPLPXXXGGXXXXXPPPLSXAPXPXFXXXGXXGPP 877
PP LP GG PPP+ P P GPP
Sbjct: 455 PPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFGPP 490
>SB_17430| Best HMM Match : Kazal_1 (HMM E-Value=1e-07)
Length = 396
Score = 31.5 bits (68), Expect = 0.99
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
+ C+ C+ DA C C + CP D R C + T+++DC + C
Sbjct: 1 MQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 51
>SB_13131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 31.5 bits (68), Expect = 0.99
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
+ C+ C+ DA C C + CP D R C + T+++DC + C
Sbjct: 155 MQCTHYATCKAYGPKDARCECAESCPTYDDER---CGSDGVTYKNDCLYKKYIC 205
>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
Length = 1042
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 5/78 (6%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN- 590
V C CE DA C C CP D VC +T+ + C + C N
Sbjct: 195 VTCEYFAECEAFAADDAQCVCPSKCPAYID---QVCGTNGQTFDNLCLFKKHVCRIKGNF 251
Query: 591 ----SDQCRGPQYPXFQI 632
CRG Y F I
Sbjct: 252 SYLHHGSCRGTHYAFFLI 269
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 412 KSTAAQDVSAKSTNTETPC---VTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYA 582
++TAA + +AK TETP VTA + T + T+ P + + T +
Sbjct: 980 ETTAAPETTAKPETTETPAASVVTAEVITESLSTAEPQVKFTTAAPISSESPETTAAVTT 1039
Query: 583 STTLISAVVXNTPXSKSSITE 645
++ A + N P +K +I +
Sbjct: 1040 ASPTTDAPITNKPTTKDAIPD 1060
>SB_56344| Best HMM Match : Kazal_2 (HMM E-Value=1.5e-09)
Length = 217
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 578
C G +C + G C C CP ++ VC+ + + + CE++ C+
Sbjct: 19 CMWGEMCRADSSGFTYCECPVSCP---NTYEPVCSVYGIQFPNKCELHMFACI 68
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCV--TASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYAST 588
+TAA +A T T T V TA+ TV T A T+T A TA+ T
Sbjct: 148 ATAAATATATGTTTATATVTATATATVTAAATATATATATATATTTSTATVTATATVTVT 207
Query: 589 TLISAVVXNTPXSKSSIT 642
+ V T + +++T
Sbjct: 208 ATAATTVTATVTAATTVT 225
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +1
Query: 436 SAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVXN 615
+ +TNT P + RT T T A T++ R A T++ STT SA +
Sbjct: 28 AGSTTNTSAPSTSTPRTGSTTTT-SAPSTSTTSNSTTR-APSTSTPRAGSTTTTSAPSTS 85
Query: 616 TPXSKSSITERAEKCLT 666
TP + S+ T A T
Sbjct: 86 TPRTGSTTTTSAPSTST 102
>SB_9563| Best HMM Match : Kazal_1 (HMM E-Value=1.7e-07)
Length = 170
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
V C CE DA C C + CP D VC ET+ + C + + C
Sbjct: 83 VTCDYFAECEAFAADDAQCVCPRKCPSYVD---QVCATNGETFDNLCLLKKHVC 133
>SB_46610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +1
Query: 427 QDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAV 606
++ +A++ ++E+ T SRT P R+TP A+ T + + ++ S T +
Sbjct: 25 REKAAEAFSSESEVKTPSRT-PGRRTPPELQARKETPASRMVDSWISNQRLQSGTRSPSN 83
Query: 607 VXNTPXSKSSITERAE 654
N+P + S+T + +
Sbjct: 84 ASNSPRNSPSLTNKLQ 99
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/54 (29%), Positives = 21/54 (38%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
V C C G A+C C +CP E VC T+ S C + + C
Sbjct: 783 VECKFKARCVGLPDGSAVCECNTECPSEASP---VCGQDGRTYSSTCAMDARAC 833
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 693 PPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPP 845
PPPP L P G PPPP G P P P P
Sbjct: 716 PPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGLPPPPPPIDVPMKP 766
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 767 PPPPLPXXXGGXXXXXPPPL-SXAPXP 844
PPPP P GG PPP+ AP P
Sbjct: 676 PPPPPPPLPGGAAPPPPPPIGGGAPPP 702
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +3
Query: 687 TSPPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPP 845
+SPPPP P PPPP A P P P PP
Sbjct: 48 SSPPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAA---PPPPPPLPAPPPP 97
>SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 809
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 531 NETWQSDCEVYRQRCLCLDNSDQCRGPQYPXFQIEYYGTCR 653
+E ++DC +RC C RGP+ P + Y GTCR
Sbjct: 405 HELRKNDC----RRCRCCRFEGLPRGPEDPAHVVVYCGTCR 441
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 688 LPPPPRXXGXTXXFXXXXPXXAXXXXPPPPPSXXXGRXXXXXTPXP 825
+PPPP G P PPPPP G P P
Sbjct: 291 VPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 654 EMPDCLKAXCLTSPPPPXXGXDLXFXXXXPXXGXTXKXPPPP 779
E+PD + PPPP P G PPPP
Sbjct: 279 EVPDIVTGGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPP 320
>SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 983
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 531 NETWQSDCEVYRQRCLCLDNSDQCRGPQYPXFQIEYYGTCR 653
+E ++DC +RC C RGP+ P + Y GTCR
Sbjct: 579 HELRKNDC----RRCRCCRFEGLPRGPEDPAHVVVYCGTCR 615
>SB_1345| Best HMM Match : IBN_N (HMM E-Value=0.84)
Length = 746
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +3
Query: 441 EINEHGDAMCNCIKDCPY----ETDSRRMVCTNFNETWQSDCEVYRQRCLCL 584
++ EH +C+ C + E+D + N+ Q+DC V++QR + L
Sbjct: 67 QLMEHSVKYASCVPFCTWMAELESDLMNVFRFNWGSMQQNDCAVFKQRVMSL 118
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 441 EINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQ 569
+I EHGD +KDC E ++ ++ C N Q+ C + Q
Sbjct: 2540 DIKEHGDHHTLIVKDCRPE-ETGKLTCKARNSAGQAICSCFVQ 2581
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTL 594
ST + + T+T + T S T T T + TST YT++ +Y STT
Sbjct: 148 STTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTT--SYTSTTSYTSTTSYTSTTSYTSTTS 205
Query: 595 ISAVVXNTPXSKSSIT 642
++ TP + T
Sbjct: 206 YTSTTSYTPTPSYTAT 221
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +1
Query: 418 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLI 597
T+ + ++ T TP T++ + + + + + TST YT++ +Y STT
Sbjct: 129 TSTTSYTPTTSYTPTPSYTSTTSYTSTTSYTSTTSYTSTPSYTSTTSYTSTTSYTSTTSY 188
Query: 598 SAVVXNTPXSKSSIT 642
++ T + + T
Sbjct: 189 TSTTSYTSTTSYTST 203
>SB_42767| Best HMM Match : Thyroglobulin_1 (HMM E-Value=0)
Length = 6725
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 438 CEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCL 578
C +N A C+C C +E +C + +T+ + CE+ R CL
Sbjct: 5144 CSVNNK--ATCSCPDICTFEYSP---LCGSDGKTYDNQCEMERASCL 5185
>SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 511 AWCAQTSTKPGNRIAKYTASDAYASTTLISAVVXNTP 621
+W + + + NRIA Y S YA +I+ ++ N P
Sbjct: 109 SWTFKEADEFANRIANYFKSQGYAKGDVIALILENRP 145
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +1
Query: 436 SAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVXN 615
S ST + TP T S T T TP + T T YT + +Y STT +
Sbjct: 67 SYTSTTSYTP--TTSYTPTTSYTPTT--SYTPTPSYTPTPSYTCTTSYTSTTSYTPTTSY 122
Query: 616 TPXSKSSIT 642
TP + + T
Sbjct: 123 TPTTSYTCT 131
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +1
Query: 418 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLI 597
T+ ++ ++ T TP T + + + + + + T T YT + +Y STT
Sbjct: 21 TSTTSYTSTTSYTPTPSYTPTTSYTSTTSYTSTTSYTPTPSYTPTTSYTTTTSYTSTTSY 80
Query: 598 SAVVXNTPXSKSSIT 642
+ TP + + T
Sbjct: 81 TTTTSYTPTTSYTST 95
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/75 (21%), Positives = 34/75 (45%)
Frame = +1
Query: 418 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLI 597
T+ ++ ++ T TP T + + T + + + T+T YT++ +Y STT
Sbjct: 45 TSTTSYTSTTSYTPTPSYTPTTSYTTTTSYTSTTSYTTTTSYTPTTSYTSTTSYTSTTSY 104
Query: 598 SAVVXNTPXSKSSIT 642
++ T + + T
Sbjct: 105 TSTTSYTSTTSYTST 119
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 448 TNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVXNTPXS 627
T T + T S T T TP + TST YT++ +Y STT ++ T +
Sbjct: 69 TTTTSYTSTTSYTTTTSYTPTT--SYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTT 126
Query: 628 KSSIT 642
+ T
Sbjct: 127 SYTST 131
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.3 bits (60), Expect = 9.2
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 394 GRPLX*KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASD 573
G L KST + +T P T SR TPD+ A+ +T PG + +
Sbjct: 453 GTTLRSKSTITPGSTVSPKSTAAPGTTVSRE--GTNTPDSLLAEGTTAPGTTLGNESTVV 510
Query: 574 AYASTTLISAVVXNTP-XSKSSITERA 651
+ + S V T S+S++T A
Sbjct: 511 PGTTISPESTVAPGTTVTSESTVTRGA 537
>SB_242| Best HMM Match : AFP (HMM E-Value=0.45)
Length = 147
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTL 594
ST + + T+T + T S T T T + TST YT++ +Y STT
Sbjct: 28 STTSYTSTTSYTSTTSYTPTTSYTCTTSYTSTT--SYTSTTSYTSTTSYTSTTSYTSTTS 85
Query: 595 ISAVVXNTPXSKSSIT 642
+ TP + T
Sbjct: 86 YRSTPSYTPTPSYTCT 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,467,146
Number of Sequences: 59808
Number of extensions: 512509
Number of successful extensions: 1813
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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