Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_H03
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 75 7e-14
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 75 7e-14
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 41 0.001
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 41 0.001
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 35 0.094
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 35 0.094
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr... 31 0.87
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 31 0.87
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.2
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 3.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 3.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.2
Z81487-6|CAB03996.2| 872|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 8.1
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p... 28 8.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.1
AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical ... 28 8.1
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 74.9 bits (176), Expect = 7e-14
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSD 596
C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RCLC S
Sbjct: 58 CGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCLCKRKSK 117
Query: 597 QCRGPQYPXFQIEYYGTCREMPDC 668
+C +EY G C+++ +C
Sbjct: 118 ECSKAFNAKVHLEYLGECKKLDEC 141
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 74.9 bits (176), Expect = 7e-14
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSD 596
C G+ C + + G+ C CI CP + D VC N N+T+ S C++YR+RCLC S
Sbjct: 58 CGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERCLCKRKSK 117
Query: 597 QCRGPQYPXFQIEYYGTCREMPDC 668
+C +EY G C+++ +C
Sbjct: 118 ECSKAFNAKVHLEYLGECKKLDEC 141
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 575
C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 518 CDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 373 MECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN--- 590
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 448 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 502
Query: 591 --SDQCRGPQYPXFQIEYYGTC 650
+ C + + ++Y C
Sbjct: 503 KYNSACEACKLKKEKCDFYSAC 524
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCP-YETDSRRMVCTNFNETWQSDCEVYRQRC 575
C C + E+ A C C DCP YE + + VC T+ S+C + + C
Sbjct: 526 CDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578
Score = 31.9 bits (69), Expect = 0.66
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 414 VHCSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRC 575
+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 381 MECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDN--- 590
C +VC + D C+ CP TD + VC + +T+ ++C + C+ N
Sbjct: 456 CKKPQVCVVV---DGKPKCV--CPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFV 510
Query: 591 --SDQCRGPQYPXFQIEYYGTC 650
+ C + + ++Y C
Sbjct: 511 KYNSACEACKLKKEKCDFYSAC 532
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 34.7 bits (76), Expect = 0.094
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKY---TASDAYAS 585
ST+ S+ + + T S ++PT TP+ + S+ P N I Y T + +
Sbjct: 337 STSTTQQSSSTITSSPSSTTLSTSIPTTTTPEI-TSTLSSLPDNAICSYLDETTTSTTFT 395
Query: 586 TTLISAVVXNTPXSKSSITE 645
TT++++ P + ++ TE
Sbjct: 396 TTMLTSTTTEEPSTSTTTTE 415
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 418 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTK-PGNRIAKYTASDAYASTTL 594
+ + + +T T T VT++ TVPT + TST P + S + ST
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 595 IS-AVVXNTPXSKSSIT 642
S + T S S+IT
Sbjct: 333 TSTSSTSTTQQSSSTIT 349
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 34.7 bits (76), Expect = 0.094
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKY---TASDAYAS 585
ST+ S+ + + T S ++PT TP+ + S+ P N I Y T + +
Sbjct: 337 STSTTQQSSSTITSSPSSTTLSTSIPTTTTPEI-TSTLSSLPDNAICSYLDETTTSTTFT 395
Query: 586 TTLISAVVXNTPXSKSSITE 645
TT++++ P + ++ TE
Sbjct: 396 TTMLTSTTTEEPSTSTTTTE 415
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 418 TAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTK-PGNRIAKYTASDAYASTTL 594
+ + + +T T T VT++ TVPT + TST P + S + ST
Sbjct: 273 STSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTAS 332
Query: 595 IS-AVVXNTPXSKSSIT 642
S + T S S+IT
Sbjct: 333 TSTSSTSTTQQSSSTIT 349
>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical
protein W02C12.1 protein.
Length = 1372
Score = 31.5 bits (68), Expect = 0.87
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +3
Query: 429 GRVCEINEHGDAM-CNCIKD-CPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQC 602
G +CE + + + C + D C + CTN T+ DC + C N D+C
Sbjct: 123 GYMCECADGYEGVHCQHLVDHCAKQPCHNNATCTNMGATYHCDCTLGFDGVHCEMNIDEC 182
Query: 603 RGPQYPXFQIEYYGTCREMPDCLKAXC 683
Q E +CR+ + K C
Sbjct: 183 AENQCDKLGTE---SCRDAVNDFKCVC 206
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCE 557
CS G C G+ MC C D Y S C + C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +2
Query: 767 PPPPLPXXXGGXXXXXPPP---LSXAPXPXFXXXGXXGP 874
PPPPLP G PPP L P P G GP
Sbjct: 564 PPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC---LCL 584
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 585 DNSDQC 602
+ S +C
Sbjct: 445 EESLKC 450
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 420 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNET--WQSDCEVYRQRC---LCL 584
C G E + HG + C K CP T+ +C + ++T QS+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 585 DNSDQC 602
+ S +C
Sbjct: 445 EESLKC 450
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTL 594
+T + +T T TP T + + T T T+T P T + + +TT+
Sbjct: 278 TTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTASTTT--FKTTTI 335
Query: 595 ISAVVXNTPXSKSSITE 645
+ TP + ++ T+
Sbjct: 336 TTTTQTTTPTTTATTTK 352
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/82 (24%), Positives = 31/82 (37%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTL 594
+T + +ST TET T T T T A T+T I T + +T
Sbjct: 291 TTTPTTTTTESTTTETTSTTTPTTTTTAPTTTT-TASTTTFKTTTITTTTQTTTPTTTAT 349
Query: 595 ISAVVXNTPXSKSSITERAEKC 660
+ TP + + + + KC
Sbjct: 350 TTKPTTTTPTTTRTPVDCSAKC 371
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +3
Query: 690 SPPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPPXXXXXGXL 869
SPPPP G PPPP G+ P P G PP
Sbjct: 271 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 330
Query: 870 XPPK 881
PP+
Sbjct: 331 PPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +3
Query: 690 SPPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPPXXXXXGXL 869
SPPPP G PPPP G+ P P G PP
Sbjct: 292 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 351
Query: 870 XPPK 881
PP+
Sbjct: 352 PPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +3
Query: 690 SPPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPPXXXXXGXL 869
SPPPP G PPPP G+ P P G PP
Sbjct: 277 SPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPP 336
Query: 870 XPPK 881
PP+
Sbjct: 337 PPPR 340
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 691 PPPPRXXGXTXXFXXXXPXXAXXXXPPPPPSXXXGRXXXXXTPXP 825
PPPP G P PPPPS GR P P
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +3
Query: 693 PPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPPXXXXXGXLX 872
PPPP + P G T + PPPP G P P P PP
Sbjct: 264 PPPPPSVTPMP-PPMPPTPGMTPRPPPPP--SSGMWPPPPPPPPGRTPGPPGMPGMPPPP 320
Query: 873 PP 878
PP
Sbjct: 321 PP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/62 (30%), Positives = 21/62 (33%)
Frame = +3
Query: 693 PPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPPXXXXXGXLX 872
PPPP + P G T + PPPP G P P P PP
Sbjct: 274 PPPPPSVTPMP-PPMPPTPGMTPRPPPPP--SSGMWPPPPPPPPGRTPGPPGMPGMPPPP 330
Query: 873 PP 878
PP
Sbjct: 331 PP 332
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +2
Query: 767 PPPP--LPXXXGGXXXXXPPPLSXAPXPXFXXXG--XXGPP 877
PPPP LP GG PPP P P G GPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +2
Query: 767 PPPP--LPXXXGGXXXXXPPPLSXAPXPXFXXXG--XXGPP 877
PPPP LP GG PPP P P G GPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Frame = +2
Query: 767 PPPP--LPXXXGGXXXXXPPPLSXAPXPXFXXXG--XXGPP 877
PPPP LP GG PPP P P G GPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>Z81487-6|CAB03996.2| 872|Caenorhabditis elegans Hypothetical
protein C54E10.1 protein.
Length = 872
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 673 FRQSGISRHVP*YSIWKXGYXGPR--H*SELSRHKHRWRYTSQSDCQVSLKFVHT 515
FR+ + HV S + GY + ++ RHK +++Y S+ + SL +HT
Sbjct: 605 FRKKAFNSHVVYASTFSVGYCERTMINKTQARRHKRKYKYRSKGNHSRSLLGIHT 659
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +1
Query: 415 STAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTL 594
ST +T T TP + T T ++P T T P + T + STT+
Sbjct: 384 STTTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTTI 443
Query: 595 ISAVVXNTPXS--KSSITERAEK 657
+ P + +S+I K
Sbjct: 444 PPSTTTRKPANPRRSTIMSATSK 466
>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
protein F47C12.1 protein.
Length = 1827
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 1/91 (1%)
Frame = +3
Query: 417 HCSAGRVCEINEHGDAMCNCIKD-CPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNS 593
HC G V GD C ++D C + C T++ C C S
Sbjct: 1694 HCKPGYV------GDR-CEMLEDVCSTQPCYNGGKCEQVGTTYKCTCPKMFNGARCQFES 1746
Query: 594 DQCRGPQYPXFQIEYYGTCREMPDCLKAXCL 686
D+C G + P G C ++P CL
Sbjct: 1747 DECNGVKCPN-----GGVCHDLPGVKSTTCL 1772
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = +3
Query: 693 PPPPXXGXDLXFXXXXPXXGXTXKXPPPPFXXXGAXXXXXXPXPFXGPXPPXXXXXGXLX 872
PPPP F P G PPP GA P + P P G
Sbjct: 367 PPPPVSSAPGNFAPP-PQSGPPGAFAPPP-SAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Query: 873 PPKXXXXFFXP 905
PP+ F P
Sbjct: 425 PPQGGPGGFGP 435
>AC024751-7|AAK21507.2| 1258|Caenorhabditis elegans Hypothetical
protein Y18H1A.3 protein.
Length = 1258
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 412 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDA 576
+ +A VS K + ++PC SRTV R D + KP + + +A
Sbjct: 876 RQSAIISVSRKDFHAKSPCEITSRTVVGRHIWDLDTHEDVRKPATNVTNWLRKEA 930
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,717,789
Number of Sequences: 27780
Number of extensions: 390746
Number of successful extensions: 1472
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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