Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_H02
         (886 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical p...    31   1.1  
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>Z54342-15|CAK55172.1|  465|Caenorhabditis elegans Hypothetical
           protein C08H9.4b protein.
          Length = 465

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 23/96 (23%), Positives = 44/96 (45%)
 Frame = +3

Query: 240 LSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDA 419
           L   TH++Y +A  +     +V        +    N R  +S       L +++S+GG  
Sbjct: 136 LQMLTHIIYLFAIPRNGVITIVDDRSLRKFEEMKSNAREASST------LKIMISIGGHY 189

Query: 420 DTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFXG 527
           ++     ++ L+ ++ +RT F+NS V   E+Y   G
Sbjct: 190 NSRS---FSGLVFNETSRTVFVNSIVSFVEKYDIDG 222


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 240 LSFCTHLLYGYAGIQPDT-YKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSV 407
           ++ CTHL+YG   I  DT Y   S+++ ++     DN R    L+  +P   +L+ V
Sbjct: 48  ITTCTHLVYGSIPIDRDTGYPQYSVSD-VESGYDIDNIRTFMRLRKYHPNAKLLMGV 103


>Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical
           protein C34F6.7 protein.
          Length = 411

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 520 KPYCSANSTPE-LMKAVRACCDSSRRLYFSGSSVSASPPTDNNTVRP 383
           K  C A  T E ++K  R+C    +R++F       +PP +N   RP
Sbjct: 309 KDPCFACGTEENMVKIERSCDGQEQRVFFHDIGARFTPPCENCICRP 355


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,781,799
Number of Sequences: 27780
Number of extensions: 292906
Number of successful extensions: 796
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)