Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G24
         (1003 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0147 + 12277012-12277207,12277401-12277495,12277608-122779...    66   5e-11
08_02_0295 - 15449323-15449376,15449625-15449804,15450558-154506...    29   4.4  
10_08_0133 + 15100049-15101836,15103344-15103382                       29   5.8  

>06_02_0147 +
           12277012-12277207,12277401-12277495,12277608-12277949,
           12278074-12278223,12278311-12278832,12279082-12279290,
           12279412-12279544,12279814-12279954
          Length = 595

 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +3

Query: 123 NIPIDINIGKLQDWLISRRXVSKDWQKNVIAVREKINNAIXDMPAHQDXAAL-LSGRYIN 299
           ++PIDI  G+LQ+WL+ R+ V +DW+K +  +R ++  A   +P   D + L L    I 
Sbjct: 9   SLPIDIAFGRLQEWLVDRKRVPQDWRKRLAGIRARLAAAFASLPRDLDPSLLALEPDEIG 68

Query: 300 YFHCLXIIEILKETEADTKNLFGR 371
           Y     I  IL E+  +++N+FGR
Sbjct: 69  YLEAKKIYGILLESNPESRNIFGR 92


>08_02_0295 -
           15449323-15449376,15449625-15449804,15450558-15450604,
           15450695-15450875,15451348-15451452,15452414-15452473,
           15452957-15453041,15453337-15453353
          Length = 242

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -3

Query: 251 HVXDGIVDLLSHSYDILLPIFRDXPTTDQPVLKL 150
           HV   ++DLL  +Y+ +LPI+    TTD+   K+
Sbjct: 113 HVVKYLLDLLGLNYEDVLPIYIGDDTTDENAFKV 146


>10_08_0133 + 15100049-15101836,15103344-15103382
          Length = 608

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 247 SWMALLIFSL--TAMTFFCQSLETXLRLINQS 158
           +W+A+L + L  TA  +FC SLE   RL+  S
Sbjct: 124 AWLAVLFYLLGDTAAVYFCSSLEGLSRLLRLS 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,930,937
Number of Sequences: 37544
Number of extensions: 218794
Number of successful extensions: 664
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2940399740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)