Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G24
         (1003 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC072435-1|AAH72435.1|  506|Homo sapiens CDK5 regulatory subunit...   136   9e-32
BC009957-1|AAH09957.1|  506|Homo sapiens CDK5 regulatory subunit...   136   9e-32
AK223387-1|BAD97107.1|  506|Homo sapiens CDK5 regulatory subunit...   136   9e-32
AK023722-1|BAB14657.1|  506|Homo sapiens protein ( Homo sapiens ...   136   9e-32
AF343090-1|AAK69655.1|  434|Homo sapiens HSF-27 protein protein.      136   9e-32
AB062433-1|BAB93496.1|  506|Homo sapiens OK/SW-cl.114 protein.        136   9e-32

>BC072435-1|AAH72435.1|  506|Homo sapiens CDK5 regulatory subunit
           associated protein 3 protein.
          Length = 506

 Score =  136 bits (330), Expect = 9e-32
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +3

Query: 114 DESNIPIDINIGKLQDWLISRRXVSKDWQKNVIAVREKINNAIXDMPAHQDXAALLSGRY 293
           D  ++PIDI   KL DWL+ RR  S  WQ  V+ +REKIN AI DMP  ++ A LLSG Y
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSY 62

Query: 294 INYFHCLXIIEILKETEADTKNLFGRYGSQRMKDWQDV 407
           I+YFHCL I+++LK TEA TKN+FGRY SQRMKDWQ++
Sbjct: 63  IHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEI 100



 Score = 35.1 bits (77), Expect = 0.40
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 437 YLAEAXQMLVRNITYDIPGLNRQIA 511
           YL E   +LVRN+ Y+IP L +QIA
Sbjct: 110 YLVELSSLLVRNVNYEIPSLKKQIA 134


>BC009957-1|AAH09957.1|  506|Homo sapiens CDK5 regulatory subunit
           associated protein 3 protein.
          Length = 506

 Score =  136 bits (330), Expect = 9e-32
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +3

Query: 114 DESNIPIDINIGKLQDWLISRRXVSKDWQKNVIAVREKINNAIXDMPAHQDXAALLSGRY 293
           D  ++PIDI   KL DWL+ RR  S  WQ  V+ +REKIN AI DMP  ++ A LLSG Y
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSY 62

Query: 294 INYFHCLXIIEILKETEADTKNLFGRYGSQRMKDWQDV 407
           I+YFHCL I+++LK TEA TKN+FGRY SQRMKDWQ++
Sbjct: 63  IHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEI 100



 Score = 35.1 bits (77), Expect = 0.40
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 437 YLAEAXQMLVRNITYDIPGLNRQIA 511
           YL E   +LVRN+ Y+IP L +QIA
Sbjct: 110 YLVELSSLLVRNVNYEIPSLKKQIA 134


>AK223387-1|BAD97107.1|  506|Homo sapiens CDK5 regulatory subunit
           associated protein 3 isoform b variant protein.
          Length = 506

 Score =  136 bits (330), Expect = 9e-32
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +3

Query: 114 DESNIPIDINIGKLQDWLISRRXVSKDWQKNVIAVREKINNAIXDMPAHQDXAALLSGRY 293
           D  ++PIDI   KL DWL+ RR  S  WQ  V+ +REKIN AI DMP  ++ A LLSG Y
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSY 62

Query: 294 INYFHCLXIIEILKETEADTKNLFGRYGSQRMKDWQDV 407
           I+YFHCL I+++LK TEA TKN+FGRY SQRMKDWQ++
Sbjct: 63  IHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEI 100



 Score = 32.3 bits (70), Expect = 2.8
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 437 YLAEAXQMLVRNITYDIPGLNRQIA 511
           YL     +LVRN+ Y+IP L +QIA
Sbjct: 110 YLVVLSSLLVRNVNYEIPSLKKQIA 134


>AK023722-1|BAB14657.1|  506|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13660 fis, clone PLACE1011586, highly similar to
           Rattus norvegicus clone C53 CDK5 activator-binding
           protein mRNA. ).
          Length = 506

 Score =  136 bits (330), Expect = 9e-32
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +3

Query: 114 DESNIPIDINIGKLQDWLISRRXVSKDWQKNVIAVREKINNAIXDMPAHQDXAALLSGRY 293
           D  ++PIDI   KL DWL+ RR  S  WQ  V+ +REKIN AI DMP  ++ A LLSG Y
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSY 62

Query: 294 INYFHCLXIIEILKETEADTKNLFGRYGSQRMKDWQDV 407
           I+YFHCL I+++LK TEA TKN+FGRY SQRMKDWQ++
Sbjct: 63  IHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEI 100



 Score = 35.1 bits (77), Expect = 0.40
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 437 YLAEAXQMLVRNITYDIPGLNRQIA 511
           YL E   +LVRN+ Y+IP L +QIA
Sbjct: 110 YLVELSSLLVRNVNYEIPSLKKQIA 134


>AF343090-1|AAK69655.1|  434|Homo sapiens HSF-27 protein protein.
          Length = 434

 Score =  136 bits (330), Expect = 9e-32
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +3

Query: 114 DESNIPIDINIGKLQDWLISRRXVSKDWQKNVIAVREKINNAIXDMPAHQDXAALLSGRY 293
           D  ++PIDI   KL DWL+ RR  S  WQ  V+ +REKIN AI DMP  ++ A LLSG Y
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSY 62

Query: 294 INYFHCLXIIEILKETEADTKNLFGRYGSQRMKDWQDV 407
           I+YFHCL I+++LK TEA TKN+FGRY SQRMKDWQ++
Sbjct: 63  IHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEI 100



 Score = 35.1 bits (77), Expect = 0.40
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 437 YLAEAXQMLVRNITYDIPGLNRQIA 511
           YL E   +LVRN+ Y+IP L +QIA
Sbjct: 110 YLVELSSLLVRNVNYEIPSLKKQIA 134


>AB062433-1|BAB93496.1|  506|Homo sapiens OK/SW-cl.114 protein.
          Length = 506

 Score =  136 bits (330), Expect = 9e-32
 Identities = 59/98 (60%), Positives = 73/98 (74%)
 Frame = +3

Query: 114 DESNIPIDINIGKLQDWLISRRXVSKDWQKNVIAVREKINNAIXDMPAHQDXAALLSGRY 293
           D  ++PIDI   KL DWL+ RR  S  WQ  V+ +REKIN AI DMP  ++ A LLSG Y
Sbjct: 3   DHQHVPIDIQTSKLLDWLVDRRHCSLKWQSLVLTIREKINAAIQDMPESEEIAQLLSGSY 62

Query: 294 INYFHCLXIIEILKETEADTKNLFGRYGSQRMKDWQDV 407
           I+YFHCL I+++LK TEA TKN+FGRY SQRMKDWQ++
Sbjct: 63  IHYFHCLRILDLLKGTEASTKNIFGRYSSQRMKDWQEI 100



 Score = 35.1 bits (77), Expect = 0.40
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 437 YLAEAXQMLVRNITYDIPGLNRQIA 511
           YL E   +LVRN+ Y+IP L +QIA
Sbjct: 110 YLVELSSLLVRNVNYEIPSLKKQIA 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,985,653
Number of Sequences: 237096
Number of extensions: 1193967
Number of successful extensions: 2528
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13378564892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)