Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G22
         (982 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    30   0.032
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    28   0.13 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   3.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   4.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   8.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   8.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   8.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   8.4  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 288 ANSGLVQICKMAQVYPHPAPEGCTSASSESAPSDQPIYPDTG 413
           A  GL  + ++  VYP+     C   + E++ SD P +P  G
Sbjct: 178 ARHGLETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +1

Query: 715 PPPCPCTXQEMPMLTSPKCGVW*PXXPXPRS-RXPSXXXSXTPPPPS 852
           PP  P      P+ T+PK G W P      + R  +   +  PP P+
Sbjct: 415 PPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAPPAPA 461


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 330 YPHP--APEGCTSASSESAPSDQPIYPDTG 413
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +3

Query: 330 YPHP--APEGCTSASSESAPSDQPIYPDTG 413
           YP+P  +PE    A+S   PS  P+ P  G
Sbjct: 64  YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +1

Query: 652 SLPASVMPXNGRTHTALSGPVPPPCPCTXQEMPMLTSP 765
           SL A         H  ++ PVPP         P +TSP
Sbjct: 389 SLAAMTTHMKEAKHCGVNVPVPPMQSQIINPQPQITSP 426


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 806 DRGXGXXGHQTPHLGEVSMGISWXVQGH 723
           + G G     T   G+  + ISW + GH
Sbjct: 616 NEGDGVSVQCTVSKGDYPLNISWTLNGH 643


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 282 ALTNGKVLWPLLEER 238
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 282 ALTNGKVLWPLLEER 238
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 282 ALTNGKVLWPLLEER 238
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 282 ALTNGKVLWPLLEER 238
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,301
Number of Sequences: 336
Number of extensions: 4135
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27823477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)