Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_G22
(982 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A3.04 |rpl8||60S ribosomal protein L7a |Schizosaccharomyce... 113 3e-26
SPAC607.03c |snu13||U3 snoRNP-associated protein Snu13|Schizosac... 44 4e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.012
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.061
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.081
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.33
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.33
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 0.76
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.0
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.3
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 1.7
SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101 |Sch... 28 1.7
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 2.3
SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog 1|Schizosa... 28 2.3
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 4.0
SPBC56F2.12 |ilv5||acetohydroxyacid reductoisomerase|Schizosacch... 26 7.1
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 26 9.3
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 9.3
>SPBC29A3.04 |rpl8||60S ribosomal protein L7a |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 113 bits (273), Expect = 3e-26
Identities = 50/76 (65%), Positives = 61/76 (80%)
Frame = +1
Query: 235 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLD 414
NPLF RP++F IGQ IQP RDLSRFV+WP+YIR+QR++ +L RLKVPP I QF +TLD
Sbjct: 24 NPLFVSRPRSFGIGQDIQPKRDLSRFVKWPEYIRLQRRRKILNLRLKVPPAIAQFQKTLD 83
Query: 415 KTTAKGLFKILEKYRP 462
K TA +FK+L KYRP
Sbjct: 84 KNTATQVFKLLNKYRP 99
Score = 62.5 bits (145), Expect = 9e-11
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +2
Query: 548 PTPSRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCXXMXVPILXCQGQSXL 721
P + G N V L+E KKA+LV+IA DVDPIELV+FLPALC M VP + ++ L
Sbjct: 129 PYNVKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKNKARL 186
>SPAC607.03c |snu13||U3 snoRNP-associated protein
Snu13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 125
Score = 43.6 bits (98), Expect = 4e-05
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 560 RSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALCXXMXVPILXCQGQSXL 721
R G N TK + + ++ +V+A D +PIE++L LP LC VP + ++ L
Sbjct: 33 RKGANEATKTLNRGISEFIVMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAAL 86
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.9 bits (94), Expect = 1e-04
Identities = 35/102 (34%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Frame = +1
Query: 697 ALSGPVPPPCPCTXQEMPMLTSPKCG----VW*PXXPXPRSRXPSXXXSXTPP-PPSXXX 861
A+S P PP + P L P G P P P S PS S P PPS
Sbjct: 384 AVSNPPAPPPAIPGRSAPAL--PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM 441
Query: 862 XPXVLRP--PXXPXXPPXHPGXPFXPPPXXXPPKXXGPPPLP 981
P P P PP G P PP PP PPP P
Sbjct: 442 GAPAAPPLPPSAPIAPPLPAGMPAAPP---LPPAAPAPPPAP 480
Score = 29.1 bits (62), Expect = 1.0
Identities = 30/113 (26%), Positives = 38/113 (33%), Gaps = 6/113 (5%)
Frame = +1
Query: 658 PASVMPXNGRTHTALSGPVPPPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXP------S 819
P + + N ++ P+PPP + L + K P P R+R S
Sbjct: 274 PIAPVSMNPAINSTSKPPLPPPS--SRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGS 331
Query: 820 XXXSXTPPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPPKXXGPPPL 978
S PPPP P PP P PPP P PPPL
Sbjct: 332 SNSSLPPPPP-----PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/67 (31%), Positives = 23/67 (34%)
Frame = +3
Query: 780 VTXPPXSPVAXXIXXXFTHPXPXLPXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQX 959
V PP P + + P P LP A P P AP P PP P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAP-PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPL--PPAA 473
Query: 960 XRPPPPP 980
PPP P
Sbjct: 474 PAPPPAP 480
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 849 LPXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
LP P S P R P PP S P R PPP
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 27.9 bits (59), Expect = 2.3
Identities = 28/99 (28%), Positives = 33/99 (33%), Gaps = 4/99 (4%)
Frame = +1
Query: 697 ALSGPVPPPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXXSXTP--PPPSXXXXPX 870
+LS P PPP P ++SP P P S P+ + P PPPS
Sbjct: 247 SLSAPAPPPIP--PPSNGTVSSPPNSP--PRPIAPVSMNPAINSTSKPPLPPPSSRVSAA 302
Query: 871 VL--RPPXXPXXPPXHPGXPFXPPPXXXPPKXXGPPPLP 981
L P PP PP PPP P
Sbjct: 303 ALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Score = 27.5 bits (58), Expect = 3.1
Identities = 25/98 (25%), Positives = 28/98 (28%)
Frame = +1
Query: 661 ASVMPXNGRTHTALSGPVPPPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXXSXTP 840
A +P G + PVP P P P P P P P
Sbjct: 400 APALPPLGNASRTSTPPVPTP-PSLPPSAPPSLPPSAP---PSLPMGAPAAPPL------ 449
Query: 841 PPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPP 954
PP + P P P PP P P P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Frame = +1
Query: 883 PXXPXXPPXHPGXPFXPPPXXXPP-KXXGPPPLP 981
P PP P P PP P PPP+P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIP 257
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 31/114 (27%), Positives = 37/114 (32%), Gaps = 6/114 (5%)
Frame = +1
Query: 658 PASVMPXNGRTHTALSGPVP---PPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXX 828
P+ P + A PVP PP P P + +P P P+
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 829 SXTPPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPP---KXXGPPPLP 981
P P P V P P P G P PPP PP G PP+P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 36.3 bits (80), Expect = 0.007
Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 13/122 (10%)
Frame = +1
Query: 655 LPASVMPXNGRTHTALSGPVPPPCPCTXQEMPMLTSPK--------CGVW*PXXPXPRSR 810
+P S P + A S P PP P E+P + +P G+ P P P
Sbjct: 1045 IPTSTPPVPKSSSGAPSAP--PPVPAPSSEIPSIPAPSGAPPVPAPSGI--PPVPKPSVA 1100
Query: 811 XPSXXXSXT--PPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPPKXXGP---PP 975
P PP P+ P V +P P G P P P P P PP
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 976 LP 981
+P
Sbjct: 1161 VP 1162
Score = 35.9 bits (79), Expect = 0.009
Identities = 31/114 (27%), Positives = 39/114 (34%), Gaps = 10/114 (8%)
Frame = +1
Query: 670 MPXNGRTHTALSGPVPPPCPCTXQEMPMLTSPKCGVW*-PXXPXPRSRXPSXXX--SXTP 840
+P + + S P P P+ TSP + P P S+ P + P
Sbjct: 973 LPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAP 1032
Query: 841 PPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXP-------PKXXGPPPLP 981
P P P V P P P G P PPP P P G PP+P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Score = 35.1 bits (77), Expect = 0.015
Identities = 34/116 (29%), Positives = 39/116 (33%), Gaps = 8/116 (6%)
Frame = +1
Query: 658 PASVMPXNGRTHTALSGPVP---PPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXX 828
P+S +P A P P PP P P + P V P P P P
Sbjct: 1069 PSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAV--PPVPAPSGAPPVPKP 1126
Query: 829 SXTPPP-PSXXXXPXVLRPPXXPXXPPXHPGXPFXPPP-XXXPP---KXXGPPPLP 981
S PP P P V +P P G P P P PP G PP+P
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 32.7 bits (71), Expect = 0.081
Identities = 25/86 (29%), Positives = 27/86 (31%), Gaps = 2/86 (2%)
Frame = +1
Query: 718 PPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXXS-XTPPPPSXXXXPXVLRP-PXX 891
PP P +P + P GV P P P P S PP P P V P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGV--PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGL 1226
Query: 892 PXXPPXHPGXPFXPPPXXXPPKXXGP 969
P P P P P P P
Sbjct: 1227 PPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +1
Query: 718 PPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXXSXTPPPPS 852
PP P + P + +P P PRS PS + +P P S
Sbjct: 1227 PPVPVPTAKAPPVPAPSSEA--PSVSTPRSSVPSPHSNASPSPTS 1269
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.1 bits (82), Expect = 0.004
Identities = 35/114 (30%), Positives = 37/114 (32%), Gaps = 4/114 (3%)
Frame = +1
Query: 649 GSLPASVMPXNGRTHTALSGPVPPPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXX 828
G L A MP + + PP P L P P P P
Sbjct: 102 GGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP 161
Query: 829 SXTPPPPSXXXXPXVLRPPXXP----XXPPXHPGXPFXPPPXXXPPKXXGPPPL 978
S PP PS L PP P PP P P PP PPK PPPL
Sbjct: 162 SKAPPIPSS------LPPPAQPAAPVKSPPSAPSLPSAVPP--MPPKVP-PPPL 206
Score = 30.3 bits (65), Expect = 0.43
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = +3
Query: 789 PPXSPVAXXIXXXFTHPXPX-LPXPXAARPSXPXX-PXXAPXXPRXXLPXPPXXSXPQXX 962
PP SP + P P LP P A+P+ P P AP P P PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPP--AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Query: 963 RPP 971
+ P
Sbjct: 208 QAP 210
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.012
Identities = 19/57 (33%), Positives = 21/57 (36%)
Frame = +1
Query: 799 PRSRXPSXXXSXTPPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPPKXXGP 969
P+S P + TPPPP P PP P P P P P P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPP----PPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 34.3 bits (75), Expect = 0.027
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +1
Query: 835 TPPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPPKXXGPPPLP 981
TPP P + P P P P P PP PP PPPLP
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP-PPPLP 1736
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 841 PPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPPKXXGPPPLP 981
P + P PP P P PPP PP GPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPP-SAPPMPAGPPSAP 1731
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/66 (25%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +1
Query: 655 LPASVMPXNGRTHTALS-GPVPPPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXXS 831
+P + + T T+ + P+P P Q M P P P P + P
Sbjct: 1318 IPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKMSLEPPVRPAVPTSPKP--QIPDSSNV 1375
Query: 832 XTPPPP 849
PPPP
Sbjct: 1376 HAPPPP 1381
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.1 bits (72), Expect = 0.061
Identities = 27/86 (31%), Positives = 27/86 (31%)
Frame = -3
Query: 974 GGGPXXLGGXXXGGGXKGXPGXXGGXXGXXGGRRTXGXXXXEGGGGVXEXXXDGXRDRGX 795
GGG GG GG PG GG G G G GGG G G
Sbjct: 187 GGGFGGFGGG--SGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Query: 794 GXXGHQTPHLGEVSMGISWXVQGHGG 717
G G G G GHGG
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 29.5 bits (63), Expect = 0.76
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -3
Query: 980 GRGGGPXXLGGXXXG--GGXKGXPGXXGGXXGXXGGRRTXG 864
G GGP GG G GG G G GG G GG G
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.081
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +1
Query: 829 SXTPPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPPKXXGPPPLP 981
S PPPP+ P P P G P PPP PPP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = +1
Query: 784 PXXPXPRSRXPSXXXSXTPPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPP 954
P P P P+ + P PP P + PP P P P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPA---PIMGGPPPPPPPPGVAGAGP--PPPPPPPP 783
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +3
Query: 837 PXPXLPXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPPP 980
P P + P A P P P PP + PPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.33
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 901 PPXHPGXPFXPPPXXXPPKXXGPPPLP 981
PP +P P PPP PP PPP P
Sbjct: 5 PPGNPPPP-PPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 880 PPXXPXXPPXHPGXPFXPPPXXXPPKXXGPPP 975
PP P PP PG F PP PP PPP
Sbjct: 5 PPGNPPPPPPPPG--FEPPSQPPPP----PPP 30
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.33
Identities = 28/102 (27%), Positives = 31/102 (30%), Gaps = 7/102 (6%)
Frame = +1
Query: 697 ALSGPVPPPCPCTXQEMPMLTSPKCGVW*PXXPXPRSRXPSXXXSXTPPPPSXXXXPXVL 876
ALS P PP P E+P + P P P + P P P V
Sbjct: 571 ALSVPQPPVAP-VAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVP 629
Query: 877 RPPXXPXXP-----PXHPGXPFXP--PPXXXPPKXXGPPPLP 981
P P P P P P P P P PP P
Sbjct: 630 EAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAP 671
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.5 bits (63), Expect = 0.76
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P +P P P +P PP P PPPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P P +P PP P PPPP
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P P +P PP P PPPP
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P P +P PP P PPPP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P P +P PP P PPPP
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P P +P PP P PPPP
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P P +P PP P PPPP
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +3
Query: 852 PXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P P +P PP P PPPP
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +3
Query: 858 PXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPPPP 977
P P P P +P PP P PPPP
Sbjct: 198 PAHHEPGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -3
Query: 980 GRGGGPXXLGGXXXGGGXKGXPGXXGGXXGXXGGRRTXGXXXXEGG 843
GRGG GG GG G G GG G GG R GG
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGG--GSRGGSRGGFRGGSRGG 189
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = -3
Query: 980 GRGGGPXXLGGXXXG-GGXKGXPGXXGGXXGXXGGR--RTXGXXXXEGGGG 837
GRGG GG G GG +G G GG G GGR G GG G
Sbjct: 17 GRGGFNGGRGGFGGGRGGARG--GGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Frame = -3
Query: 980 GRGGGPXXLGGXXXG-GGXKGXPGXX--GGXXGXXGGRRTXGXXXXEGGG 840
GRGG GG G GG G G GG G GGR G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 980 GRGGGPXXLGGXXXGGGXKGXPGXXGGXXGXXGGRRTXGXXXXEGGG 840
G GG GG G G G GG G G R G GG
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -3
Query: 938 GGGXKGXPGXXGGXXGXXGGRRTXGXXXXEGGGG 837
GGG +G G GG G GGR G G GG
Sbjct: 446 GGGSRGGRGGFGG-RGGFGGRGGFGGGRGRGRGG 478
>SPAC19A8.13 |usp101|snp1|U1 snRNP-associated protein Usp101
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 261
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = -1
Query: 982 GGGGGGRXXWGXXXXGGXGRXXRGXXGAXXGWXGXEGRAAXGXGRXGXG 836
GGG GGR G RG G G+ G +++ G R G G
Sbjct: 190 GGGLGGRHYTKERPRRERGSRFRGDSGFRGGYRGGFRKSSGGGSRFGRG 238
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 2.3
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +1
Query: 784 PXXPXPRSRXPSXXXSXTPPPPSXXXXPXVLRPPXXPXXPPXHPGXPFXPPPXXXPPKXX 963
P P P + P PP+ P V PP P P PP PP
Sbjct: 474 PSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPI--PGAPGMPNLNMSQPP-MVPPGMA 530
Query: 964 GPPPLP 981
PP +P
Sbjct: 531 LPPGMP 536
>SPAC13F5.01c |msh1|SPAC23C11.18c|MutS protein homolog
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 941
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 533 LHQRGPTPSRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPALC 673
LH T ++SG+ +T+ + +V I + +D +E LP LC
Sbjct: 369 LHAINKTVTKSGSRLLTRRLCAPSTNIVEINNRLDLVEKFKLLPELC 415
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +3
Query: 837 PXPXLPXPXAARPSXPXXPXXAPXXPRXXLPXPPXXSXPQXXRPP 971
P P P AA S P P P PP + PQ + P
Sbjct: 209 PPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYPQAPQQP 253
>SPBC56F2.12 |ilv5||acetohydroxyacid
reductoisomerase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -2
Query: 120 GHEKIRDL--NRIPNFRRKWPKQXKSNKNLKEFPSSESVR 7
G+E R L N PN+R + K+ + +NL+ + + E VR
Sbjct: 356 GNEAKRSLEYNSAPNYRELYDKELEEIRNLEIWKAGEVVR 395
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 349 KAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILE 450
KAVL LK P IN F + L + +F++LE
Sbjct: 463 KAVLTGILKYWPRINSFKELLFLNEIEDIFEVLE 496
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +3
Query: 858 PXAARPSXPXXPXXAP-XXPRXXLPXPPXXSXPQXXRPPPP 977
P PS P P P + +P PP PPPP
Sbjct: 115 PSRGTPSLPSRPGSRPSVLNQEQVPPPPVRPNVMSQMPPPP 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,247,888
Number of Sequences: 5004
Number of extensions: 59879
Number of successful extensions: 365
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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