Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G17
         (962 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    29   0.21 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   1.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    26   1.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            26   2.0  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 29.1 bits (62), Expect = 0.21
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 223 DGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWCESRR 345
           D   A   QH+  RP+RS + NP       GR H  C+SRR
Sbjct: 273 DENPAGAQQHLSHRPQRSTRKNP------AGRQHDRCDSRR 307


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 397 NGDATVLFVLTRVSETGLSGSRTSND 320
           +GD T L  +T ++E+G+  S TS D
Sbjct: 194 SGDETDLDAITTLAESGIPSSNTSGD 219



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 321 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 431
           S L + PER  SLT++  + + AS   L  S  SS+L
Sbjct: 666 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 702


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 397 NGDATVLFVLTRVSETGLSGSRTSND 320
           +GD T L  +T ++E+G+  S TS D
Sbjct: 195 SGDETDLDAITTLAESGIPSSNTSGD 220



 Score = 25.0 bits (52), Expect = 3.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 321 SLLVREPERPVSLTRVRTNKTVASPLNLRPSLCSSSL 431
           S L + PER  SLT++  + + AS   L  S  SS+L
Sbjct: 667 SNLPKIPERKSSLTKLNRSNSTASNGTLERSYSSSTL 703


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.8 bits (54), Expect = 2.0
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -3

Query: 510 SIKLIKKPFSLFSRWSGFVMNTKSFSSSSKNIEMAVDL 397
           +++L+KKP SL S W       +       N ++A+ L
Sbjct: 156 TVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAIAL 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,042
Number of Sequences: 2352
Number of extensions: 15690
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 105843456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)