Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_G16
(950 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical pr... 35 0.074
Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical pr... 33 0.30
U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450... 32 0.69
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 1.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.2
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 29 4.9
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 29 6.5
>Z75711-5|CAB00036.1| 423|Caenorhabditis elegans Hypothetical
protein K02B12.7 protein.
Length = 423
Score = 35.1 bits (77), Expect = 0.074
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 414 ANSAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLK-QKQPEDSKRPVAEPTETTSTN 590
+ + FN +LK NLP +EG + LK T P++ +K+ E S +PV + T+ N
Sbjct: 310 SQNEFNDWLKQSNLPRG-TTEGGDHLSNEELKPTEPVETKKKKERSVKPVQSKEKVTAEN 368
Query: 591 VSREEMEFTTESXRAGR*RPLGDSPQ 668
V ++ T + +P +P+
Sbjct: 369 VEDDDSSSTITQFESSFNKPKTTAPR 394
>Z74046-1|CAA98556.2| 178|Caenorhabditis elegans Hypothetical
protein ZC116.1 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 93 LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 182
L LC LLA SA YY S + PY++Y P
Sbjct: 5 LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34
>U64847-4|AAB04873.1| 492|Caenorhabditis elegans Cytochrome p450
family protein 14A5 protein.
Length = 492
Score = 31.9 bits (69), Expect = 0.69
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 534 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 430
AF + G F R R P L HP G VFSS D
Sbjct: 82 AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 471 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 602
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 492 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 602
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 471 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 602
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 492 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 602
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 471 SEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 602
+E S + DV KI PL+Q Q + VA P+E T +V +E
Sbjct: 3367 AEPSEPTQADVPKIAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3410
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 492 EKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSRE 602
+ DV K+ PL+Q Q + VA P+E T +V +E
Sbjct: 3448 QADVPKVAAPLEQSQIQQEVPTVAAPSEPTQADVPKE 3484
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +3
Query: 420 SAFNHYLKIQNLPWDVNSEGSWVYEKDVLKITFPLKQKQPEDSKRPVAEPTETTSTNVSR 599
S F Y K+++ D + ++ Y+K T P+ QK + S A T ST S
Sbjct: 5 SQFTAYKKVESDEQDSEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSS 64
Query: 600 EEMEFTTES 626
+ + +S
Sbjct: 65 KRYTSSQQS 73
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 522 LKQKQPEDSKRPVAEPTETTSTNVSRE 602
LK+K+P S +PV++P+ T V +E
Sbjct: 239 LKKKEPSTSVKPVSDPSPTKKVPVKKE 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,475,292
Number of Sequences: 27780
Number of extensions: 343944
Number of successful extensions: 1461
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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