Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G16
         (950 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative severa...    31   1.1  
At1g22060.1 68414.m02759 expressed protein                             31   1.1  
At1g52560.1 68414.m05933 26.5 kDa class I small heat shock prote...    29   3.4  
At3g18370.1 68416.m02336 C2 domain-containing protein contains P...    29   6.0  
At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5) (A...    29   6.0  

>At5g08110.1 68418.m00946 DEAD/DEAH box helicase, putative several
           putative ATP-dependent helicases
          Length = 1058

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 24/112 (21%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = +3

Query: 318 VEGDKYQISIHLPGYEQKDINVKAKNGVLMVQANSAFNHYLKIQNLPWDVNSEGSWVYEK 497
           + G+   + +   G   +D+    K+      ++S F+ Y+K + L  D       + + 
Sbjct: 20  INGESTTVQVSSDG-TIRDLKKALKSCFPPASSSSNFHLYIKGEKLKLDTRVAAITINDG 78

Query: 498 DVLKITFPLKQKQPEDSKRP-VAEPTETTS-TNVSREEMEFTTESXRAGR*R 647
           D+L + FP K+K+   + +P +++P+  +S T+  ++E     E    G  R
Sbjct: 79  DILGL-FPFKKKELRQTPKPDLSKPSSLSSRTSTMKDENAKRAEDHCVGEKR 129


>At1g22060.1 68414.m02759 expressed protein
          Length = 1999

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 201  ESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINE 311
            E MLDT   +S++  E++ + +   +LSLKF  +  E
Sbjct: 1932 EEMLDTKGRYSSMETELREMHDRYSQLSLKFAEVEGE 1968


>At1g52560.1 68414.m05933 26.5 kDa class I small heat shock
           protein-like (HSP26.5-P) contains Pfam profile: PF00011
           Hsp20/alpha crystallin family; identified in Scharf,
           K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
          Length = 232

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/79 (15%), Positives = 40/79 (50%)
 Frame = +3

Query: 183 FSPYVRESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEGRVEGDKYQISIHLPGY 362
           F+P + E    T  + + L    ++++ +    ++    ++ + + + D Y++   +PG 
Sbjct: 88  FTPTLNEFFPPT--IGNTLIQATENMNRIFDNFNVNPFQLMGQVKEQDDCYKLRYEVPGL 145

Query: 363 EQKDINVKAKNGVLMVQAN 419
            ++D+ +   +G+L ++ +
Sbjct: 146 TKEDVKITVNDGILTIKGD 164


>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
           profile: PF00168 C2 domain
          Length = 815

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 243 NEMQHLDNMMKELSLKFPSIINEGRVEG 326
           N+   L N MK++ +KF ++I++G +EG
Sbjct: 735 NKALLLSNQMKQVMIKFQNLIDDGDLEG 762


>At1g16540.1 68414.m01981 molybdenum cofactor sulfurase (LOS5)
           (ABA3) identical to molybdenum cofactor sulfurase
           (LOS5/ABA3) [Arabidopsis thaliana] GI:15407262;
           supporting cDNA gi|15407261|gb|AY034895.1|
          Length = 819

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -2

Query: 589 FVEVVSVGSATGLLLSSGCFCFSGKVIFNTSFS*TQLPSEFTSQGRFC 446
           ++EV  + S +G+ L +GCFC  G        S ++L S     G  C
Sbjct: 410 YLEVEKLASLSGIQLRTGCFCNPGACAKYLELSHSELRSN-VEAGHIC 456


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,607,531
Number of Sequences: 28952
Number of extensions: 321343
Number of successful extensions: 1607
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2285480280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)