Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G15
         (946 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0023 - 7151465-7152111,7152222-7152405                           30   3.1  
12_02_1174 - 26696869-26698191                                         29   4.1  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   7.1  

>10_03_0023 - 7151465-7152111,7152222-7152405
          Length = 276

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
 Frame = +2

Query: 644 IFFPNFLXEIXXPYXXPPXXGFPIPX----PXNPGAIVXXFPXGSHXXLLXLXXPXPTPP 811
           IFFP  L  +  P   P   G PIP     P  P  +   FP  S   +L    P P P 
Sbjct: 168 IFFPP-LPLVPEP---PNIGGVPIPPNPITPAPPSLVPPVFPTPSPPSILPPLTPQPPPS 223

Query: 812 XXXGPQXPSXXKXXXXXPPP 871
               P  P         PPP
Sbjct: 224 SLIPPVLPLPLLNPPPPPPP 243


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 28/136 (20%), Positives = 35/136 (25%)
 Frame = +2

Query: 464 PXGXPPPXXGXXGPXFXXPPXKXXPPXSXFXXKISPRGXXXPXXXXXXXXXXXXXXQXXK 643
           P   PPP      P    PP    PP       + P     P                  
Sbjct: 137 PPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPP-VVQPKPQPPPSLQPPSPPPPPP 195

Query: 644 IFFPNFLXEIXXPYXXPPXXGFPIPXPXNPGAIVXXFPXGSHXXLLXLXXPXPTPPXXXG 823
              P+    +  P   PP    P P P  P   V     G    ++      P PP    
Sbjct: 196 TRPPSVKPPVVQPKPQPPPT-LPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAP 254

Query: 824 PQXPSXXKXXXXXPPP 871
            + P   +     PPP
Sbjct: 255 VKMPRVLEPKPSPPPP 270


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = +2

Query: 692 PPXXGFPIPXPXNPGAIVXXFPXGSHXXLLXLXXPXPTPP 811
           PP   FP P P  P A    FP      +     P P PP
Sbjct: 255 PPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPP 294


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,193,642
Number of Sequences: 37544
Number of extensions: 206873
Number of successful extensions: 373
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)