Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G14
         (934 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.5  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.9  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 577 PQFFLILRRMSSVTVSHINIYWLGVKXEEALEQAVSLEG 461
           P  FL+ R   ++  S + I WL V  +  +   VSL G
Sbjct: 529 PAPFLLKRENYTLPASAVGIAWLYVDNDCCIRYDVSLSG 567


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +1

Query: 283 PILPSKIDDVQLDPNRRYVRSVTNPENNEASIEH 384
           PI     DD+  +    + +S+TN   +  +++H
Sbjct: 284 PIWTRNADDISQEEYGEFYKSLTNDWEDHLAVKH 317


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +1

Query: 796 PPPFXVXPPDNXXXFPPXPTP 858
           PPP    PPD+     P   P
Sbjct: 280 PPPHVYNPPDHIQQATPYSAP 300


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,493
Number of Sequences: 336
Number of extensions: 3880
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)