BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP01_F_G12 (1023 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.028 SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 34 0.037 SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.26 SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 29 0.80 SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 29 0.80 SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 29 1.1 SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 1.4 SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.4 SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.4 SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 28 2.4 SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 3.2 SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub... 26 7.4 SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.4 SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 9.8 SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 9.8 SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 26 9.8 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 34.3 bits (75), Expect = 0.028 Identities = 37/141 (26%), Positives = 44/141 (31%), Gaps = 2/141 (1%) Frame = +1 Query: 502 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNT 681 P T P P S PP K++ + S PP + S I + S P PS Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSS-GAPSAPPPVPAPSSEIPS---IPAPSGAPPVP-APSGI 1091 Query: 682 TGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPL-XXKXWPPXP-XXXXXPX 855 P PP P P P P S PP P+ PP P P Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151 Query: 856 GPTXKKFXGXPPXFLAGPXXP 918 P P +A P P Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVP 1172 Score = 28.7 bits (61), Expect = 1.4 Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 6/93 (6%) Frame = +1 Query: 661 PLTPSN--TTGTXXPXPHXPPXPP---PXXTKXPPPCSSXXP-PRXXXXXLXXPLXXKXW 822 PL SN ++ T P PP P P T P + P P+ PL Sbjct: 972 PLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADA 1031 Query: 823 PPXPXXXXXPXGPTXKKFXGXPPXFLAGPXXPP 921 PP P P P P P PP Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064 Score = 28.7 bits (61), Expect = 1.4 Identities = 23/93 (24%), Positives = 26/93 (27%), Gaps = 2/93 (2%) Frame = +1 Query: 649 TVIAPLTPSNTTGTXX-PXPHX-PPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXW 822 +V AP P + P P PP P P P P S PP P+ Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157 Query: 823 PPXPXXXXXPXGPTXKKFXGXPPXFLAGPXXPP 921 P P G PP PP Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190 Score = 26.6 bits (56), Expect = 5.6 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = +1 Query: 649 TVIAPLTPSNTTG---TXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774 +V AP P+ ++G P PP PPP P S PP Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209 Score = 26.2 bits (55), Expect = 7.4 Identities = 12/35 (34%), Positives = 13/35 (37%) Frame = +1 Query: 670 PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774 PS P PP PPP P S+ PP Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228 >SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 800 Score = 33.9 bits (74), Expect = 0.037 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Frame = +1 Query: 496 VTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSST--VIAPLT 669 VTP P S S PP +T T S P +++ S T + T +ST V + Sbjct: 301 VTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVP 360 Query: 670 PSNTTGTXXPXP 705 P++T+ T P P Sbjct: 361 PTSTSSTSTPPP 372 Score = 33.5 bits (73), Expect = 0.049 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%) Frame = +1 Query: 496 VTPKTKPARKSPGSLP-PCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP-LT 669 +TP P S S+P P T+ + S P T ST + + + S+T + P + Sbjct: 247 ITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306 Query: 670 PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXP 771 P++T+ T P PPP T SS P Sbjct: 307 PTSTSSTSTP-------PPPASTSSTGTSSSPLP 333 Score = 31.5 bits (68), Expect = 0.20 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = +1 Query: 496 VTPKTKPARKSPGSLP-PCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT- 669 +TP P S S+P P T+ + S P T ST S T + SS++ P+T Sbjct: 191 ITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTST-SCTTSTSIPTGGSSSLSTPITP 249 Query: 670 ---PSNTTGTXXPXP 705 P++T+ T P P Sbjct: 250 TVPPTSTSSTSIPIP 264 Score = 31.1 bits (67), Expect = 0.26 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 1/84 (1%) Frame = +1 Query: 514 PARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKV-LVMTVSSTVIAPLTPSNTTGT 690 P S + P T +S S PP ST S+ T L T +S + P T Sbjct: 293 PTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNST 352 Query: 691 XXPXPHXPPXPPPXXTKXPPPCSS 762 P PP + PPP S+ Sbjct: 353 TPVTPTVPPTSTSSTSTPPPPAST 376 Score = 28.3 bits (60), Expect = 1.8 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%) Frame = +1 Query: 487 LHSVTPKTKPARKSPGSLPPCW-KTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP 663 L++ TP T P S S W TT T S T+ST +T T ++ + Sbjct: 598 LYTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSIPLTSTNRTSTTFTSSTSI 657 Query: 664 LTPSNTTGT 690 T S++T T Sbjct: 658 STSSSSTAT 666 Score = 27.9 bits (59), Expect = 2.4 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 10/100 (10%) Frame = +1 Query: 493 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMT--VSSTVIAPL 666 S P T + + S+PP +T + + PP + S+ S+ + SS+ + Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335 Query: 667 TPSNTTGTXXP------XPHXPPXPP--PXXTKXPPPCSS 762 + S TT T P P P PP T PPP +S Sbjct: 336 STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS 375 Score = 27.9 bits (59), Expect = 2.4 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Frame = +1 Query: 493 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMT--VSSTVIAPL 666 S P T + + S+PP +T + + PP + S+ S+ + SS+ + Sbjct: 330 SPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLST 389 Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXP 771 + S TT T P P T PP SS P Sbjct: 390 STSCTTSTSIPPTGNSTTP---VTPTVPPTSSSTP 421 >SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual Length = 309 Score = 31.1 bits (67), Expect = 0.26 Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Frame = +1 Query: 493 SVTPKTKPARKSPGS--LPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPL 666 S P + PA +P S PP T+ S PP + ++ I K + S++ P Sbjct: 121 SAAPPSAPAPPTPQSELRPP---TSAPPRPSIPPPSPASAPPIPSKA--PPIPSSLPPPA 175 Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXP 771 P+ + P P PP K PPP S P Sbjct: 176 QPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210 Score = 27.1 bits (57), Expect = 4.3 Identities = 15/57 (26%), Positives = 18/57 (31%) Frame = +1 Query: 658 APLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPP 828 AP PS + P P PP + PPP P + P PP Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199 >SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Schizosaccharomyces pombe|chr 1|||Manual Length = 507 Score = 29.5 bits (63), Expect = 0.80 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 578 DLEVNSVVFQHGGKLPGDFLAGFVFGVTECNFVV 477 DLE N +V Q+ G G+FL G FG + FV+ Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVL 444 >SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual Length = 244 Score = 29.5 bits (63), Expect = 0.80 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Frame = +1 Query: 490 HSVTPKTKPARKSPGSLPPCWKTTEF--TSRSCPPRT--NST*SSITRKVLVMTVSSTVI 657 H+ T T P S + TT T+ + PP T NST + + V T +TV+ Sbjct: 77 HNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTHVNT--TTVV 134 Query: 658 APLTPSNTTGTXXPXPH 708 P T NTT P H Sbjct: 135 PPTTHVNTTTVVPPTTH 151 Score = 28.3 bits (60), Expect = 1.8 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%) Frame = +1 Query: 496 VTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTN-ST*SSITRKVLVMTVSSTVIAPLTP 672 V P + + ++PP T+ T+ + PP T+ +T ++ + ++TV+ P T Sbjct: 70 VPPPSTSHNSTTTTVPPT--TSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTH 127 Query: 673 SNTTGTXXPXPH 708 NTT P H Sbjct: 128 VNTTTVVPPTTH 139 Score = 26.6 bits (56), Expect = 5.6 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +1 Query: 556 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXP 699 +T TS PP T+ ++ T ++T + P T NTT T P Sbjct: 63 STNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAP 110 >SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schizosaccharomyces pombe|chr 3|||Manual Length = 215 Score = 29.1 bits (62), Expect = 1.1 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = +3 Query: 222 ETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 365 ET K S K +K + + +++++ K NT++ A Q W+K KE Sbjct: 128 ETPKKKHSLIRKRRKSPLDSSSAQKVLKKNKLNTLEQAQQNWSKYIKE 175 >SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 574 Score = 28.7 bits (61), Expect = 1.4 Identities = 22/69 (31%), Positives = 31/69 (44%) Frame = +1 Query: 568 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXP 747 TS S PP S SS + V ++S+ P+ P + GT P+ PP P + P Sbjct: 225 TSTSAPPIPPSIPSSRPPE-RVPSLSAPAPPPIPPPSN-GTVSSPPNSPPRPIAPVSMNP 282 Query: 748 PPCSSXXPP 774 S+ PP Sbjct: 283 AINSTSKPP 291 Score = 27.1 bits (57), Expect = 4.3 Identities = 31/132 (23%), Positives = 41/132 (31%), Gaps = 2/132 (1%) Frame = +1 Query: 502 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP--S 675 P R +P PP ++ T R PP ++S +++ AP P Sbjct: 352 PLPPQGRSAPPPPPP--RSAPSTGRQPPPLSSSR--AVSNPPAPPPAIPGRSAPALPPLG 407 Query: 676 NTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPX 855 N + T P PP PP PP + P P PP P P Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP--AGMPA 465 Query: 856 GPTXKKFXGXPP 891 P PP Sbjct: 466 APPLPPAAPAPP 477 >SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF hand and WH2 motif |Schizosaccharomyces pombe|chr 1|||Manual Length = 1794 Score = 27.9 bits (59), Expect = 2.4 Identities = 16/56 (28%), Positives = 18/56 (32%) Frame = +1 Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXP 834 TP + P P PPP PPP S+ P PL P P Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744 >SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 296 Score = 27.9 bits (59), Expect = 2.4 Identities = 15/49 (30%), Positives = 16/49 (32%) Frame = +1 Query: 715 PXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPXGP 861 P PPP PP SS PP P +PP P P Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPP-QQAPYPPVQAYPQAPQQP 253 >SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 1237 Score = 27.9 bits (59), Expect = 2.4 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 189 QLYMSVVIGEY-ETAIAKCSEYLKEKKGEVIKEAVKRLIE 305 Q+++++V+ Y A+ EYL+EK I + K ++E Sbjct: 556 QIFINIVLPNYIRAALVVAKEYLREKANADINDLTKDMLE 595 >SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 462 Score = 27.5 bits (58), Expect = 3.2 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%) Frame = +1 Query: 529 PGSLPPCWKTTEFTSRSCPPRTNST*SSITR----KVLVMTVSSTVIAPLTPSNTTGTXX 696 P +P K+ T +S P R S +++ KV SST TP++++ T Sbjct: 190 PARVPSPKKSLSSTIKSPPSRVKLPTSILSKSPPLKVPNKNRSSTFSPLRTPTSSSKTFV 249 Query: 697 PXPHXPPXPPPXXTK 741 H P PP TK Sbjct: 250 IVDHSTPSPPSIRTK 264 >SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual Length = 409 Score = 26.2 bits (55), Expect = 7.4 Identities = 10/17 (58%), Positives = 14/17 (82%) Frame = -2 Query: 680 VFEGVSGAITVDDTVIT 630 V G+ GAIT+DD++IT Sbjct: 117 VAAGIEGAITLDDSIIT 133 >SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family |Schizosaccharomyces pombe|chr 1|||Manual Length = 1420 Score = 26.2 bits (55), Expect = 7.4 Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 1/74 (1%) Frame = +1 Query: 643 SSTVIAP-LTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKX 819 S ++P + P+ T P P PP PPP S P L + Sbjct: 215 SGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNI-- 272 Query: 820 WPPXPXXXXXPXGP 861 PP P P P Sbjct: 273 -PPPPATPSQPPRP 285 >SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosaccharomyces pombe|chr 3|||Manual Length = 1140 Score = 25.8 bits (54), Expect = 9.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 Query: 426 LINKRDHHALKLIDQQNHNKIAFGDSKDKTS 518 L+ K+D A K+ DQ H K+ +DK S Sbjct: 496 LLTKKDSIANKISDQSEHLKVLEDVQRDKVS 526 >SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 273 Score = 25.8 bits (54), Expect = 9.8 Identities = 15/49 (30%), Positives = 17/49 (34%) Frame = -1 Query: 906 PGQKGXGXXXKFFXGGPXRGXXGXWXGGPXFXXKGXXKXGXXXSGWXXG 760 PG G G F G G G + GGP G G G+ G Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250 >SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 417 Score = 25.8 bits (54), Expect = 9.8 Identities = 16/71 (22%), Positives = 31/71 (43%) Frame = -3 Query: 325 MVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVAL 146 M F ++ T + +PF R+ HL S +T+ +Y+ + T ++++ Sbjct: 1 MRFFETLALALLTTGALAAPF---RHPHHLLNKRDVSVVTSKVYAYTTVTLEAAASAIST 57 Query: 145 EASAHTARTKA 113 +A A T A Sbjct: 58 NGAAKEAATAA 68 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,432,516 Number of Sequences: 5004 Number of extensions: 69612 Number of successful extensions: 353 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 257 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 322 length of database: 2,362,478 effective HSP length: 73 effective length of database: 1,997,186 effective search space used: 533248662 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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