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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G12
         (1023 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    34   0.028
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1...    34   0.037
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    31   0.26 
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc...    29   0.80 
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2...    29   0.80 
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi...    29   1.1  
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    29   1.4  
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit...    28   2.4  
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ...    28   2.4  
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ...    28   2.4  
SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||...    27   3.2  
SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha sub...    26   7.4  
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ...    26   7.4  
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac...    26   9.8  
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe...    26   9.8  
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p...    26   9.8  

>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 34.3 bits (75), Expect = 0.028
 Identities = 37/141 (26%), Positives = 44/141 (31%), Gaps = 2/141 (1%)
 Frame = +1

Query: 502  PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNT 681
            P T P    P S PP  K++   + S PP   +  S I     +   S     P  PS  
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSS-GAPSAPPPVPAPSSEIPS---IPAPSGAPPVP-APSGI 1091

Query: 682  TGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPL-XXKXWPPXP-XXXXXPX 855
                 P    PP P P     P P  S  PP         P+      PP P      P 
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151

Query: 856  GPTXKKFXGXPPXFLAGPXXP 918
             P        P   +A P  P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVP 1172



 Score = 28.7 bits (61), Expect = 1.4
 Identities = 25/93 (26%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
 Frame = +1

Query: 661  PLTPSN--TTGTXXPXPHXPPXPP---PXXTKXPPPCSSXXP-PRXXXXXLXXPLXXKXW 822
            PL  SN  ++ T  P    PP  P   P  T    P +   P P+        PL     
Sbjct: 972  PLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADA 1031

Query: 823  PPXPXXXXXPXGPTXKKFXGXPPXFLAGPXXPP 921
            PP P     P  P        P      P  PP
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064



 Score = 28.7 bits (61), Expect = 1.4
 Identities = 23/93 (24%), Positives = 26/93 (27%), Gaps = 2/93 (2%)
 Frame = +1

Query: 649  TVIAPLTPSNTTGTXX-PXPHX-PPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXW 822
            +V AP  P  +      P P   PP P P     P P  S  PP         P+     
Sbjct: 1098 SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG 1157

Query: 823  PPXPXXXXXPXGPTXKKFXGXPPXFLAGPXXPP 921
             P          P      G PP        PP
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190



 Score = 26.6 bits (56), Expect = 5.6
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = +1

Query: 649  TVIAPLTPSNTTG---TXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774
            +V AP  P+ ++G      P    PP PPP      P  S   PP
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209



 Score = 26.2 bits (55), Expect = 7.4
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +1

Query: 670  PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774
            PS       P    PP PPP      P  S+  PP
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228


>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 800

 Score = 33.9 bits (74), Expect = 0.037
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
 Frame = +1

Query: 496 VTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSST--VIAPLT 669
           VTP   P   S  S PP   +T  T  S  P  +++ S  T   +  T +ST  V   + 
Sbjct: 301 VTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVP 360

Query: 670 PSNTTGTXXPXP 705
           P++T+ T  P P
Sbjct: 361 PTSTSSTSTPPP 372



 Score = 33.5 bits (73), Expect = 0.049
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +1

Query: 496 VTPKTKPARKSPGSLP-PCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP-LT 669
           +TP   P   S  S+P P   T+   + S P  T ST  + +  +     S+T + P + 
Sbjct: 247 ITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPPTGNSTTPVTPTVP 306

Query: 670 PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXP 771
           P++T+ T  P       PPP  T      SS  P
Sbjct: 307 PTSTSSTSTP-------PPPASTSSTGTSSSPLP 333



 Score = 31.5 bits (68), Expect = 0.20
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
 Frame = +1

Query: 496 VTPKTKPARKSPGSLP-PCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLT- 669
           +TP   P   S  S+P P   T+   + S P  T ST S  T   +    SS++  P+T 
Sbjct: 191 ITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTST-SCTTSTSIPTGGSSSLSTPITP 249

Query: 670 ---PSNTTGTXXPXP 705
              P++T+ T  P P
Sbjct: 250 TVPPTSTSSTSIPIP 264



 Score = 31.1 bits (67), Expect = 0.26
 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
 Frame = +1

Query: 514 PARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKV-LVMTVSSTVIAPLTPSNTTGT 690
           P   S   + P    T  +S S PP   ST S+ T    L  T +S   +   P     T
Sbjct: 293 PTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNST 352

Query: 691 XXPXPHXPPXPPPXXTKXPPPCSS 762
               P  PP      +  PPP S+
Sbjct: 353 TPVTPTVPPTSTSSTSTPPPPAST 376



 Score = 28.3 bits (60), Expect = 1.8
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
 Frame = +1

Query: 487 LHSVTPKTKPARKSPGSLPPCW-KTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAP 663
           L++ TP T P   S  S    W  TT  T  S    T+ST   +T      T  ++  + 
Sbjct: 598 LYTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSIPLTSTNRTSTTFTSSTSI 657

Query: 664 LTPSNTTGT 690
            T S++T T
Sbjct: 658 STSSSSTAT 666



 Score = 27.9 bits (59), Expect = 2.4
 Identities = 27/100 (27%), Positives = 41/100 (41%), Gaps = 10/100 (10%)
 Frame = +1

Query: 493 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMT--VSSTVIAPL 666
           S  P T  +  +  S+PP   +T   + + PP + S+ S+        +   SS+ +   
Sbjct: 276 SPLPTTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPST 335

Query: 667 TPSNTTGTXXP------XPHXPPXPP--PXXTKXPPPCSS 762
           + S TT T  P       P  P  PP     T  PPP +S
Sbjct: 336 STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPAS 375



 Score = 27.9 bits (59), Expect = 2.4
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
 Frame = +1

Query: 493 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMT--VSSTVIAPL 666
           S  P T  +  +  S+PP   +T   + + PP + S+ S+        +   SS+ +   
Sbjct: 330 SPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLST 389

Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXP 771
           + S TT T  P       P    T   PP SS  P
Sbjct: 390 STSCTTSTSIPPTGNSTTP---VTPTVPPTSSSTP 421


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 31.1 bits (67), Expect = 0.26
 Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
 Frame = +1

Query: 493 SVTPKTKPARKSPGS--LPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPL 666
           S  P + PA  +P S   PP   T+     S PP + ++   I  K     + S++  P 
Sbjct: 121 SAAPPSAPAPPTPQSELRPP---TSAPPRPSIPPPSPASAPPIPSKA--PPIPSSLPPPA 175

Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXP 771
            P+    +    P  P   PP   K PPP  S  P
Sbjct: 176 QPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210



 Score = 27.1 bits (57), Expect = 4.3
 Identities = 15/57 (26%), Positives = 18/57 (31%)
 Frame = +1

Query: 658 APLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPP 828
           AP  PS    +    P  P   PP  +  PPP     P +        P      PP
Sbjct: 143 APPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199


>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
           Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 507

 Score = 29.5 bits (63), Expect = 0.80
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -2

Query: 578 DLEVNSVVFQHGGKLPGDFLAGFVFGVTECNFVV 477
           DLE N +V Q+ G   G+FL G  FG  +  FV+
Sbjct: 411 DLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVL 444


>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 29.5 bits (63), Expect = 0.80
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
 Frame = +1

Query: 490 HSVTPKTKPARKSPGSLPPCWKTTEF--TSRSCPPRT--NST*SSITRKVLVMTVSSTVI 657
           H+ T  T P   S  +      TT    T+ + PP T  NST + +     V T  +TV+
Sbjct: 77  HNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTHVNT--TTVV 134

Query: 658 APLTPSNTTGTXXPXPH 708
            P T  NTT    P  H
Sbjct: 135 PPTTHVNTTTVVPPTTH 151



 Score = 28.3 bits (60), Expect = 1.8
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +1

Query: 496 VTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTN-ST*SSITRKVLVMTVSSTVIAPLTP 672
           V P +     +  ++PP   T+  T+ + PP T+ +T ++       +  ++TV+ P T 
Sbjct: 70  VPPPSTSHNSTTTTVPPT--TSMNTTTTVPPTTSLNTTTTTAPPTTHVNSTTTVVPPTTH 127

Query: 673 SNTTGTXXPXPH 708
            NTT    P  H
Sbjct: 128 VNTTTVVPPTTH 139



 Score = 26.6 bits (56), Expect = 5.6
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 556 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXP 699
           +T  TS   PP T+   ++ T        ++T + P T  NTT T  P
Sbjct: 63  STNITSIVPPPSTSHNSTTTTVPPTTSMNTTTTVPPTTSLNTTTTTAP 110


>SPCC576.13 |swc5||chromatin remodeling complex subunit
           Swc5|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 215

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 222 ETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 365
           ET   K S   K +K  +   + +++++  K NT++ A Q W+K  KE
Sbjct: 128 ETPKKKHSLIRKRRKSPLDSSSAQKVLKKNKLNTLEQAQQNWSKYIKE 175


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 22/69 (31%), Positives = 31/69 (44%)
 Frame = +1

Query: 568 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXP 747
           TS S PP   S  SS   +  V ++S+    P+ P +  GT    P+ PP P    +  P
Sbjct: 225 TSTSAPPIPPSIPSSRPPE-RVPSLSAPAPPPIPPPSN-GTVSSPPNSPPRPIAPVSMNP 282

Query: 748 PPCSSXXPP 774
              S+  PP
Sbjct: 283 AINSTSKPP 291



 Score = 27.1 bits (57), Expect = 4.3
 Identities = 31/132 (23%), Positives = 41/132 (31%), Gaps = 2/132 (1%)
 Frame = +1

Query: 502 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP--S 675
           P     R +P   PP  ++   T R  PP ++S   +++             AP  P   
Sbjct: 352 PLPPQGRSAPPPPPP--RSAPSTGRQPPPLSSSR--AVSNPPAPPPAIPGRSAPALPPLG 407

Query: 676 NTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPX 855
           N + T  P    PP  PP      PP +    P         P      PP P     P 
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP--AGMPA 465

Query: 856 GPTXKKFXGXPP 891
            P        PP
Sbjct: 466 APPLPPAAPAPP 477


>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
            hand and WH2 motif |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1794

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 16/56 (28%), Positives = 18/56 (32%)
 Frame = +1

Query: 667  TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXP 834
            TP     +  P     P PPP     PPP S+   P         PL     P  P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744


>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
           Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 296

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 15/49 (30%), Positives = 16/49 (32%)
 Frame = +1

Query: 715 PXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPXGP 861
           P PPP     PP  SS  PP         P     +PP       P  P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPP-QQAPYPPVQAYPQAPQQP 253


>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1237

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 189 QLYMSVVIGEY-ETAIAKCSEYLKEKKGEVIKEAVKRLIE 305
           Q+++++V+  Y   A+    EYL+EK    I +  K ++E
Sbjct: 556 QIFINIVLPNYIRAALVVAKEYLREKANADINDLTKDMLE 595


>SPAC3G9.01 |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 462

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
 Frame = +1

Query: 529 PGSLPPCWKTTEFTSRSCPPRTNST*SSITR----KVLVMTVSSTVIAPLTPSNTTGTXX 696
           P  +P   K+   T +S P R     S +++    KV     SST     TP++++ T  
Sbjct: 190 PARVPSPKKSLSSTIKSPPSRVKLPTSILSKSPPLKVPNKNRSSTFSPLRTPTSSSKTFV 249

Query: 697 PXPHXPPXPPPXXTK 741
              H  P PP   TK
Sbjct: 250 IVDHSTPSPPSIRTK 264


>SPAC26F1.03 |pda1||pyruvate dehydrogenase e1 component alpha
           subunit Pda1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 409

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 680 VFEGVSGAITVDDTVIT 630
           V  G+ GAIT+DD++IT
Sbjct: 117 VAAGIEGAITLDDSIIT 133


>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1420

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
 Frame = +1

Query: 643 SSTVIAP-LTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKX 819
           S   ++P + P+ T     P P  PP PPP         S    P      L   +    
Sbjct: 215 SGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNI-- 272

Query: 820 WPPXPXXXXXPXGP 861
            PP P     P  P
Sbjct: 273 -PPPPATPSQPPRP 285


>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
           Smc6|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1140

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 426 LINKRDHHALKLIDQQNHNKIAFGDSKDKTS 518
           L+ K+D  A K+ DQ  H K+     +DK S
Sbjct: 496 LLTKKDSIANKISDQSEHLKVLEDVQRDKVS 526


>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 273

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 15/49 (30%), Positives = 17/49 (34%)
 Frame = -1

Query: 906 PGQKGXGXXXKFFXGGPXRGXXGXWXGGPXFXXKGXXKXGXXXSGWXXG 760
           PG  G G    F   G   G  G + GGP     G    G    G+  G
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250


>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 417

 Score = 25.8 bits (54), Expect = 9.8
 Identities = 16/71 (22%), Positives = 31/71 (43%)
 Frame = -3

Query: 325 MVFLLPFSIRRFTASLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVAL 146
           M F    ++   T   + +PF   R+  HL      S +T+ +Y+ +  T     ++++ 
Sbjct: 1   MRFFETLALALLTTGALAAPF---RHPHHLLNKRDVSVVTSKVYAYTTVTLEAAASAIST 57

Query: 145 EASAHTARTKA 113
             +A  A T A
Sbjct: 58  NGAAKEAATAA 68


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,432,516
Number of Sequences: 5004
Number of extensions: 69612
Number of successful extensions: 353
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 533248662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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