Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_G12
(1023 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.002
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.002
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 36 0.035
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 36 0.047
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 36 0.047
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 36 0.047
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 36 0.047
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 36 0.047
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 35 0.11
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 35 0.11
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 35 0.11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.14
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.14
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 34 0.19
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 33 0.25
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 33 0.25
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 33 0.33
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.33
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.33
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 32 0.57
AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical... 32 0.76
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.0
AC024870-1|AAF60880.2| 146|Caenorhabditis elegans Hypothetical ... 31 1.0
Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 31 1.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.3
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 1.3
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 1.3
DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated... 31 1.3
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 31 1.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 31 1.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.8
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 30 2.3
AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical... 30 2.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 3.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.1
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 3.1
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 29 4.0
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 29 4.0
U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucos... 29 4.0
U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucos... 29 4.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.0
DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide glyc... 29 4.0
DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide glyc... 29 4.0
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 29 4.0
Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 29 5.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 5.3
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 5.3
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 5.3
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 29 5.3
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 29 7.1
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 7.1
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 7.1
AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical ... 29 7.1
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 29 7.1
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 29 7.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 7.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.1
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical p... 28 9.3
Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical pr... 28 9.3
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 28 9.3
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 28 9.3
U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fb... 28 9.3
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 28 9.3
L25599-3|ABN43087.1| 570|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 9.3
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 28 9.3
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +1
Query: 670 PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXX 849
P +G+ P P PPP PPP + PP P PP P
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Query: 850 PXG--PTXKKFXGXPPXFLAGPXXPPTKR 930
P G P + PP P PP ++
Sbjct: 308 PTGSLPPPQAGGSPPPAGTGSPPPPPRQK 336
Score = 33.9 bits (74), Expect = 0.19
Identities = 23/88 (26%), Positives = 26/88 (29%)
Frame = +1
Query: 658 APLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPX 837
+P P G+ P PPP PPP + PP P PP
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 838 XXXXPXGPTXKKFXGXPPXFLAGPXXPP 921
P P G P AG PP
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 33.5 bits (73), Expect = 0.25
Identities = 25/85 (29%), Positives = 26/85 (30%)
Frame = +1
Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXX 846
T + G P P PPP PP S PP P PP P
Sbjct: 221 TQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-PRTGSPPPPPTGS 279
Query: 847 XPXGPTXKKFXGXPPXFLAGPXXPP 921
P P G PP AG PP
Sbjct: 280 PPPPPA----GGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +1
Query: 670 PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXX 849
P +G+ P P PPP PPP + PP P PP P
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Query: 850 PXG--PTXKKFXGXPPXFLAGPXXPPTKR 930
P G P + PP P PP ++
Sbjct: 329 PTGSLPPPQAGGSPPPAGTGSPPPPPRQK 357
Score = 33.9 bits (74), Expect = 0.19
Identities = 23/88 (26%), Positives = 26/88 (29%)
Frame = +1
Query: 658 APLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPX 837
+P P G+ P PPP PPP + PP P PP
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 838 XXXXPXGPTXKKFXGXPPXFLAGPXXPP 921
P P G P AG PP
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 33.5 bits (73), Expect = 0.25
Identities = 25/85 (29%), Positives = 26/85 (30%)
Frame = +1
Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXX 846
T + G P P PPP PP S PP P PP P
Sbjct: 242 TQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-PRTGSPPPPPTGS 300
Query: 847 XPXGPTXKKFXGXPPXFLAGPXXPP 921
P P G PP AG PP
Sbjct: 301 PPPPPA----GGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 2/89 (2%)
Frame = +1
Query: 670 PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXX 849
P +G+ P P PPP PPP + PP P PP P
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Query: 850 PXG--PTXKKFXGXPPXFLAGPXXPPTKR 930
P G P + PP P PP ++
Sbjct: 314 PTGSLPPPQAGGSPPPAGTGSPPPPPRQK 342
Score = 33.9 bits (74), Expect = 0.19
Identities = 23/88 (26%), Positives = 26/88 (29%)
Frame = +1
Query: 658 APLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPX 837
+P P G+ P PPP PPP + PP P PP
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 838 XXXXPXGPTXKKFXGXPPXFLAGPXXPP 921
P P G P AG PP
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 33.5 bits (73), Expect = 0.25
Identities = 25/85 (29%), Positives = 26/85 (30%)
Frame = +1
Query: 667 TPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXX 846
T + G P P PPP PP S PP P PP P
Sbjct: 227 TQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP-PRTGSPPPPPTGS 285
Query: 847 XPXGPTXKKFXGXPPXFLAGPXXPP 921
P P G PP AG PP
Sbjct: 286 PPPPPA----GGSPPPPRAGSPPPP 306
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 36.3 bits (80), Expect = 0.035
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 493 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP 672
+VT T ++P TT S + PP ++T + +T+ V ST IAP+T
Sbjct: 407 NVTSTTTAPTTESSAIPDVTSTTTTKSSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTM 466
Query: 673 SNTT 684
+TT
Sbjct: 467 PSTT 470
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.047
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
GG GPA++ G P + G G G G + +G GG ++QGGG
Sbjct: 227 GGWGGPAQRGG--PGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW--GGPQQQQGGGG 282
Query: 740 XVXXGGGXGGXWG 702
GGG G WG
Sbjct: 283 WGQQGGGGQGGWG 295
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 773 GGXXEEQGGGXXVXXGGGXGGXWGXGXXVPVVFEGVSGA 657
GG ++Q GG GG GG WG + G SGA
Sbjct: 295 GGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGA 333
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 35.9 bits (79), Expect = 0.047
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPR 777
PL P + P PP PPP T PPP + PPR
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPR 112
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/73 (27%), Positives = 24/73 (32%)
Frame = +1
Query: 616 TRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXL 795
+R + + STVI S P PP PPP PP PP +
Sbjct: 42 SRSSVYSSSKSTVIEVEQSSRQQQVGRPT-ESPPLPPPPLPLSNPPAKPTPPPPPPKPTI 100
Query: 796 XXPLXXKXWPPXP 834
P PP P
Sbjct: 101 RPPPIPASPPPRP 113
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 35.9 bits (79), Expect = 0.047
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPR 777
PL P + P PP PPP T PPP + PPR
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPPR 334
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/73 (27%), Positives = 24/73 (32%)
Frame = +1
Query: 616 TRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXL 795
+R + + STVI S P PP PPP PP PP +
Sbjct: 264 SRSSVYSSSKSTVIEVEQSSRQQQVGRPT-ESPPLPPPPLPLSNPPAKPTPPPPPPKPTI 322
Query: 796 XXPLXXKXWPPXP 834
P PP P
Sbjct: 323 RPPPIPASPPPRP 335
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 35.9 bits (79), Expect = 0.047
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
GG GPA++ G P + G G G G + +G GG ++QGGG
Sbjct: 189 GGWGGPAQRGG--PGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW--GGPQQQQGGGG 244
Query: 740 XVXXGGGXGGXWG 702
GGG G WG
Sbjct: 245 WGQQGGGGQGGWG 257
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 773 GGXXEEQGGGXXVXXGGGXGGXWGXGXXVPVVFEGVSGA 657
GG ++Q GG GG GG WG + G SGA
Sbjct: 257 GGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGA 295
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.047
Identities = 24/73 (32%), Positives = 31/73 (42%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
GG GPA++ G P + G G G G + +G GG ++QGGG
Sbjct: 227 GGWGGPAQRGG--PGAYGGPGGGGQGGYGGDYGGGWGQQGGGGQGGW--GGPQQQQGGGG 282
Query: 740 XVXXGGGXGGXWG 702
GGG G WG
Sbjct: 283 WGQQGGGGQGGWG 295
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 773 GGXXEEQGGGXXVXXGGGXGGXWGXGXXVPVVFEGVSGA 657
GG ++Q GG GG GG WG + G SGA
Sbjct: 295 GGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGA 333
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +1
Query: 658 APLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPX 837
AP+TP T PPP TK PPP ++ PP P PP
Sbjct: 154 APVTPEPTVKNTTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTN 213
Query: 838 XXXXPXGPTXK 870
P K
Sbjct: 214 KEVTTVAPVPK 224
Score = 32.3 bits (70), Expect = 0.57
Identities = 25/90 (27%), Positives = 31/90 (34%), Gaps = 5/90 (5%)
Frame = +1
Query: 499 TPKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP 672
T K P + PP K T PP TN +++ V++ P P
Sbjct: 179 TTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPNPPAP 238
Query: 673 SNTTG---TXXPXPHXPPXPPPXXTKXPPP 753
NTT T P PP P P P P
Sbjct: 239 ENTTAKVETTKPTKAAPPAPTPVPNPVPSP 268
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/73 (31%), Positives = 27/73 (36%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
GG GPA++ G G G GG G GG ++QGGG
Sbjct: 189 GGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGW---GGPQQQQGGGG 245
Query: 740 XVXXGGGXGGXWG 702
GGG G WG
Sbjct: 246 WGQQGGGGQGGWG 258
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 773 GGXXEEQGGGXXVXXGGGXGGXWGXGXXVPVVFEGVSGA 657
GG ++Q GG GG GG WG + G SGA
Sbjct: 258 GGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGA 296
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 34.7 bits (76), Expect = 0.11
Identities = 23/73 (31%), Positives = 27/73 (36%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
GG GPA++ G G G GG G GG ++QGGG
Sbjct: 227 GGWGGPAQRGGPGAYGGPGGGGQGGYGGGNYGGGWGQQGGGGQGGW---GGPQQQQGGGG 283
Query: 740 XVXXGGGXGGXWG 702
GGG G WG
Sbjct: 284 WGQQGGGGQGGWG 296
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 773 GGXXEEQGGGXXVXXGGGXGGXWGXGXXVPVVFEGVSGA 657
GG ++Q GG GG GG WG + G SGA
Sbjct: 296 GGPQQQQQGGWGGPQQGGGGGGWGGQGQQQGGWGGQSGA 334
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/91 (31%), Positives = 30/91 (32%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXX 840
PL +G P PP PPP T PPP P P WPP P
Sbjct: 247 PLMGMAQSGYQGQYPPVPP-PPPSVTPMPPP---MPPTPGMTPRPPPPPSSGMWPPPP-- 300
Query: 841 XXXPXGPTXKKFXGXPPXFLAGPXXPPTKRF 933
P G T PP P PP RF
Sbjct: 301 -PPPPGRTP-----GPPGMPGMPPPPPPSRF 325
Score = 31.5 bits (68), Expect = 1.0
Identities = 32/119 (26%), Positives = 37/119 (31%), Gaps = 3/119 (2%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXX 840
P+ P + T P P PP P PPP S PP P P P
Sbjct: 262 PVPPPPPSVTPMPPP-MPPTPGMTPRPPPPPSSGMWPP-------PPPPPPGRTPGPPGM 313
Query: 841 XXXPXGPTXKKFXGXPPXFLAGPXXPPTKRF---FXXXXXXXXFSQXPFXHLXPPPXXP 1008
P P +F G P P PP R+ S P + PPP P
Sbjct: 314 PGMPPPPPPSRF-GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.14
Identities = 29/91 (31%), Positives = 30/91 (32%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXX 840
PL +G P PP PPP T PPP P P WPP P
Sbjct: 257 PLMGMAQSGYQGQYPPVPP-PPPSVTPMPPP---MPPTPGMTPRPPPPPSSGMWPPPP-- 310
Query: 841 XXXPXGPTXKKFXGXPPXFLAGPXXPPTKRF 933
P G T PP P PP RF
Sbjct: 311 -PPPPGRTP-----GPPGMPGMPPPPPPSRF 335
Score = 31.5 bits (68), Expect = 1.0
Identities = 32/119 (26%), Positives = 37/119 (31%), Gaps = 3/119 (2%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXX 840
P+ P + T P P PP P PPP S PP P P P
Sbjct: 272 PVPPPPPSVTPMPPP-MPPTPGMTPRPPPPPSSGMWPP-------PPPPPPGRTPGPPGM 323
Query: 841 XXXPXGPTXKKFXGXPPXFLAGPXXPPTKRF---FXXXXXXXXFSQXPFXHLXPPPXXP 1008
P P +F G P P PP R+ S P + PPP P
Sbjct: 324 PGMPPPPPPSRF-GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 33.9 bits (74), Expect = 0.19
Identities = 21/73 (28%), Positives = 24/73 (32%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
GG G GG P + G G G GG + GG + GG
Sbjct: 33 GGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNG 92
Query: 740 XVXXGGGXGGXWG 702
GGG G WG
Sbjct: 93 GGGRGGGGRGDWG 105
Score = 29.5 bits (63), Expect = 4.0
Identities = 26/89 (29%), Positives = 29/89 (32%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
G G GG N G G G GG RG G + G G
Sbjct: 106 GNNNGGGGNWGGGGNND---GGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGG 162
Query: 740 XVXXGGGXGGXWGXGXXVPVVFEGVSGAI 654
GGG G G G + EGV GA+
Sbjct: 163 GGRGGGGGRGGGGGGGAGERIAEGVLGAL 191
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 33.5 bits (73), Expect = 0.25
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 712 PPXPPPXXTKXPPPCSSXXPPR 777
PP PPP T PPP + PPR
Sbjct: 249 PPPPPPTTTTAPPPAAPEQPPR 270
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 33.5 bits (73), Expect = 0.25
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 712 PPXPPPXXTKXPPPCSSXXPPR 777
PP PPP T PPP + PPR
Sbjct: 249 PPPPPPTTTTAPPPAAPEQPPR 270
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 502 PKTKPARKSPGSLPPCWKTTE--FTSRSCPPRTNST*SSITRKVLVMTVSSTVIA 660
PKT+P P ++P CW+ F PPR N+T I K + V+A
Sbjct: 418 PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPLIEDKCYAKLGDTLVMA 472
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPXGPTXKKF 876
P H PP PP + PP PP + P + + P P GP F
Sbjct: 300 PRGHFPPPPPHFMGRGMPPPFMPPPPH---FGMGPP---RGFMPPPHPMMFRGGPYPPFF 353
Query: 877 XGXPPXFLAGPXXPPT 924
PP F+ P PPT
Sbjct: 354 PPPPPHFMR-PSSPPT 368
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.1 bits (72), Expect = 0.33
Identities = 23/76 (30%), Positives = 28/76 (36%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPXGPTXKKF 876
P H PP PP + PP PP + P + + P P GP F
Sbjct: 300 PRGHFPPPPPHFMGRGMPPPFMPPPPH---FGMGPP---RGFMPPPHPMMFRGGPYPPFF 353
Query: 877 XGXPPXFLAGPXXPPT 924
PP F+ P PPT
Sbjct: 354 PPPPPHFMR-PSSPPT 368
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 32.3 bits (70), Expect = 0.57
Identities = 25/82 (30%), Positives = 30/82 (36%)
Frame = +1
Query: 526 SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXP 705
S G LPP TT+ S+ + +R + T S TPS P
Sbjct: 1453 SGGPLPPSSSTTKTLSKWRTVNRYTDVQQFSRGSPIRTSSPVPSTQTTPSRP-------P 1505
Query: 706 HXPPXPPPXXTKXPPPCSSXXP 771
PP PP PPP SS P
Sbjct: 1506 QMPPPPPASGKTIPPPPSSSTP 1527
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 32.3 bits (70), Expect = 0.57
Identities = 25/82 (30%), Positives = 30/82 (36%)
Frame = +1
Query: 526 SPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXP 705
S G LPP TT+ S+ + +R + T S TPS P
Sbjct: 1453 SGGPLPPSSSTTKTLSKWRTVNRYTDVQQFSRGSPIRTSSPVPSTQTTPSRP-------P 1505
Query: 706 HXPPXPPPXXTKXPPPCSSXXP 771
PP PP PPP SS P
Sbjct: 1506 QMPPPPPASGKTIPPPPSSSTP 1527
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 32.3 bits (70), Expect = 0.57
Identities = 26/90 (28%), Positives = 32/90 (35%)
Frame = +1
Query: 502 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNT 681
P T + S + TT TS + P T ST + T + T ST P T S T
Sbjct: 274 PSTTSSTTSTSTTTSVVTTTTVTSTTEP--TTSTSTPTTTTTMQTTTPSTTSTPTTTSTT 331
Query: 682 TGTXXPXPHXPPXPPPXXTKXPPPCSSXXP 771
T T PP C+S P
Sbjct: 332 TTTSASTTTISTTKPPTTQIDIEKCTSNCP 361
>AC024202-12|AAF36031.2| 143|Caenorhabditis elegans Hypothetical
protein Y71H2B.1 protein.
Length = 143
Score = 31.9 bits (69), Expect = 0.76
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 192 LYMSVVIGEYETAIA-KCSEYLKEKKGEVIKEAVKRLIE 305
LYM +G+Y+ A KC +Y K+ G+ EA++ I+
Sbjct: 87 LYMQATVGDYDGNTALKCGQYWKKHSGKTQIEAIREYIK 125
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/97 (25%), Positives = 29/97 (29%)
Frame = +1
Query: 646 STVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWP 825
S+ + P+T P P PPP PP PP P+ P
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPP 760
Query: 826 PXPXXXXXPXGPTXKKFXGXPPXFLAGPXXPPTKRFF 936
P P P P P F GP PP F
Sbjct: 761 PPPPPGGCPPPPPPP----PPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/97 (25%), Positives = 29/97 (29%)
Frame = +1
Query: 646 STVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWP 825
S+ + P+T P P PPP PP PP P+ P
Sbjct: 703 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPP 760
Query: 826 PXPXXXXXPXGPTXKKFXGXPPXFLAGPXXPPTKRFF 936
P P P P P F GP PP F
Sbjct: 761 PPPPPGGCPPPPPPP----PPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.0
Identities = 25/97 (25%), Positives = 29/97 (29%)
Frame = +1
Query: 646 STVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWP 825
S+ + P+T P P PPP PP PP P+ P
Sbjct: 286 SSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG--LPPISGGPPP 343
Query: 826 PXPXXXXXPXGPTXKKFXGXPPXFLAGPXXPPTKRFF 936
P P P P P F GP PP F
Sbjct: 344 PPPPPGGCPPPPPPP----PPGGFKGGPPPPPPPGMF 376
>AC024870-1|AAF60880.2| 146|Caenorhabditis elegans Hypothetical
protein Y75B7AR.1 protein.
Length = 146
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 640 VSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774
+SST ++ L + G P P PPP + PPP ++ PP
Sbjct: 2 ISSTKLSILALA-LVGAVLARPQFPGGPPPGMSAVPPPIAAVLPP 45
>Z74029-4|CAA98429.2| 522|Caenorhabditis elegans Hypothetical
protein C45B11.1a protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 104
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 103 S 101
S
Sbjct: 136 S 136
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +3
Query: 246 EYLKEKKGEVIKEA-VKRLIENGKRNTMDFAYQLWTKDGKEIVKSY--FPIQFRVIFTEQ 416
EY + E + VK ++ K+N +D WT+ E +KSY F + R FTE
Sbjct: 187 EYSRLVSNETSRNVFVKSIVSFFKKNDIDGIEIFWTRPKYEDIKSYSSFIQELRSAFTE- 245
Query: 417 TVKLINKRDHHALKLI 464
K N+++ + + LI
Sbjct: 246 LQKRWNRKNEYIISLI 261
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHX----PPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPP 828
PL + GT PH PP PPP P S+ PP + P PP
Sbjct: 591 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 650
Query: 829 XP 834
P
Sbjct: 651 PP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHX----PPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPP 828
PL + GT PH PP PPP P S+ PP + P PP
Sbjct: 417 PLPQAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPP 476
Query: 829 XP 834
P
Sbjct: 477 PP 478
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 712 PPXPPPXXTKXPPPCSSXXPP 774
PP PPP PPP +S PP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSS 762
P P PP PPP PPP S+
Sbjct: 6 PPPPPPPPPPPPAASAPPPSSN 27
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 712 PPXPPPXXTKXPPPCSSXXPP 774
PP PPP PPP ++ PP
Sbjct: 3 PPPPPPPPPPPPPPPAASAPP 23
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.1 bits (67), Expect = 1.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1
Query: 712 PPXPPPXXTKXPPPCSSXXPP 774
PP PPP PPP +S PP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSS 762
P P PP PPP PPP S+
Sbjct: 6 PPPPPPPPPPPPAASAPPPSSN 27
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 712 PPXPPPXXTKXPPPCSSXXPP 774
PP PPP PPP ++ PP
Sbjct: 3 PPPPPPPPPPPPPPPAASAPP 23
>DQ523831-1|ABF71876.1| 522|Caenorhabditis elegans P21-activated
kinase PAK-2 protein.
Length = 522
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = -3
Query: 283 SLITSPFFSFRYSEHLAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKV 104
++I P SFRY+ L ++ SPM ++ S S S+ V + ++ H+ R V
Sbjct: 76 TVIRGPSSSFRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFRPTLPPV 135
Query: 103 S 101
S
Sbjct: 136 S 136
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/79 (30%), Positives = 30/79 (37%)
Frame = +1
Query: 502 PKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNT 681
P + R S + P K T+ S PP T S T +T S ++PL
Sbjct: 765 PSSDVRRDSGSLMSPLLKHVTITNNS-PPSQVITSSPRTNH---LTPKSHTLSPLAVKIE 820
Query: 682 TGTXXPXPHXPPXPPPXXT 738
T P P PP PP T
Sbjct: 821 RSTPLPPPPIPPHSPPHLT 839
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/106 (23%), Positives = 32/106 (30%)
Frame = +1
Query: 571 SRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPP 750
+R PP S +I + T S+ P TP P+ P P P P
Sbjct: 430 TRVAPPPPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSP 489
Query: 751 PCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPXGPTXKKFXGXP 888
P PP + P PP P GP + P
Sbjct: 490 PPPPPLPPIATPSSVPPPP-----PPPPALEQEISGPPTVRLTAVP 530
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = +1
Query: 673 SNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPP 828
++ + + P P PP PPP P P PP PL PP
Sbjct: 1330 TSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/88 (23%), Positives = 30/88 (34%)
Frame = +1
Query: 589 RTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXX 768
++N S ++++ T +ST A P P P PP P PPP
Sbjct: 150 KSNENVSEMSQRSAPRTAASTRTAISAPP----PPRPPPQEPPKPVEQAAPPPPPAPMPV 205
Query: 769 PPRXXXXXLXXPLXXKXWPPXPXXXXXP 852
P + P+ PP P P
Sbjct: 206 PVEKAPEPVPAPVEQIAPPPAPVQDPAP 233
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Frame = -1
Query: 906 PGQKGXGXXXKF-----FXGGPXRGXXGXWXGGPXFXXKG 802
PG+ G G F F GGP G G + GGP F +G
Sbjct: 59 PGRGGFGGNGGFGGNGGFGGGPSYGGRGGFGGGPGFGGRG 98
>AC024805-16|AAK39336.1| 448|Caenorhabditis elegans Hypothetical
protein Y51H7C.1 protein.
Length = 448
Score = 30.3 bits (65), Expect = 2.3
Identities = 34/124 (27%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Frame = +1
Query: 520 RKSPGSLPPC-WKTTE---FTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP--SNT 681
R +PG PP W T +T R+ PP +N + + V +T P TP + T
Sbjct: 165 RYTPGPTPPGPWTYTAPPYYTYRTVPPASNHY------ETVPPAVQTTPQPPCTPRTTTT 218
Query: 682 TGTXXPXPHXPPX---PPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXP 852
T T PP P P T+ P + P P PP P P
Sbjct: 219 TTTTTTTTTLPPCVYTPAPPATQPPRTYPTTTPRPIPTTKTTVPQQWTTLPPGPEPTPGP 278
Query: 853 XGPT 864
GP+
Sbjct: 279 -GPS 281
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 3.1
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +1
Query: 655 IAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXP 834
I P+ S G P P PPP PPP PP P PP P
Sbjct: 11 IIPIASSTFGGCCSMGP-PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPP 69
Query: 835 XXXXXPXGP 861
P P
Sbjct: 70 PPPMCPPPP 78
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 703 PHXPPXPPPXXTKXPPPCSSXXP 771
P PP PPP PPP S P
Sbjct: 64 PPPPPPPPPMCPPPPPPMPSYSP 86
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 3.1
Identities = 24/106 (22%), Positives = 31/106 (29%)
Frame = +1
Query: 571 SRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPP 750
+R PP S +I + S+ P TP P+ P P P P
Sbjct: 437 TRVAPPPPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSP 496
Query: 751 PCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPXGPTXKKFXGXP 888
P PP + P PP P GP + P
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPP-PPPPALEQEISGPPTVRLTAVP 541
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 640 VSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPP 753
V +T P P P PP PPP K PPP
Sbjct: 63 VKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPP 100
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 556 TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTT 684
TTE S + PP ++T + +T+ V ST IAP+T +TT
Sbjct: 393 TTE--SSTTPPVESTTTAPVTKSSSTPPVKSTTIAPVTMPSTT 433
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 553 KTTEFTSRSCP-PRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGT 690
KTT FT+ P P T ST +S T V + S+T TP T T
Sbjct: 434 KTTIFTTTPVPCPTTTSTTTSATTLVPTTSSSTTTTTTTTPVPVTST 480
>U53332-7|AAM15582.1| 379|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform c protein.
Length = 379
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U53332-6|AAL32225.1| 470|Caenorhabditis elegans Ceramide glucosyl
transferase protein3, isoform b protein.
Length = 470
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 712 PPXPPPXXTKXPPPCSSXXPPRXXXXXLXXP-LXXKXWPPXPXXXXXPXGP 861
PP PPP + PPP S PPR P PP P P P
Sbjct: 139 PPPPPPRVPRTPPPRS--PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTP 187
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Frame = +1
Query: 712 PPXPPPXXTKX----PPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXXXXPXGPTXKKFX 879
PP PPP ++ PPP PR P PP P P+ +
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPE--P 180
Query: 880 GXPPXFLAGPXXPPTKR 930
PP P PP R
Sbjct: 181 RNPPRTPPSPIPPPPPR 197
>DQ178634-1|ABD75713.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>DQ178633-1|ABD75712.1| 470|Caenorhabditis elegans ceramide
glycosyl transferase protein.
Length = 470
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = -3
Query: 238 LAIAVSYSPMTTLIYSCSASTSSVLGASVALEASAHTARTKANKVSLILAQ 86
+A +S + +T++ + ++STSS++GA+ A A A + + + S +L +
Sbjct: 7 VATNLSTAANSTVLRTVASSTSSIIGAAAAAVAEAQPSASPSTSSSFLLLE 57
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +1
Query: 643 SSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774
SS+ + P PS P P P P P P P PP
Sbjct: 669 SSSEVPPAEPSAPEPKPAPKPDPKPDPKPDPKPDPVPAKPVSPP 712
>Z69384-6|CAA93414.3| 499|Caenorhabditis elegans Hypothetical
protein T11G6.4 protein.
Length = 499
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 540 TPVL-ENNRVYFKIMSTEDKQYLKLDNXKGS-SDDRIIYGDSTADTFKHH 683
TPVL + R K+ + EDK L D+ S S+D ++ D T KHH
Sbjct: 444 TPVLIKEKRKRHKLKAREDKALLNSDSDSNSDSEDDLLLNDQTTRR-KHH 492
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 652 VIAPLTPSNTTGTXXPXPHXP-----PXPPPXXTKXPPP 753
+I P+TP+ T P P P P P P T PPP
Sbjct: 1692 LIRPITPAQPPITQSPVPSEPVVVRTPSPVPQPTPPPPP 1730
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 631 VMTVSSTVIAPLTPS-NTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPPR 777
V+ + + P+TPS T + PP PPP P S PPR
Sbjct: 342 VLAKPTPMQTPMTPSFRGTNAAQSPANAPPRPPPPRPAAPSVESPIPPPR 391
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 5.3
Identities = 23/89 (25%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Frame = +1
Query: 667 TPSNTTGTXXPXPHXPPXP-PPXXTKXPPPCSSXXPPRXXXXXLXXPLXXKXWPPXPXXX 843
+P + P P PP P P ++ P P P P PP P
Sbjct: 194 SPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSD----PPGPPGP 249
Query: 844 XXPXGPTXKKFXGXPPXFLAGPXXPPTKR 930
P G P GP PPT+R
Sbjct: 250 PGPPTRRPPGPPGPPTRRPPGPPGPPTRR 278
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 670 PSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774
P + P PP PPP PPP PP
Sbjct: 118 PQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPP 152
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 29.1 bits (62), Expect = 5.3
Identities = 26/73 (35%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = -2
Query: 833 GLGGXIFXXRGXXXXXXXXRGGXXEEQGGGXXVXXGG-GXGGXWGXGXXVP--VVFEGVS 663
G GG RG RGG ++GGG GG G GG G P VV GV
Sbjct: 8 GGGGGFRGGRGGGGGGGF-RGGRGGDRGGGFRGGRGGFGGGGRGGYDQGPPEEVVLVGVF 66
Query: 662 GAITVDDTVITRT 624
DD V T
Sbjct: 67 SHQCQDDIVCNNT 79
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 278 DNLSLLFLQIFRAFGDSGLVFTNDDTHIQLLRQYVISSWCKCGVRSQRTHGEDEG 114
DN + + Q FR+ G S + + + ISSW +C + GEDEG
Sbjct: 795 DNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEG 849
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSS 762
P P PP PPP T P P S
Sbjct: 641 PPPPMPPSPPPELTTKPKPSES 662
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSS 762
P P PP PPP T P P S
Sbjct: 641 PPPPMPPSPPPELTTKPKPSES 662
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 7.1
Identities = 25/75 (33%), Positives = 27/75 (36%)
Frame = -2
Query: 920 GGXXGPARKXGGXPXNFLXVGPXGXXXXXGLGGXIFXXRGXXXXXXXXRGGXXEEQGGGX 741
GG + GG N G G G GG RG RGG +GGG
Sbjct: 60 GGSGWGGGRGGGWGNN----GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGG- 114
Query: 740 XVXXGGGXGGXWGXG 696
GGG GG G G
Sbjct: 115 ----GGGGGGRGGGG 125
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 7.1
Identities = 26/84 (30%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +1
Query: 493 SVTPKTKPARKSPGSLPPCWKTTEFTSRSCPPRTNST*SSITRKVLVMTVSST--VIAPL 666
S +P T P + S P K T+ S P T +T + T +T V P
Sbjct: 544 SASPTTTPTHTT-ASQPTTTKPV-VTTNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTKPT 601
Query: 667 TPSNTTGTXXPXPHXPPXPPPXXT 738
PS+TT T P P PP T
Sbjct: 602 VPSSTTQTAPPVT-TPTSQPPVTT 624
>AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical
protein Y106G6H.1 protein.
Length = 453
Score = 28.7 bits (61), Expect = 7.1
Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +1
Query: 499 TPKTKPARKSPGSLPPCWK--TTEFTSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTP 672
+PK + K PPC + T FT+ + P +T T T A T
Sbjct: 73 SPKLQDLIKIRDDQPPCPQPNATMFTTPTTPAAPTTTADPTT------VADDTTTAGATD 126
Query: 673 SNTTGTXXPXPHXPPXPPPXXTK 741
S+T+G PP PP K
Sbjct: 127 SSTSGASDAPSSTPPPPPKISDK 149
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSS 762
P P PP PPP T P P S
Sbjct: 641 PPPPMPPSPPPELTTKPKPSES 662
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 697 PXPHXPPXPPPXXTKXPPPCSS 762
P P PP PPP T P P S
Sbjct: 641 PPPPMPPSPPPELTTKPKPSES 662
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +2
Query: 758 PPXXHPXXXXPXFXHPLXXKXGPPXXXPXXPLXGPPXKNFXXXPXPFWPGH 910
PP HP F H L G P P PP N P P PG+
Sbjct: 666 PPVPHPPPMGFPFQHQLTQLPGQPRPAGLPP-GVPPMFNLNAPPPPGIPGY 715
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +1
Query: 655 IAPLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSSXXPP 774
IA L +N GT P P PP P P PP PP
Sbjct: 547 IAGLLAAN--GTNVPIPPPPPPPLPQNLSGAPPPPPPPPP 584
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 827 GGXIFXXRGXXXXXXXXRGGXXEEQGGGXXVXXGGGXGG 711
GG + G RGG GGG + GGG GG
Sbjct: 224 GGDRYGGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGGG 262
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 703 PHXPPXPPPXXTKXPPPCSSXXPP 774
P PP P P PPP S PP
Sbjct: 253 PPPPPCPMPIPCPPPPPACSCPPP 276
>Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical
protein F54B11.11 protein.
Length = 598
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 568 TSRSCPPRTNST*SSITRKVLVMTVSSTVIAPLTPSNTTGTXXPXPHXPP 717
TS + T++T + T+ ++ T ++T P+T + T P P PP
Sbjct: 480 TSSTTKTLTSTTTITTTKANILTTTATTTTPPVTSAPATTFITPVPFTPP 529
>Z22180-4|CAA80178.1| 312|Caenorhabditis elegans Hypothetical
protein K11H3.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 270 EVIKEAVKRLIENGKRNTMDFAYQLWTKDG 359
+V+K ++ L +NT+D A Q+W K+G
Sbjct: 242 DVVKTRMQGLEAKKYKNTLDCAMQIWKKEG 271
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +3
Query: 399 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 554
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 555 NNRVYFKIMSTEDK 596
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Frame = +3
Query: 399 VIFTEQTVKLIN-----KRDHHALKLIDQQNHNKIAFGDSK---DKTSKKVSWKFTPVLE 554
++ T++ +K++N +R H L L +KI F D D + + W +P LE
Sbjct: 911 IVQTDKKLKVVNVATELERVDHILPLRYATISHKIEFSDEIKFIDGSKTNLQWTLSPPLE 970
Query: 555 NNRVYFKIMSTEDK 596
V FK+ +K
Sbjct: 971 AGTVLFKVSIFREK 984
>U39854-2|AAA81077.2| 703|Caenorhabditis elegans Puf (pumilio/fbf)
domain-containingprotein 9 protein.
Length = 703
Score = 28.3 bits (60), Expect = 9.3
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 EQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLWTKDGKE 365
E+ Y ++GE E + KC +K++ G ++++IE + + F +TK+ +
Sbjct: 440 EEKYQHEILGEMEGQVLKC---VKDQNG---NHVIQKVIERVEPERLQFIIDAFTKNNSD 493
Query: 366 IV--KSYFPIQFRVI 404
V S P RVI
Sbjct: 494 NVYTLSVHPYGCRVI 508
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 661 PLTPSNTTGTXXPXPHXPPXPPPXXTKXPPPCSS 762
P TPS+ P PPP + PPP SS
Sbjct: 650 PQTPSSPLPRIRIVSPLEPDPPPIPRRRPPPASS 683
>L25599-3|ABN43087.1| 570|Caenorhabditis elegans Hypothetical
protein F54H12.8 protein.
Length = 570
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 634 MTVSSTVIAPLTPSNTTGTXXPXPHXPPXPPPXXTK-XPPPCSSXXP 771
+T SST P P+ T P+ PP P + PPP S P
Sbjct: 102 LTASSTTSDPSIPNPTRKRITRQPNYPPWQPHQPSNPNPPPFSMNVP 148
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 9.3
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +1
Query: 583 PPRTNST*SSITRKVLVMTVSSTVIAP---LTPS--NTTGTXXPXPHXPPXPPPXXTKXP 747
PP ++ TR+V V+ S T P +T TT T P PP P T+
Sbjct: 285 PPTQTPPTTTTTRRVTVVVTSPTTTTPRRTITTRIWTTTTTQAPPTEAPPTEAPPTTQTT 344
Query: 748 P 750
P
Sbjct: 345 P 345
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.3 bits (60), Expect = 9.3
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +1
Query: 724 PPXXTKXPPPCSSXXPPRXXXXXLXXP--LXXKXWPPXPXXXXXPXGPTXKKFXGXPPXF 897
PP PPPC PP P PP P P G PP F
Sbjct: 34 PPIVIAGPPPCFDCPPPAPIFVAPPPPPCFGPACPPPCFGPACVPLAPII--VNGPPPCF 91
Query: 898 LAGPXXPP 921
GP PP
Sbjct: 92 --GPACPP 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,920,331
Number of Sequences: 27780
Number of extensions: 446293
Number of successful extensions: 3210
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2631
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2699257404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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