Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_G11
(998 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 33 0.24
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 33 0.24
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 33 0.24
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.56
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 32 0.56
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 32 0.73
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.73
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 0.97
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 0.97
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 0.99
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 0.99
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.7
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 31 1.7
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 30 3.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 3.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 3.0
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 30 3.0
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 3.9
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 3.9
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 3.9
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 3.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.9
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical pr... 29 5.2
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 29 5.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 5.2
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 29 5.2
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 5.2
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.8
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 29 6.8
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.8
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 29 6.8
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 6.8
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 6.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 6.8
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 28 9.1
AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical... 28 9.1
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 9.1
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
G GRG G GRGG GG GGR RG
Sbjct: 683 GDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRG 717
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 961 GXGXGRGGXGGXXXGGRXXQSXGRG 887
G G GRGG GG GGR RG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRG 696
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
G GRG G GRGG GG GGR RG
Sbjct: 724 GDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRG 758
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 961 GXGXGRGGXGGXXXGGRXXQSXGRG 887
G G GRGG GG GGR RG
Sbjct: 713 GGGGGRGGYGGGDRGGRGGYGGDRG 737
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
G GRG G GRGG GG GGR RG
Sbjct: 683 GDRGGRGGYGGDRGGRGGYGGGDRGGRGGYGGDRG 717
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -2
Query: 961 GXGXGRGGXGGXXXGGRXXQSXGRG 887
G G GRGG GG GGR RG
Sbjct: 672 GGGGGRGGYGGGDRGGRGGYGGDRG 696
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/35 (48%), Positives = 17/35 (48%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
G G G G G GRGG GG GGR GRG
Sbjct: 96 GGGGGGGGRGGGGGGRGGGGGG-GGGRGGGGGGRG 129
Score = 32.3 bits (70), Expect = 0.56
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGG 914
G GRG G G GRGG GG GG
Sbjct: 106 GGGGGRGGGGGGGGGRGGGGGGRGGG 131
Score = 31.5 bits (68), Expect = 0.97
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -2
Query: 979 GRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
GRG G G GRGG GG GG GRG
Sbjct: 93 GRGGGGGGGGGRGGGGGGRGGG-GGGGGGRG 122
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
G G G G GRGG GG GGR GRG
Sbjct: 79 GNWGGNGGGGNGGGGRGGGGGG-GGGRGGGGGGRG 112
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
G G G G G G GG G GGR GRG
Sbjct: 102 GGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 32.3 bits (70), Expect = 0.56
Identities = 21/47 (44%), Positives = 22/47 (46%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRGXXPPAXAEXAXG 851
G GRG G G GRGG GG GGR + RG A E A G
Sbjct: 330 GGRGGRGGRGGRG-GRGGRGGR--GGRGGRGDRRGDKRSANDEGADG 373
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 894 PXDXXXLPPXXXPPXPPLPXPXPXXXPLP 980
P + +PP PP PP P P P P P
Sbjct: 342 PVEITEIPPIISPPAPPPPPPPPPPPPPP 370
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 902 LXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
L PP PP PP P P P PPP
Sbjct: 43 LPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 860 PFCXGWRXXSPXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P C P + P PP PPP P P PPP
Sbjct: 36 PMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 809 PXXCAPXIPTTLXVSXRPFCXGWRXXSPXXGLXXPPXXXXPPTXPPPXPXSPXXXP 976
P CAP L P C + P PP PP PPP P P P
Sbjct: 35 PPMCAPP---PLPCPPPPICPP-QFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXPXSPXXXPSXP 985
PP PP PPP P P P P
Sbjct: 58 PPPMCPPPPPPPPPPMCPPPPPPMP 82
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 915 PPXXXPPXPPLPXPXPXXXPLPXXXP 992
PP PP PP+ P P P P P
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICP 52
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P L PP PP PP P P+ PPP
Sbjct: 78 PPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 111
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 929 PPTXPPPXPXS-PXXXPSXPPP 991
PP PPP P S P P+ PPP
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPP 94
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P L PP PP PP P P+ PPP
Sbjct: 300 PPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 333
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 929 PPTXPPPXPXS-PXXXPSXPPP 991
PP PPP P S P P+ PPP
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPP 316
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P P S PPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 29.5 bits (63), Expect(2) = 0.99
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 929 PPTXPPPXPXS-PXXXPSXPPP 991
PP PPP P S P P+ PPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPP 176
Score = 20.6 bits (41), Expect(2) = 0.99
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXP 955
PP P PPP P
Sbjct: 114 PPTASSAPPVPPPAP 128
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P P S PPP
Sbjct: 4 PPPPPPPPPPPPPPAASAPPP 24
Score = 29.5 bits (63), Expect(2) = 0.99
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 929 PPTXPPPXPXS-PXXXPSXPPP 991
PP PPP P S P P+ PPP
Sbjct: 155 PPPPPPPPPVSVPSSKPTPPPP 176
Score = 20.6 bits (41), Expect(2) = 0.99
Identities = 7/15 (46%), Positives = 7/15 (46%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXP 955
PP P PPP P
Sbjct: 114 PPTASSAPPVPPPAP 128
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXSP 898
GGG G G G GGG GG GG +P
Sbjct: 81 GGGGCGGGGGGCGGGGGGCGGGGGCGGGCAP 111
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXSP 898
GGG G G G GGG GG GG P
Sbjct: 25 GGGGGGGCGGGCGGGGGCGGGGGCGGGCAPP 55
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXSP 898
GGG G G G GGG GG GG P
Sbjct: 82 GGGCGGGGGGCGGGGGGCGGGGGCGGGCAPP 112
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGG 88
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 146 GGGCGGGGGGCGGGGGGCGGGGGGCGG 172
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 157 GGGGGGCGGGGGGCGGGGGGGCGGGGG 183
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXSP 898
GGG G G GGG GG GG +P
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAP 54
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 31.1 bits (67), Expect = 1.3
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXSPXXGEXXLQPXQXGRXDTXNVVGIXGAQXX 811
GGG G G G GG GG G +P +P + G G GA
Sbjct: 89 GGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGK 148
Query: 810 GXA 802
G A
Sbjct: 149 GAA 151
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXPXSPXXXPSXPPP 991
PP PP PPP P P PPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 804 PXPXXVXPXFX--PHXXYPXAXSAXAGGXXPLPXDXXXLPPXXXPPXPPLPXPXPXXXPL 977
P P + P P P GG P P LPP P PP P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 978 PXXXP 992
P P
Sbjct: 773 PPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXPXSPXXXPSXPPP 991
PP PP PPP P P PPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 804 PXPXXVXPXFX--PHXXYPXAXSAXAGGXXPLPXDXXXLPPXXXPPXPPLPXPXPXXXPL 977
P P + P P P GG P P LPP P PP P P P
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 978 PXXXP 992
P P
Sbjct: 773 PPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXPXSPXXXPSXPPP 991
PP PP PPP P P PPP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.5 bits (63), Expect = 3.9
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 804 PXPXXVXPXFX--PHXXYPXAXSAXAGGXXPLPXDXXXLPPXXXPPXPPLPXPXPXXXPL 977
P P + P P P GG P P LPP P PP P P P
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPP-PPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 978 PXXXP 992
P P
Sbjct: 356 PPPPP 360
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 911 PPXXXXPPTX---PPPXPXSPXXXPSXPPP 991
PP PP+ PPP P +P P PPP
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPP 290
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 795 PXXPXPXXVXPXFXPHXXYPXAXSAXAGGXXPLPXDXXXLPPXXXPPXPPLPXP 956
P P P P P P SA G P P PP PP P P
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 878 RXXSPXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
R S G+ PP PP+ PP P P PPP
Sbjct: 354 RYPSAGPGMYPPP----PPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 911 PPXXXXPPTX---PPPXPXSPXXXPSXPPP 991
PP PP+ PPP P +P P PPP
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPP 300
Score = 28.3 bits (60), Expect = 9.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 795 PXXPXPXXVXPXFXPHXXYPXAXSAXAGGXXPLPXDXXXLPPXXXPPXPPLPXP 956
P P P P P P SA G P P PP PP P P
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 878 RXXSPXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
R S G+ PP PP+ PP P P PPP
Sbjct: 364 RYPSAGPGMYPPP----PPSRPPAPPSGHGMIPPPPPP 397
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 991 GXXXGRGXXXGX--GXGRGGXGGXXXGGRXXQSXGRG 887
G GRG G G GRGG GG G R GRG
Sbjct: 162 GDRGGRGSDRGGRGGFGRGGGGGFRGGDRGGFGGGRG 198
Score = 28.3 bits (60), Expect = 9.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXG 893
G GRG G G RGG GG GGR G
Sbjct: 24 GFRGGRGGDRGGGF-RGGRGGFGGGGRGGYDQG 55
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXPXSPXXXPSXPPP 991
PP PP PP P SP P PP
Sbjct: 150 PPPRSPPPRRPPMTPPSPQRRPPRTPP 176
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +2
Query: 818 CAPXIPTTLXVSXRPFCXGWRXXSPXXGLXX-PPXXXXPPTXPPPXPXSPXXXPSXPPP 991
C P P V +P G G+ PP PT PPP P P P P
Sbjct: 104 CLPGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGP 162
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P + P P PPP P P P PPP
Sbjct: 118 PQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPP 151
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQSXGRGXXPPAXAEXAXGYXQCGXNXGXTXX 812
G G G G G GRG GG GGR GRG + G N G
Sbjct: 70 GNNGGGGNWGGNGGGRGDWGGNGGGGRG--GGGRGDWGGNNNGGGGNWGGGGNNDGGWGG 127
Query: 811 GXGXXG 794
G G
Sbjct: 128 NNGGGG 133
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +2
Query: 818 CAPXIPTTLXVSXRPFCXGWRXXSPXXGLXX-PPXXXXPPTXPPPXPXSPXXXPSXPPP 991
C P P V +P G G+ PP PT PPP P P P P
Sbjct: 104 CLPGPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGP 162
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXS 901
GGG G G G GGG GG GG S
Sbjct: 787 GGGGGGGNGGSGGGGGGGGGGSGGSGGGGS 816
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXSPXXG 889
GGG G G G GGG GG G + G
Sbjct: 790 GGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGG 823
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXX--GGRXXQSXGRG 887
G G G G GRGG GG GGR GRG
Sbjct: 87 GFGDNGGLRGGNGGGRGGNGGFDDNGGGRGGNGGGRG 123
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXX--GGRXXQSXGRG 887
G G G G GRGG GG GGR GRG
Sbjct: 107 GFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRG 143
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P L PP PP+ PP P S P PPP
Sbjct: 122 PPMSLLGPPPFSVPPSVPP--PTSSAAAPIVPPP 153
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P L PP PP+ PP P S P PPP
Sbjct: 145 PPMSLLGPPPFSVPPSVPP--PTSSAAAPIVPPP 176
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P L PP PP+ PP P S P PPP
Sbjct: 395 PPMSLLGPPPFSVPPSVPP--PTSSAAAPIVPPP 426
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P S P PPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPP 1359
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P G PP PP P P P S PPP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P G PP + PPP SP P+ PP
Sbjct: 248 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 281
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P G PP PP P P P S PPP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P G PP + PPP SP P+ PP
Sbjct: 269 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 302
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P G PP PP P P P S PPP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPPP 991
P G PP + PPP SP P+ PP
Sbjct: 254 PLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP 287
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 915 PPXXXPPXPPLPXPXPXXXPLPXXXPXK 998
P PP PP P P P P P P K
Sbjct: 634 PLNPQPPPPPSPSPEPEPEPKPPVTPPK 661
>Z81525-8|CAB04257.1| 208|Caenorhabditis elegans Hypothetical
protein F33A8.3 protein.
Length = 208
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXGRGGXGGXXXGGRXXQS 899
G GRG G GRGG G GG+ QS
Sbjct: 176 GERGGRGGGRRGGRGRGGRGRGGRGGQGGQS 206
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.1 bits (62), Expect = 5.2
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGGXXSPXXG 889
GGG G G G GGG G G SP G
Sbjct: 486 GGGFGGGGGGFGGGGGGFGSGSPFGGAAPSPPSG 519
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 890 PXXGLXXPPXXXXPPTXPPPXPXSPXXXPSXPP 988
P PP PP PPP P P P P
Sbjct: 59 PCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRP 91
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +3
Query: 915 PPXXXP-PXPPLPXPXPXXXPLPXXXP 992
PP P P PP+P P P P P P
Sbjct: 42 PPQYAPLPPPPMPAPAPAYNPYPCANP 68
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 101 GGGDFGGGMGGGGYGGGGYGGGGDGGG 127
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 202 GGGYGGGGMGGGGYGGGGDGGYGPSGG 228
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/72 (33%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = -2
Query: 991 GXXXGRGXXXGXGXG-RGGXGGXXXGGRXXQSXGRGXXPPAXAEXAXGYXQCGXNXGXTX 815
G G G G G G RGG GG GGR G G GY G G
Sbjct: 13 GGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGG----GGGYGGGGYGG-GGRGGGRG 67
Query: 814 XGXGXXGXXLRE 779
G G LR+
Sbjct: 68 GSNGSAGGRLRD 79
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 113 GGGCGGGGGGGCGGGGGGGGGGYASGG 139
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 914 PXXXXPPTXPPPXPXSPXXXPSXPPP 991
P P PPP P P P PPP
Sbjct: 243 PPPPSPVCMPPPPPPCPMPIPCPPPP 268
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -2
Query: 979 GRGXXXGXGXGRGGXGGXXXGGRXXQSXGRG 887
G+G G G GRGG G GG Q +G
Sbjct: 189 GQGGNQGGGGGRGGNQGGEQGGWGGQGGSQG 219
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical
protein R10E12.1d protein.
Length = 498
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P +P PPP
Sbjct: 370 PPRPPPPRPAAPSVESPIPPP 390
>Z29561-3|CAD54153.1| 846|Caenorhabditis elegans Hypothetical
protein R10E12.1c protein.
Length = 846
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P +P PPP
Sbjct: 754 PPRPPPPRPAAPSVESPIPPP 774
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical
protein R10E12.1b protein.
Length = 882
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P +P PPP
Sbjct: 754 PPRPPPPRPAAPSVESPIPPP 774
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical
protein R10E12.1a protein.
Length = 861
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P +P PPP
Sbjct: 733 PPRPPPPRPAAPSVESPIPPP 753
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGG 133
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 80 GGGCGGGGGGCGGGGGGCGGGGGCGGG 106
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 100 GGGCGGGGGGCGGGGGGCGGGGGGCGG 126
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 107 GGGCGGGGGGCGGGGGGCGGGGGGCGG 133
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 929 PPTXPPPXPXSPXXXPSXPPP 991
PP PPP P +P PPP
Sbjct: 733 PPRPPPPRPAAPSVESPIPPP 753
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 21 GGGFGGGNNGGSGFGGGKNGGTGFGGG 47
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG +G GG
Sbjct: 173 GGGYGGGYGGGYGYGGGLIGSLVNIGG 199
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 21 GGGFGGGNNGGSGFGGGKNGGTGFGGG 47
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 9/65 (13%)
Frame = +2
Query: 824 PXIPTTLXVSXRPFCXGWRXX--------SPXXGLXXPPXXXXPPTX-PPPXPXSPXXXP 976
P P T +P C G R G+ PP P T PPP P +P P
Sbjct: 88 PCCPATPNCCPKPCCRGRRPEYEEYEDEEGNPGGVPAPPNP--PRTCCPPPTPAAPPPPP 145
Query: 977 SXPPP 991
PPP
Sbjct: 146 PPPPP 150
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GGG GG GG
Sbjct: 21 GGGFGGGNNGGSGFGGGKNGGTGFGGG 47
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 888 PLPXDXXXLPPXXXPPXPPLPXPXPXXXP 974
PLP + PP PP P L P P P
Sbjct: 567 PLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 912 LPPXXXPPXPPLPXPXPXXXPLPXXXP 992
+PP PP P P P P P P P
Sbjct: 96 VPPPPPPPTQPEPEPEPRPEPQPEPQP 122
>AL132949-22|CAB70112.2| 603|Caenorhabditis elegans Hypothetical
protein Y53F4B.25 protein.
Length = 603
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 911 PPXXXXPPTXPPPXPXSPXXXPSXP 985
PP PPT PP P P P P
Sbjct: 449 PPRLPQPPTAPPTVPPPPNQAPIVP 473
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.3 bits (60), Expect = 9.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 990 GGGXEGXXXGXXGXGGGXVGGXXXXGG 910
GGG G G G GG VGG GG
Sbjct: 99 GGGGGGYGGGHGGGHGGAVGGGYGGGG 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,267,281
Number of Sequences: 27780
Number of extensions: 116445
Number of successful extensions: 2592
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1834
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2615559500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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