Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G03
         (942 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S56138-1|AAA14245.1|  748|Homo sapiens choline acetyltransferase...    31   8.0  
S45018-1|AAB23557.2|  559|Homo sapiens choline acetyltransferase...    31   8.0  
BC130617-1|AAI30618.1|  630|Homo sapiens CHAT protein protein.         31   8.0  
BC130615-1|AAI30616.1|  630|Homo sapiens CHAT protein protein.         31   8.0  
AF305909-1|AAK08955.1|  630|Homo sapiens choline acetyltransfera...    31   8.0  
AF305908-1|AAK08954.1|  666|Homo sapiens choline acetyltransfera...    31   8.0  
AF305907-1|AAK08953.1|  748|Homo sapiens choline acetyltransfera...    31   8.0  
AF305906-3|AAK08952.1|  630|Homo sapiens choline acetyltransfera...    31   8.0  
AF305906-2|AAK08951.1|  666|Homo sapiens choline acetyltransfera...    31   8.0  
AF305906-1|AAK08950.1|  748|Homo sapiens choline acetyltransfera...    31   8.0  

>S56138-1|AAA14245.1|  748|Homo sapiens choline acetyltransferase
           protein.
          Length = 748

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381


>S45018-1|AAB23557.2|  559|Homo sapiens choline acetyltransferase
           protein.
          Length = 559

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 242 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271


>BC130617-1|AAI30618.1|  630|Homo sapiens CHAT protein protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263


>BC130615-1|AAI30616.1|  630|Homo sapiens CHAT protein protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263


>AF305909-1|AAK08955.1|  630|Homo sapiens choline acetyltransferase
           isoform R protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263


>AF305908-1|AAK08954.1|  666|Homo sapiens choline acetyltransferase
           isoform S protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299


>AF305907-1|AAK08953.1|  748|Homo sapiens choline acetyltransferase
           isoform M protein.
          Length = 748

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381


>AF305906-3|AAK08952.1|  630|Homo sapiens choline acetyltransferase
           isoform R protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263


>AF305906-2|AAK08951.1|  666|Homo sapiens choline acetyltransferase
           isoform S protein.
          Length = 666

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299


>AF305906-1|AAK08950.1|  748|Homo sapiens choline acetyltransferase
           isoform M protein.
          Length = 748

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 205 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 294
           L+TS G ++W EAR++ + D T  DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,253,539
Number of Sequences: 237096
Number of extensions: 2611084
Number of successful extensions: 7080
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6809
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12381054106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)