Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_G02
(919 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 40 0.002
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 40 0.002
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 40 0.002
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 40 0.002
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 31 0.041
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.061
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 0.096
SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2) 33 0.24
SB_1509| Best HMM Match : SRR (HMM E-Value=0.22) 33 0.24
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 33 0.32
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 33 0.43
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.75
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.75
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 32 0.75
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 0.99
SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05) 31 0.99
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 1.3
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 31 1.7
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 30 2.3
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 30 2.3
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 4.0
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 5.3
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 29 5.3
SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 28 9.2
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 28 9.2
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 28 9.2
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/84 (33%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Frame = -3
Query: 908 PXGGX---PPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPP 738
P GG PPPP GG GG P PP G P P PP
Sbjct: 914 PPGGSVPPPPPPPGGNAPLPPPPPGG----SAPSQPPPPGGNAPPPPPPPG---GSAPPP 966
Query: 737 XXGGXPXXPPXGXXXXXPPXPXXP 666
G P PP G PP P P
Sbjct: 967 GGGAPPLPPPPGGSAPPPPPPPPP 990
Score = 38.3 bits (85), Expect = 0.009
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = -1
Query: 892 PPPXXXGXXXXXXXGGGGXXGXXPPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXP 713
PPP G GG PPP P P P PP G P
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPP--PGGNAPPPPPPPGGS-----APPPGGGAPPLP 974
Query: 712 PPXGXXXPXPPXPXXP 665
PP G P PP P P
Sbjct: 975 PPPGGSAPPPPPPPPP 990
Score = 35.1 bits (77), Expect = 0.080
Identities = 26/79 (32%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Frame = -3
Query: 908 PXGGX---PPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPP 738
P GG PPPP GG GG P PP G P G P PP
Sbjct: 925 PPGGNAPLPPPPPGGSAPSQPPPPGGNA----PPPPPPPGGSAPPPGGGA-----PPLPP 975
Query: 737 XXGGXPXXPPXGXXXXXPP 681
GG PP PP
Sbjct: 976 PPGGSAPPPPPPPPPPPPP 994
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +1
Query: 748 PGXXXCXXXGPXXGXXPXXGGXXXGXFXXGPPPPXXXXXXXXPPXGGGGXPPXG 909
PG P G P G PPPP PP GG PP G
Sbjct: 915 PGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGG 968
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 748 PGXXXCXXXGPXXGXXPXXGGXXXGXFXXGPPPPXXXXXXXXPPXGGGGXPP 903
PG P G P G PPPP PP GG PP
Sbjct: 904 PGGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPP 955
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/88 (28%), Positives = 26/88 (29%)
Frame = +2
Query: 587 PPPPXGGGXXFLGAPXXSXXXKPXXPRXXXXGGXGXPXPPXGGXXGXPXXXGXPXGKXFV 766
PPPP G P S +P P GG P PP G P G P
Sbjct: 923 PPPPGGNAPLPPPPPGGSAPSQPPPP-----GGNAPPPPPPPGGSAPPPGGGAPP----- 972
Query: 767 XXGAXXXXXXPXXGXXXXGXXPXXPPPP 850
P G P PPPP
Sbjct: 973 -------LPPPPGGSAPPPPPPPPPPPP 993
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -3
Query: 821 PXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXPXXPGXXXVXXX 642
P PP P P P PP G P PP PP P G
Sbjct: 910 PSASPPGGSVPPPPPPPGGNAPLP-PPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGG 968
Query: 641 GXXXGPP 621
G PP
Sbjct: 969 GAPPLPP 975
Score = 29.9 bits (64), Expect = 3.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 565 PPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPP 395
PPP P P PP G P PPP PP G P PP
Sbjct: 922 PPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSA---PPPGGGAPPLPP 975
Score = 29.5 bits (63), Expect = 4.0
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 2/71 (2%)
Frame = +3
Query: 645 PXNPXXPGXXGXGGXGXXXPXGGGXXVPPXXGGX--PXXKXLXXXGPXXGXXTXXXGXXG 818
P P PG G P G PP GG P P G
Sbjct: 920 PPPPPPPG--GNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPP 977
Query: 819 GGFXPXXPPPP 851
GG P PPPP
Sbjct: 978 GGSAPPPPPPP 988
Score = 29.1 bits (62), Expect(2) = 0.018
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = -1
Query: 832 GXXPPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXP 674
G P P P P PP PPP G P PP P
Sbjct: 906 GSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPP 958
Score = 28.7 bits (61), Expect(2) = 0.15
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 753 PXGXPXXXGXPXXPPXGGXGXPXPPXXXXRGXXGXXXXXXXGAPKXXXPPPXGG 592
P P P PP G P PP G G PPP GG
Sbjct: 910 PSASPPGGSVPPPPPPPGGNAPLPPPPP--GGSAPSQPPPPGGNAPPPPPPPGG 961
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -1
Query: 562 PPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPP 395
PP PP + P PP P PPP PP P PP
Sbjct: 933 PPPPPGGSAPSQPPPPGGNA--PPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPP 986
Score = 27.1 bits (57), Expect(2) = 0.018
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = -1
Query: 562 PPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPP 455
PP PP P PP G P PPP
Sbjct: 953 PPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPP 988
Score = 24.2 bits (50), Expect(2) = 0.15
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 3/36 (8%)
Frame = -2
Query: 495 PPXXGX---PKTXXPPXXPXKXXFSPPFXXGXPPPP 397
PP G P PP P +PP PPPP
Sbjct: 957 PPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPP 992
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 41.5 bits (93), Expect = 0.001
Identities = 32/105 (30%), Positives = 33/105 (31%)
Frame = -2
Query: 903 GGXPPPPXGXXXXXXXXXGGGGXXGKXPXXXXPXXGXXXXXXAPXXTXXXPXGXPXXXGX 724
GG PPPP G G G G P G A P G G
Sbjct: 511 GGGPPPP-GAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGP 569
Query: 723 PXXPPXGGXGXPXPPXXXXRGXXGXXXXXXXGAPKXXXPPPXGGG 589
P PP G G P PP G GA + PPP G G
Sbjct: 570 P--PPGAGQGGPPPPGAGQEG------PPPPGAGQGGGPPPPGAG 606
Score = 40.7 bits (91), Expect = 0.002
Identities = 29/98 (29%), Positives = 29/98 (29%), Gaps = 2/98 (2%)
Frame = +1
Query: 622 GGPXXXPXXXTXXXPGXXGXGGXXXXXPXGGXXGXPPXXGGXPGXXXCXXXGPXXGXXPX 801
GGP P G P G G PP G G P G
Sbjct: 512 GGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQ-----PPPGAGQG 566
Query: 802 XGGXXXGXFXXGPPPPXXXXXXXXPPXG--GGGXPPXG 909
G G GPPPP PP GGG PP G
Sbjct: 567 GGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPG 604
Score = 38.3 bits (85), Expect = 0.009
Identities = 34/113 (30%), Positives = 34/113 (30%), Gaps = 7/113 (6%)
Frame = +2
Query: 587 PPPPXGGGXXFLGAPXXSXXXKPXXPRXXXXGGXGXPXPPXGGXXGXPXXXGXPXGKXFV 766
PPP G G G P P G G P PP G G P G G
Sbjct: 493 PPPGAGQGG---GPPPPGAGQGGGPPPPGAGQGWGQP-PPGAGQGGGPPPPGAGQGGGPP 548
Query: 767 XXGAXXXXXXPXXGXXXXGXXP------XXPPPPXXXXXXXXXPXGG-GGXPP 904
GA P G G P PPPP P G GG PP
Sbjct: 549 PPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPP 601
Score = 38.3 bits (85), Expect = 0.009
Identities = 24/82 (29%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Frame = -1
Query: 901 GXXPPPXXXGXXXXXXXGGGGXXGXXPPPXX------PXXXVXXPXXGPXXXKXFXXGXP 740
G PPP G G G G PPP P P G P
Sbjct: 511 GGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPP 570
Query: 739 PXXGGTXXPPPXGXXXPXPPXP 674
P G PPP G PP P
Sbjct: 571 PPGAGQGGPPPPGAGQEGPPPP 592
Score = 36.7 bits (81), Expect = 0.026
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = -3
Query: 902 GGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGX 723
GG PPPP G GG P P G GP G PP G
Sbjct: 533 GGGPPPPGAGQG------GGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQ 586
Query: 722 PXXPPXGXXXXXPPXPXXPG 663
PP G P P G
Sbjct: 587 EGPPPPGAGQGGGPPPPGAG 606
Score = 35.5 bits (78), Expect = 0.061
Identities = 25/94 (26%), Positives = 26/94 (27%)
Frame = -3
Query: 902 GGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGX 723
GG PPPP G G G + P G P P Q P P G
Sbjct: 500 GGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPP---PGAGQGGGPPPPGAGQGW 556
Query: 722 PXXPPXGXXXXXPPXPXXPGXXXVXXXGXXXGPP 621
PP PP P GPP
Sbjct: 557 GQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPP 590
Score = 35.1 bits (77), Expect = 0.080
Identities = 27/91 (29%), Positives = 27/91 (29%), Gaps = 1/91 (1%)
Frame = +1
Query: 622 GGPXXXPXXXTXXXPGXXGXG-GXXXXXPXGGXXGXPPXXGGXPGXXXCXXXGPXXGXXP 798
GG P P G G G P G G PP G G G P
Sbjct: 533 GGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPP--PPGAGQEGPP 590
Query: 799 XXGGXXXGXFXXGPPPPXXXXXXXXPPXGGG 891
G G GPPPP PP G G
Sbjct: 591 PPGAGQGG----GPPPPGAGQGWGLPPPGSG 617
Score = 34.7 bits (76), Expect = 0.11
Identities = 24/85 (28%), Positives = 24/85 (28%), Gaps = 5/85 (5%)
Frame = -1
Query: 901 GXXPPPXXXGXXXXXXXGGGGXXGXXPPPXXPXXXVXXPXX-----GPXXXKXFXXGXPP 737
G PP G G G G PPP P GP G PP
Sbjct: 522 GWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPP 581
Query: 736 XXGGTXXPPPXGXXXPXPPXPXXPG 662
G PPP G P P G
Sbjct: 582 PGAGQEGPPPPGAGQGGGPPPPGAG 606
Score = 34.7 bits (76), Expect = 0.11
Identities = 25/77 (32%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = -3
Query: 902 GGXPPPPXGGXXXXXXXXG---GGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXX 732
GG PPPP G G GGGP PP G P Q P
Sbjct: 544 GGGPPPPGAGQGWGQPPPGAGQGGGPP-------PPGAGQGGPPPPGAGQEGPPPPGAGQ 596
Query: 731 GGXPXXPPXGXXXXXPP 681
GG P P G PP
Sbjct: 597 GGGPPPPGAGQGWGLPP 613
Score = 30.7 bits (66), Expect = 1.7
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 8/84 (9%)
Frame = -1
Query: 901 GXXPPPXXXGXXXXXXXGGGGXXGXXPPPXXPXXXVXXP-----XXGPXXXKXFXXGXPP 737
G PP G G G G PPP P GP G PP
Sbjct: 489 GWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGGPP 548
Query: 736 XXG---GTXXPPPXGXXXPXPPXP 674
G G PPP PP P
Sbjct: 549 PPGAGQGWGQPPPGAGQGGGPPPP 572
Score = 29.9 bits (64), Expect = 3.0
Identities = 33/124 (26%), Positives = 37/124 (29%), Gaps = 1/124 (0%)
Frame = -1
Query: 742 PPXXGGTXXPPPXGXXXPXPPXPXXPGXXGFXGXGXXRXXXXXXXXXXXXXXGFXXXEXP 563
PP G PPP G P P PG G G + G P
Sbjct: 494 PPGAGQGGGPPPPGAGQGGGPPP--PG----AGQGWGQPPPGAGQGGGPPPPGAGQGGGP 547
Query: 562 PPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPP-XXXGXXPXPPXFF 386
PP P + P PP G + PPP + PP G P PP
Sbjct: 548 PP-PGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPPPPGAG 606
Query: 385 XFWG 374
WG
Sbjct: 607 QGWG 610
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/185 (24%), Positives = 48/185 (25%), Gaps = 14/185 (7%)
Frame = -3
Query: 908 PXGGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXG 729
P G PPPP G G P PP G P G P PP
Sbjct: 142 PPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSR 201
Query: 728 GXPXXPPXGXXXXXPPXPXXPGXXXVXXXGXXXG-------PPKXXXXXXXXXXGFFXXG 570
PP PP P G G PP G G
Sbjct: 202 HGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGG 261
Query: 569 KXPPXPPXXXXKKKXXXXXXXXFFSPPXXGP-------QKPXAPPXXPKXPFFPPXFXXG 411
+ PP K+ PP GP Q P PP + P PP
Sbjct: 262 EPPPPKNAPPPPKRGSSNPP----PPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNAT 317
Query: 410 XPXPP 396
P PP
Sbjct: 318 PPPPP 322
Score = 34.7 bits (76), Expect = 0.11
Identities = 40/176 (22%), Positives = 42/176 (23%), Gaps = 10/176 (5%)
Frame = -1
Query: 892 PPPXXXGXXXXXXXGGGGXXGXXPPPXXPXXXVXXPXXG-----PXXXKXFXXGXPPXXG 728
PP G G PPP + P G P G PP
Sbjct: 208 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPK 267
Query: 727 GTXXPPPXGXXXPXPPXPXXPGXXGFXGXGXXRXXXXXXXXXXXXXXGFXXXEXPPPXPP 548
PP G P PP P F G PPP PP
Sbjct: 268 NAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPP----PLNATPPPPPP 323
Query: 547 XXXXKKKXPXXXXXXFFPPXXGXPKNP-----XPPPFXXKXXFFPPXXXGXXPXPP 395
P PP K P PPP + P G P PP
Sbjct: 324 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRA---PQPLGGPPPPPP 376
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 709 GGXXGXPPXXGGXPGXXXCXXXGPXXGXXPXXGGXXXGXFXXGPPPPXXXXXXXXPPXGG 888
GG P G P P G P G PPP PP
Sbjct: 153 GGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERS 212
Query: 889 GGXPP 903
G PP
Sbjct: 213 SGPPP 217
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 40.3 bits (90), Expect = 0.002
Identities = 45/185 (24%), Positives = 48/185 (25%), Gaps = 14/185 (7%)
Frame = -3
Query: 908 PXGGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXG 729
P G PPPP G G P PP G P G P PP
Sbjct: 54 PPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSR 113
Query: 728 GXPXXPPXGXXXXXPPXPXXPGXXXVXXXGXXXG-------PPKXXXXXXXXXXGFFXXG 570
PP PP P G G PP G G
Sbjct: 114 HGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGG 173
Query: 569 KXPPXPPXXXXKKKXXXXXXXXFFSPPXXGP-------QKPXAPPXXPKXPFFPPXFXXG 411
+ PP K+ PP GP Q P PP + P PP
Sbjct: 174 EPPPPKNAPPPPKRGSSNPP----PPPTRGPPSNSFTTQGPPLPPSRDQAPAPPPPLNAT 229
Query: 410 XPXPP 396
P PP
Sbjct: 230 PPPPP 234
Score = 34.7 bits (76), Expect = 0.11
Identities = 40/176 (22%), Positives = 42/176 (23%), Gaps = 10/176 (5%)
Frame = -1
Query: 892 PPPXXXGXXXXXXXGGGGXXGXXPPPXXPXXXVXXPXXG-----PXXXKXFXXGXPPXXG 728
PP G G PPP + P G P G PP
Sbjct: 120 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPPPPK 179
Query: 727 GTXXPPPXGXXXPXPPXPXXPGXXGFXGXGXXRXXXXXXXXXXXXXXGFXXXEXPPPXPP 548
PP G P PP P F G PPP PP
Sbjct: 180 NAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPP----PLNATPPPPPP 235
Query: 547 XXXXKKKXPXXXXXXFFPPXXGXPKNP-----XPPPFXXKXXFFPPXXXGXXPXPP 395
P PP K P PPP + P G P PP
Sbjct: 236 SRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRA---PQPLGGPPPPPP 288
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 709 GGXXGXPPXXGGXPGXXXCXXXGPXXGXXPXXGGXXXGXFXXGPPPPXXXXXXXXPPXGG 888
GG P G P P G P G PPP PP
Sbjct: 65 GGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERS 124
Query: 889 GGXPP 903
G PP
Sbjct: 125 SGPPP 129
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 40.3 bits (90), Expect = 0.002
Identities = 28/82 (34%), Positives = 28/82 (34%)
Frame = -3
Query: 908 PXGGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXG 729
P G PPPP G GG P P PP G P P G PP
Sbjct: 341 PSRGAPPPPSMGMAPPPV--GGAAPPPPPP---PPVGGPPPPPPPIE------GRPPSSL 389
Query: 728 GXPXXPPXGXXXXXPPXPXXPG 663
G P PP PP P PG
Sbjct: 390 GNPPPPPPPGRGAPPPGPMIPG 411
Score = 38.3 bits (85), Expect = 0.009
Identities = 26/82 (31%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Frame = -1
Query: 892 PPPXXXGXXXXXXXGGGGXX--GXXPPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTX 719
PPP G G G PPP P P GP G PP G
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPP-----PVGGPPPPPPPIEGRPPSSLGNP 392
Query: 718 XPPPXGXXXPXPPXPXXPGXXG 653
PPP PP P PG G
Sbjct: 393 PPPPPPGRGAPPPGPMIPGRAG 414
Score = 35.5 bits (78), Expect = 0.061
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Frame = -1
Query: 901 GXXPPPXXXGXXXXXXXGGGGXXGXXPPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGT 722
G PPP G G PPP P G PP G
Sbjct: 303 GAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAA 362
Query: 721 -XXPPPXGXXXPXPPXPXXPG 662
PPP P PP P G
Sbjct: 363 PPPPPPPPVGGPPPPPPPIEG 383
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 495 PPXXGXPKTXXPPXXPXKXXFSPPFXXGXPPPP 397
PP P PP P PP G PPPP
Sbjct: 363 PPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPP 395
Score = 28.7 bits (61), Expect = 7.0
Identities = 32/133 (24%), Positives = 34/133 (25%)
Frame = -3
Query: 836 PXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXPXXPGXX 657
P + PP G P P P P G P PP PP P G
Sbjct: 290 PPSRGAAPPPPSRGAPPP--PPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSR-GAP 346
Query: 656 XVXXXGXXXGPPKXXXXXXXXXXGFFXXGKXPPXPPXXXXKKKXXXXXXXXFFSPPXXGP 477
G PP G PP PP +PP P
Sbjct: 347 PPPSMG--MAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLG-------NPPPPPP 397
Query: 476 QKPXAPPXXPKXP 438
APP P P
Sbjct: 398 PGRGAPPPGPMIP 410
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/86 (34%), Positives = 30/86 (34%), Gaps = 5/86 (5%)
Frame = -3
Query: 908 PXGGXPPPPXGGXXXXXXXX--GGGGPXXKXPXXX---PPXXGXXPXXGPXXXQXFXPGX 744
P GG PP GG GGG P P PP G P G PG
Sbjct: 192 PPGGYQQPPPGGYAPPPYVPQEGGGIPPQNHPLTNYPAPPPQGYAPPPGGY------PGA 245
Query: 743 PPXXGGXPXXPPXGXXXXXPPXPXXP 666
PP GG P PP G PP P
Sbjct: 246 PPA-GGYPGAPPPGGYPGGPPPANYP 270
Score = 33.9 bits (74), Expect = 0.19
Identities = 26/82 (31%), Positives = 26/82 (31%), Gaps = 2/82 (2%)
Frame = -3
Query: 902 GGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXP--GXPPXXG 729
GG PPP G GG P P G P P P G P G
Sbjct: 187 GGYYPPPGG---YQQPPPGGYAPP---PYVPQEGGGIPPQNHPLTNYPAPPPQGYAPPPG 240
Query: 728 GXPXXPPXGXXXXXPPXPXXPG 663
G P PP G PP PG
Sbjct: 241 GYPGAPPAGGYPGAPPPGGYPG 262
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 31.1 bits (67), Expect(2) = 0.041
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -1
Query: 565 PPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXP 404
PPP PP + P PP K P PPP PP G P
Sbjct: 216 PPPPPPPSPSPPRPPPPPPPS--PPRPLAAKLPEPPPIPNMPPTLPPPTLGYLP 267
Score = 23.8 bits (49), Expect(2) = 0.041
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -1
Query: 724 TXXPPPXGXXXPXPPXPXXP 665
T PPP P PP P P
Sbjct: 202 TQPPPPPPRPPPSPPPPPPP 221
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 35.5 bits (78), Expect = 0.061
Identities = 29/119 (24%), Positives = 32/119 (26%)
Frame = -3
Query: 752 PGXPPXXGGXPXXPPXGXXXXXPPXPXXPGXXXVXXXGXXXGPPKXXXXXXXXXXGFFXX 573
P PP P PP PP P P PP +
Sbjct: 93 PYPPPPYPPYPPPPPY-PPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPY-PP 150
Query: 572 GKXPPXPPXXXXKKKXXXXXXXXFFSPPXXGPQKPXAPPXXPKXPFFPPXFXXGXPXPP 396
PP PP + PP P P PP P P +PP P PP
Sbjct: 151 PPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPP--PPNPPYPPPPNAPNPPPP 207
Score = 33.1 bits (72), Expect = 0.32
Identities = 31/141 (21%), Positives = 35/141 (24%), Gaps = 3/141 (2%)
Frame = -3
Query: 809 PPXXGXXPXXGPXXXQXFXPGXP-PXXGGXPXXPPXGXXXXXPPXPXXPGXXXVXXXGXX 633
P P P + P P P P PP PP P P
Sbjct: 85 PTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYP-PS 143
Query: 632 XGPPKXXXXXXXXXXGFFXXGKXPPXPPXXXXKKKXXXXXXXXFFSPPXXG-PQKPXAP- 459
P + PP P + PP P P AP
Sbjct: 144 PNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPN 203
Query: 458 PXXPKXPFFPPXFXXGXPXPP 396
P P P+ PP P PP
Sbjct: 204 PPPPNPPYPPPPNAPNPPYPP 224
Score = 30.7 bits (66), Expect = 1.7
Identities = 29/138 (21%), Positives = 31/138 (22%), Gaps = 5/138 (3%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGX-----XXPXPPXPXXPGX 659
P P P P P PP PPP P PP P P
Sbjct: 98 PYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYP 157
Query: 658 XGFXGXGXXRXXXXXXXXXXXXXXGFXXXEXPPPXPPXXXXKKKXPXXXXXXFFPPXXGX 479
PPP PP +PP
Sbjct: 158 PPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNA 217
Query: 478 PKNPXPPPFXXKXXFFPP 425
P P PPP +PP
Sbjct: 218 PNPPYPPPPNAPNPPYPP 235
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = -1
Query: 565 PPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPP 395
PP P P + PP P NP PP +PP P PP
Sbjct: 135 PPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPP 191
Score = 29.9 bits (64), Expect = 3.0
Identities = 34/153 (22%), Positives = 37/153 (24%), Gaps = 2/153 (1%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPX--PPXPXXPGXXGF 650
PPP P P P + PP PPP P PP P P
Sbjct: 118 PPPNAPYPPPPNPPYPPPPNAPY----PPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAP 173
Query: 649 XGXGXXRXXXXXXXXXXXXXXGFXXXEXPPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKN 470
P P PP P +PP P
Sbjct: 174 YPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPP--PPNAPNPPYPPPPNAPNP 231
Query: 469 PXPPPFXXKXXFFPPXXXGXXPXPPXFFXFWGP 371
P PPP F G P P + GP
Sbjct: 232 PYPPP--PNPQFAIALCLGHGPRSPEYRLSGGP 262
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = -1
Query: 832 GXXPPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXPXXP 665
G PPP P P PPP G P PP P P
Sbjct: 150 GPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPP 205
Score = 28.7 bits (61), Expect(2) = 0.096
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = -3
Query: 572 GKXPPXPPXXXXKKKXXXXXXXXFFSPPXX--GPQKPXAPPXXPKXPFFPPXFXXGXPXP 399
G PP PP SPP GP P PP P PP P P
Sbjct: 162 GGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPPPPPP---PPILELAAPPP 218
Query: 398 P 396
P
Sbjct: 219 P 219
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPP 680
PPP P V P PP GG PPP P PP
Sbjct: 167 PPPIAPAATVPAPAV-----PLAAASPPPPSGGPPPPPPPPPPPPPPP 209
Score = 25.0 bits (52), Expect(2) = 0.096
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -3
Query: 752 PGXPPXXGGXPXXPPXGXXXXXPPXP 675
P P GG P PP PP P
Sbjct: 142 PPIAPATGGPPPPPPIAPATGGPPPP 167
>SB_27357| Best HMM Match : MFMR (HMM E-Value=3.2)
Length = 468
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 35 SLRFLSTMKENYSPIYLTFLTIHQIKRNYNALIRKSKRTLTITVYNSRISCEYVKTVTNV 214
S++ L+T+ +NYS + +LT + +NY+ L SK LT++ S +S Y+ N
Sbjct: 9 SIKVLNTLSKNYSTLSRNYLT---LSKNYSTL---SKNYLTLSKNYSTLSKNYLTLSKNY 62
Query: 215 INKN*KYL 238
+ + YL
Sbjct: 63 LTLSKNYL 70
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 35 SLRFLSTMKENYSPIYLTFLT-----IHQIKRNYNALIRKSKRTLTITVYNSRISCEY 193
S++ L+T+ +NYS + +LT ++ + +NY+ L SK LT++ S +S Y
Sbjct: 80 SIKVLNTLSKNYSTLSKNYLTLSIKVLNTLSKNYSTL---SKNYLTLSKNYSTLSKNY 134
>SB_1509| Best HMM Match : SRR (HMM E-Value=0.22)
Length = 644
Score = 33.5 bits (73), Expect = 0.24
Identities = 21/68 (30%), Positives = 37/68 (54%)
Frame = +2
Query: 35 SLRFLSTMKENYSPIYLTFLTIHQIKRNYNALIRKSKRTLTITVYNSRISCEYVKTVTNV 214
S++ L+T+ +NYS + +LT + +NY+ L SK LT++ S +S Y+ N
Sbjct: 9 SIKVLNTLSKNYSTLSRNYLT---LSKNYSTL---SKNYLTLSKNYSTLSKNYLTLSKNY 62
Query: 215 INKN*KYL 238
+ + YL
Sbjct: 63 LTLSKNYL 70
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Frame = +2
Query: 35 SLRFLSTMKENYSPIYLTFLT-----IHQIKRNYNALIRKSKRTLTITVYNSRISCEYVK 199
S++ L+T+ +NYS + +LT ++ + +NY+ L SK LT++ S +S Y+
Sbjct: 80 SIKVLNTLSKNYSTLSKNYLTLSIKVLNTLSKNYSTL---SKNYLTLSKNYSTLSKNYLT 136
Query: 200 TVTNVINKN*KYL 238
N + YL
Sbjct: 137 LSKNYSTLSKNYL 149
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 33.1 bits (72), Expect = 0.32
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +1
Query: 703 PXGGXXGXPPXXGGXPGXXXCXXXGPXXGXXPXXG-GXXXGXFXXGPPPPXXXXXXXXPP 879
P G PP GG P G P G + GPPPP PP
Sbjct: 23 PPAAPGGYPPAPGGYPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPPPGIAPGIGGPP 82
Query: 880 XGGG-GXPP 903
G G PP
Sbjct: 83 PSGQYGAPP 91
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/106 (25%), Positives = 27/106 (25%)
Frame = -2
Query: 906 PGGXPPPPXGXXXXXXXXXGGGGXXGKXPXXXXPXXGXXXXXXAPXXTXXXPXGXPXXXG 727
PGG PP P G GG G P P P G P G
Sbjct: 27 PGGYPPAPGGYPPAPGGYPPSGG-YGYPPAGGYPPPQPGYAGGPPPPGIAPGIGGPPPSG 85
Query: 726 XPXXPPXGGXGXPXPPXXXXRGXXGXXXXXXXGAPKXXXPPPXGGG 589
PP PP G A PPP G G
Sbjct: 86 QYGAPPT-SQPYGAPPTSGYPGYQQHPPPPQPSAQSYNAPPPAGYG 130
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 32.7 bits (71), Expect = 0.43
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = -3
Query: 908 PXGGXPPPPXGGXXXXXXXXGGGG-PXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXX 732
P G P P GG G P PP G P GP + P PP
Sbjct: 176 PQGQEPYPEKGGYPPAGVGQHSGPYPGQPGMWGPPPMGGPPPMGGPPGG--YPPPPPPPG 233
Query: 731 GGXPXXPP 708
G P PP
Sbjct: 234 AGDPAYPP 241
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 806 PXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXP 675
P G GP Q G PP G P P G PP P
Sbjct: 189 PPAGVGQHSGPYPGQPGMWGPPPMGGPPPMGGPPGGYPPPPPPP 232
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 31.9 bits (69), Expect = 0.75
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Frame = -1
Query: 571 EXPPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFF--PPXXXGXXPXP 398
+ PP PP + P +PP G P PPPF F+ PP G P P
Sbjct: 453 QLPPNLPPPPGGMRGMP-PPPMGMYPPPRGFP----PPPFGPPPPFYRGPPPPRGMPPPP 507
Query: 397 PXFFXFWGP 371
GP
Sbjct: 508 RQRMPSQGP 516
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = -2
Query: 492 PXXGXPKTXXPPXXPXKXXFSPPFXXGXPPPPQXFF 385
P G P+ PP P P G PPPP +
Sbjct: 441 PPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMY 476
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.9 bits (69), Expect = 0.75
Identities = 19/73 (26%), Positives = 20/73 (27%)
Frame = -3
Query: 836 PXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXPXXPGXX 657
P P PP P P Q P PP P PP PP P P
Sbjct: 370 PPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Query: 656 XVXXXGXXXGPPK 618
PP+
Sbjct: 430 PPPALRLACAPPR 442
Score = 31.5 bits (68), Expect = 0.99
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 497 SPPXXGPQKPXAPPXXPKXPFFPPXFXXGXPXPP 396
SPP P P +PP P+ P PP P PP
Sbjct: 377 SPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXPXXP 665
PPP P P P PP PPP P PP P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 565 PPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPP 395
PPP PP P PP P P PPP PP P PP
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPP--PPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXPXXP 665
PPP P P P PP PPP P PP P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 565 PPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPP 395
PPP PP P PP P P PPP PP P PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPP----PPPPPPPPPPPP 418
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -3
Query: 836 PXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXPXXP 666
P P PP P P P PP P PP PP P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXPXXP 665
PPP P P P P PPP P PP P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 31.9 bits (69), Expect = 0.75
Identities = 24/87 (27%), Positives = 25/87 (28%), Gaps = 10/87 (11%)
Frame = -3
Query: 893 PPPPXGGXXXXXXXXGGGGPXXKXPXXX--PPXXGXXPXX--------GPXXXQXFXPGX 744
PPPP G GP P PP G P P Q + P
Sbjct: 118 PPPPYSPIPPQVPYPGAAGPPMPHPTASVYPPPGGYPPTSYPPQPYPAQPYPQQGYPPQP 177
Query: 743 PPXXGGXPXXPPXGXXXXXPPXPXXPG 663
PP P PP G P PG
Sbjct: 178 PPQAYPQPGYPPQGYPPTGPYPQTQPG 204
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +1
Query: 775 GPXXGXXPXXGGXXXGXFXXGPPPPXXXXXXXXPPXGGGGXPP 903
GP P GG G PPP PP GGG PP
Sbjct: 659 GPPPPPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPP 701
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 742 PPXXGGTXXPPPXGXXXPXPPXPXXPGXXGF 650
PP GG PPP PP P PG GF
Sbjct: 681 PPLPGGAAPPPPPPIGGGAPPPPP-PGFGGF 710
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = -2
Query: 723 PXXPPXGGX--GXPXPPXXXXRGXXGXXXXXXXGAPKXXXPPPXGGG 589
P PP GG G P PP G G PPP GG
Sbjct: 663 PPPPPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPPPPGFGG 709
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +2
Query: 797 PXXGXXXXGXXPXXPPP-PXXXXXXXXXPXGGGGXPP 904
P G G P PPP P P GGG PP
Sbjct: 666 PPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPP 702
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 587 PPPPXGGGXXFLGAPXXSXXXKPXXPRXXXXGGXGXPXPPXGGXXGXPXXXG 742
PPPP GG GAP P P G P PP GG P G
Sbjct: 664 PPPPPGGQAG--GAP-------PPPPPPLPGGAAPPPPPPIGGGAPPPPPPG 706
>SB_28644| Best HMM Match : zf-CCCH (HMM E-Value=1.5e-05)
Length = 267
Score = 31.5 bits (68), Expect = 0.99
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 397 GGXGXPXXKXGGKXGFXGXXGGAXGFWGPXXGG 495
GG G GG GF G GG GF G GG
Sbjct: 94 GGGGGGGFGGGGGGGFGGGGGGGGGFGGGGGGG 126
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 31.1 bits (67), Expect = 1.3
Identities = 24/88 (27%), Positives = 25/88 (28%)
Frame = +3
Query: 645 PXNPXXPGXXGXGGXGXXXPXGGGXXVPPXXGGXPXXKXLXXXGPXXGXXTXXXGXXGGG 824
P NP PG G G G PP G P + GP G G
Sbjct: 579 PGNPGGPGYQGNHGNPAGPQGPNGQPGPPGVNGPPG--EIGEIGP-----AGLPGPPGPA 631
Query: 825 FXPXXPPPPXXXXXXXPXXXGGGXXPXG 908
P P PP P G P G
Sbjct: 632 SPPSPPGPPGPPGPKGPPGPNGPLGPPG 659
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 565 PPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPP 395
PPP PP P PP P P PPP PP P PP
Sbjct: 53 PPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAP---PPPPAQPAPQPP 106
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/72 (31%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = -3
Query: 893 PPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXX 714
PPPP G G P P PP P GP P PP G P
Sbjct: 2150 PPPPMG---PARHSPSGPSPLGAPPSVPPPMGA--PPSGPPP-MGAPPSGPPPMGTPPSG 2203
Query: 713 -PPXGXXXXXPP 681
PP G PP
Sbjct: 2204 HPPMGAPPMGPP 2215
Score = 29.5 bits (63), Expect = 4.0
Identities = 25/93 (26%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Frame = -3
Query: 890 PPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXX--PXXGPXXXQXFXPGXPPXXGGXP- 720
PPP G G P PP G GP P PP G P
Sbjct: 2124 PPPMGQYGAPARPAMGPPPMGSSRYGPPPPMGPARHSPSGPSPLGA-PPSVPPPMGAPPS 2182
Query: 719 XXPPXGXXXXXPPXPXXPGXXXVXXXGXXXGPP 621
PP G PP P GPP
Sbjct: 2183 GPPPMGAPPSGPPPMGTPPSGHPPMGAPPMGPP 2215
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Frame = -1
Query: 742 PPXXGGTXXPPPX---GXXXPXPPXPXXPG 662
PP GG PPP G P PP P PG
Sbjct: 655 PPPGGGMFPPPPPPPPGGGVPGPPKPPPPG 684
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 739 PXXGGTXXPPPXGXXXPXPPXPXXPG 662
P GG PPP G P PP P G
Sbjct: 647 PFFGGIPPPPPGGGMFPPPPPPPPGG 672
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = +2
Query: 626 APXXSXXXKPXXPRXXXXGGXGXPXPPXGGXXGXPXXXGXPXGKXFVXXGAXXXXXXPXX 805
AP S P GG P PP GG P G P G P
Sbjct: 581 APTPSYPQPGTYPPPHPSGGYPQPSPPHGGHPHHPPPTGYP-------GGYPGTHTAPPA 633
Query: 806 GXXXXGXXPXXPPPPXXXXXXXXXPXG 886
G G P PPPP P G
Sbjct: 634 GGYPTGQHP--PPPPAGYPGYGPPPAG 658
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/79 (27%), Positives = 22/79 (27%)
Frame = -3
Query: 902 GGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGX 723
G PPPP P P PP P GP P PP G
Sbjct: 343 GVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPP-PPPTNGPP------PPPPPTNGPP 395
Query: 722 PXXPPXGXXXXXPPXPXXP 666
P PP PP P
Sbjct: 396 PPPPPTNGPPPPPPPTNGP 414
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXPXXPGXXGFXG 644
PPP P P P PP G PPP P PP P G G
Sbjct: 365 PPPPPP---TNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPSEGKCG 421
Score = 29.1 bits (62), Expect = 5.3
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 823 PPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXPXXP 665
PPP P P G PP T PPP PP P P
Sbjct: 358 PPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPP 410
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Frame = -1
Query: 850 GGGGXXGXXPP----PXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPX-GXXXPX 686
GGGG PP P P P P K PP G PPP G P
Sbjct: 340 GGGGVNPPPPPTNNPPSPPPPTNNTPPPPPPTNKP-PPPPPPTNGPPPPPPPTNGPPPPP 398
Query: 685 PPXPXXP 665
PP P
Sbjct: 399 PPTNGPP 405
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/59 (30%), Positives = 18/59 (30%)
Frame = -3
Query: 572 GKXPPXPPXXXXKKKXXXXXXXXFFSPPXXGPQKPXAPPXXPKXPFFPPXFXXGXPXPP 396
G PP PP PP KP PP P PP G P PP
Sbjct: 343 GVNPPPPPTNNPPSPPPPTNNTP---PPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPP 398
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -2
Query: 495 PPXXGXPKTXXPPXXPXKXXFSPPFXXGXPPPP 397
PP G PP P PP G PPPP
Sbjct: 1224 PPPMGHHMMNMPPPPPAMPPDGPPKFMGLPPPP 1256
Score = 28.7 bits (61), Expect = 7.0
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -3
Query: 809 PPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXPXXPGXXXVXXXGXXX 630
PP G P P PP G P PP G P P P + G
Sbjct: 1224 PPPMGHHMMNMPPPPPAMPPDGPPKFMGLP-PPPPGMRPMPPQPPFMPPPPRMQPPG-PP 1281
Query: 629 GPP 621
GPP
Sbjct: 1282 GPP 1284
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -2
Query: 747 GXPXXXGXPXXPPXGGXGXPXPPXXXXRGXXGXXXXXXXGAPKXXXPPPXGGG 589
G P G P PP G PP G G P PPP G
Sbjct: 94 GGPPSRGPPRGPPLPGPPRRGPPPDRDSGYGGYGDRYDRPPPDRRPPPPDRSG 146
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = -3
Query: 902 GGXPP--PPXGGXXXXXXXX-GGGGPXXKXPXXXPPXXGXXPXXGP 774
GG PP PP G G GGP + P PP G P GP
Sbjct: 71 GGGPPRGPPRGHPMRGRGAPYGRGGPPSRGPPRGPPLPG-PPRRGP 115
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 30.3 bits (65), Expect = 2.3
Identities = 21/76 (27%), Positives = 21/76 (27%)
Frame = -3
Query: 908 PXGGXPPPPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXG 729
P PPPP G G GP PP P P PP
Sbjct: 1660 PAPPPPPPPAPGPPGPDGPMGLPGPQGPDGPKGPPGPPGLPGPQGIPGYPGAPAGPPGRD 1719
Query: 728 GXPXXPPXGXXXXXPP 681
G P PP PP
Sbjct: 1720 G-PMGPPGPSGGQGPP 1734
>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
Length = 695
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 729 GXPXXPPXGGXGXPXPPXXXXRGXXGXXXXXXXGAPKXXXPPPXGGGG 586
G P PP G G P PP GAP P GG G
Sbjct: 458 GAPPLPPKRGGGPPLPPKRGGGPPLFGAMALRTGAPSKASKPSFGGRG 505
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 29.9 bits (64), Expect = 3.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 494 PPXXGPQKPXAPPXXPKXPFFPPXFXXGXPXPP 396
PP P KP P P P PP P PP
Sbjct: 778 PPPPPPTKPATPRVPPNIPSRPPGARPTPPPPP 810
>SB_6280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.9 bits (64), Expect = 3.0
Identities = 33/130 (25%), Positives = 33/130 (25%), Gaps = 2/130 (1%)
Frame = +1
Query: 394 LGGXGXPXXKXGGKXGFXGXXGGAXGFWGPXXGGEKKXXXXXXXXFFXSXXXGGXGGXFP 573
LGG G G G G GG G G GG GG GG
Sbjct: 241 LGGGGATGGGGGATGGGGGATGGGGGATG---GGGGATGGGGGATGGGGGATGGGGGATG 297
Query: 574 XXKNXXXXXXXXXXXFGGPXXXPXXXTXXXPGXXGXGGXXXXXPXG--GXXGXPPXXGGX 747
GG T G G GG G G G GG
Sbjct: 298 GGGGATGGGGGATGVGGGATGGGGGATGGGVGATGGGGGATGGGGGVTGGGGGATGGGGG 357
Query: 748 PGXXXCXXXG 777
PG C G
Sbjct: 358 PGSGGCGEDG 367
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -3
Query: 497 SPPXXGPQKPXAPPXXPKXPFFPPXFXXGXPXPP 396
+PP P P PP P P PP F P P
Sbjct: 463 APPPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -3
Query: 845 GGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPP 681
G GP P PP P GP F P PP GG P P G PP
Sbjct: 393 GPGPRGMGPGMGPPRPMGPP--GPHGPP-FGPRGPPPHGGPPRG-PMGPGPGMPP 443
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = -3
Query: 752 PGXPPXXGGXPXXPPXGXXXXXPPXPXXPGXXXVXXXGXXXGPP 621
P PP G P PP PP P P G PP
Sbjct: 292 PPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -1
Query: 847 GGGXXGXXPPPXXPXXXVXXPXXGPXXXKXFXXGXPPXXGGTXXPPPXGXXXPXPPXP 674
GGG PPP P P G PP PPP P PP P
Sbjct: 286 GGGAPVPPPPPADGSAPAPPPPPPPG-------GAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = -3
Query: 848 GGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXP 675
GGG P PP G P P PG P P PP G PP P
Sbjct: 286 GGGAPV----PPPPPADGSAPAPPPPP----PPGGAPPPPPPPPPPPPGDGGAPPPPP 335
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 562 PPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPP 395
PP PP P PP G P P PPP PP G P PP
Sbjct: 292 PPPPPADGSAPAPPPP------PPPGGAPPPPPPPPPP------PPGDGGAPPPPP 335
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 495 PPXXGXPKTXXPPXXPXKXXFSPPFXXGXPPPP 397
PP G P PP P PP G PPPP
Sbjct: 308 PPPGGAPPPPPPPPPP------PPGDGGAPPPP 334
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = -1
Query: 565 PPPXPPXXXXKKKXPXXXXXXFFPPXXGXPKNPXPPPFXXKXXFFPPXXXGXXPXPPXFF 386
PP PP P F P P P PP PP P PP
Sbjct: 285 PPMTPPPAVVTAPPPAPPLPNFTSPSPPPPP-PLPPAMPAMDDLLPPEVLSPPPPPPPSE 343
Query: 385 XFW 377
F+
Sbjct: 344 DFY 346
>SB_48709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 931
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = -3
Query: 908 PXGGXPP-PPXGGXXXXXXXXGGGGPXXKXPXXX-PPXXGXXPXXGPXXXQXFXPGXPPX 735
P GG PP PP G P P G P GP PG PP
Sbjct: 224 PPGGPPPFPPTSDPNMGHHPPISGPPTTSMSGPPIPVHHGMPPQYGPGRRDMPPPGAPPG 283
Query: 734 XGGXPXXPPXG 702
P PP G
Sbjct: 284 M-LPPGMPPHG 293
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.7 bits (61), Expect = 7.0
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 2/81 (2%)
Frame = -3
Query: 902 GGXPP--PPXGGXXXXXXXXGGGGPXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXG 729
G PP P G G P P PP P G PG PP
Sbjct: 41 GDRPPNTPIPGDPPPNIPIPGNPPPNTPIPGDPPPNT---PIPGDPPPNTPIPGNPPPNT 97
Query: 728 GXPXXPPXGXXXXXPPXPXXP 666
P PP P P P
Sbjct: 98 PIPGDPPPNTPIPGDPPPNTP 118
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/66 (30%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Frame = -1
Query: 850 GGGGXXGXXPPPXXPXXXVXX--PXXGPXXXKXFXXGXPPXXG--GTXXPPPXGXXXPXP 683
G G G PPP + P GP PP G PPP G P
Sbjct: 378 GAGNGPGGPPPPWSKPGGILPGPPPPGPPMLN-MAPSIPPWQTTPGYIPPPPPGFPQFQP 436
Query: 682 PXPXXP 665
P P P
Sbjct: 437 PPPPPP 442
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 28.3 bits (60), Expect = 9.2
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -3
Query: 836 PXXKXPXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXG--XXXXXPPXPXXPG 663
P + P PP P P Q PG PP P PP G PP PG
Sbjct: 338 PLMQAPQVGPPGNMSMPNHRP---QGLPPGMPPMALSLPGMPPPGLLPPPGMPPRLPIPG 394
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -3
Query: 821 PXXXPPXXGXXPXXGPXXXQXFXPGXPPXXGGXPXXPPXGXXXXXPPXPXXP 666
P PP P G F P PP P PP PP P P
Sbjct: 280 PPPPPPPPSNTP--GMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPPPPP 329
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = -3
Query: 497 SPPXXGPQKPXAPPXXPKXPFFPPXFXXGXPXPP 396
SPP P PP P+ P PP + P P
Sbjct: 337 SPPRYPSSHPRYPPSPPRYPPSPPRYPSSHPRYP 370
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,081,760
Number of Sequences: 59808
Number of extensions: 403347
Number of successful extensions: 2502
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1437
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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