Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G02
         (919 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.1  
Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.      24   5.6  
AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.     24   5.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   7.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 21/79 (26%), Positives = 21/79 (26%), Gaps = 1/79 (1%)
 Frame = -2

Query: 630 GAPKXXXPPPXGGGGVFXXXXXXXXXXXXXXXXXXXPXXXXXFFFPP-XXGXPKTXXPPX 454
           G P    PPP  GG V                    P       FP      P    PP 
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPA 584

Query: 453 XPXKXXFSPPFXXGXPPPP 397
            P      PP   G PP P
Sbjct: 585 PP------PPPPMGPPPSP 597



 Score = 23.8 bits (49), Expect = 7.4
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 774 GPXXGXXTXXXGXXGGGFXPXXPPPP 851
           GP  G         GG   P  PPPP
Sbjct: 511 GPPHGAGYDGRDLTGGPLGPPPPPPP 536



 Score = 23.4 bits (48), Expect = 9.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 908 PXGGXPPPPXGG 873
           P G  PPPP GG
Sbjct: 527 PLGPPPPPPPGG 538


>Y17689-1|CAA76814.1|  111|Anopheles gambiae gSG2 protein protein.
          Length = 111

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 398 GGGGXPXXXGGEKXXFXGKXGGXXVFGXPXXG 493
           GGGG      G+   F G+  G  + G P  G
Sbjct: 29  GGGGYFINGTGQSFNFSGESNGTSIPGLPDFG 60


>AJ130950-1|CAA10259.1|  114|Anopheles gambiae SG2 protein protein.
          Length = 114

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +2

Query: 398 GGGGXPXXXGGEKXXFXGKXGGXXVFGXPXXG 493
           GGGG      G+   F G+  G  + G P  G
Sbjct: 29  GGGGYFINGTGQSFNFSGESNGTSIPGLPDFG 60


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 663 PGXXGXGGXGXXXPXGGGXXVPPXXGG 743
           PG  G G  G     GGG    P  GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGG 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,128
Number of Sequences: 2352
Number of extensions: 13255
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)