Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_G01
         (928 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-P...    57   4e-08
AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-P...    42   0.002
AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    29   9.0  
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    29   9.0  
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    29   9.0  

>AE014296-3572|AAS65091.1|  171|Drosophila melanogaster CG33290-PA
           protein.
          Length = 171

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
 Frame = +3

Query: 246 PYAG--RQPIGFPAIQSTAPPE-----DALGNRFGDDISTT--TIRLPIEALGXADLVXR 398
           PY    R P+G P +  +AP E       + N  G    T     RLPI+A G  D V R
Sbjct: 70  PYGAPQRPPMGVPLVHPSAPEELLASYSPVNNAAGFPAQTAPDNSRLPIDARGDRDWVNR 129

Query: 399 LXXLPVXKQXFWXLXWXXLEANRKNPQ----NFNQRPNSF 506
           L  LPV +Q FW + +  +EA R NP+    N+  R NSF
Sbjct: 130 LKQLPVDQQPFWLVNYQAIEAMRNNPRPNVGNYEWRGNSF 169


>AE014296-3612|AAF51775.1|  190|Drosophila melanogaster CG14567-PA
           protein.
          Length = 190

 Score = 41.5 bits (93), Expect = 0.002
 Identities = 20/63 (31%), Positives = 32/63 (50%)
 Frame = +3

Query: 285 QSTAPPEDALGNRFGDDISTTTIRLPIEALGXADLVXRLXXLPVXKQXFWXLXWXXLEAN 464
           Q T  P  +   R    ++    +LPI+A G  + V  L  LPV +Q FW + +  +EA+
Sbjct: 111 QFTTQPTSSTAGRPATSVAPVFNQLPIDAHGDREWVNHLSQLPVEQQPFWFINYQAIEAH 170

Query: 465 RKN 473
           R +
Sbjct: 171 RNS 173


>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p
           protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 17/64 (26%), Positives = 18/64 (28%)
 Frame = +1

Query: 685 PCSXVPATXXXXPPPGPXPXXGXXPXXXXPXXXXPPXXXXXXXAXXXXXPPXPXPXXLXX 864
           P    P T    PPP P P     P    P    PP             PP P P  +  
Sbjct: 140 PPPPAPPTLVPPPPPAP-PTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEP 198

Query: 865 XXXP 876
              P
Sbjct: 199 PPPP 202


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
           isoform A protein.
          Length = 1109

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 17/64 (26%), Positives = 18/64 (28%)
 Frame = +1

Query: 685 PCSXVPATXXXXPPPGPXPXXGXXPXXXXPXXXXPPXXXXXXXAXXXXXPPXPXPXXLXX 864
           P    P T    PPP P P     P    P    PP             PP P P  +  
Sbjct: 403 PPPPAPPTLVPPPPPAP-PTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEP 461

Query: 865 XXXP 876
              P
Sbjct: 462 PPPP 465


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
           isoform B protein.
          Length = 1150

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 17/64 (26%), Positives = 18/64 (28%)
 Frame = +1

Query: 685 PCSXVPATXXXXPPPGPXPXXGXXPXXXXPXXXXPPXXXXXXXAXXXXXPPXPXPXXLXX 864
           P    P T    PPP P P     P    P    PP             PP P P  +  
Sbjct: 403 PPPPAPPTLVPPPPPAP-PTIKPPPPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEP 461

Query: 865 XXXP 876
              P
Sbjct: 462 PPPP 465


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,298,019
Number of Sequences: 53049
Number of extensions: 492928
Number of successful extensions: 1171
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)