Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_F23
(971 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.009
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.14
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.25
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.32
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.43
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.80
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.99
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.99
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 29 0.99
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.3
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 27 4.0
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.0
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.3 bits (85), Expect = 0.002
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1
Query: 968 PGGGGGXXGGXGGGXGGXXGGKEGF 894
PGG GG GG GGG GG GG GF
Sbjct: 237 PGGFGGGPGGFGGGLGGFGGGPGGF 261
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/30 (53%), Positives = 16/30 (53%)
Frame = -1
Query: 968 PGGGGGXXGGXGGGXGGXXGGKEGFCXEVW 879
PGG GG GG GGG GG GG G W
Sbjct: 244 PGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 34.7 bits (76), Expect = 0.020
Identities = 15/25 (60%), Positives = 15/25 (60%)
Frame = -1
Query: 968 PGGGGGXXGGXGGGXGGXXGGKEGF 894
PGG G GG GGG GG GG GF
Sbjct: 230 PGGFEGGPGGFGGGPGGFGGGLGGF 254
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGGXXGGKEGF 894
G GG GG GGG GG G GF
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGF 207
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGGXXGGKEGF 894
GGG G GG GG GG GF
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGF 210
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +1
Query: 901 SFPPXXPPXPPPXP----PXXPPPPP 966
S PP PP PPP P P PPPPP
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.7 bits (66), Expect = 0.32
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 907 PPXXPPX--PPPXPPXXPPPPPG 969
PP PP PP PP PPPPPG
Sbjct: 11 PPPPPPGFEPPSQPP--PPPPPG 31
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGGXXGGKEG 897
G GGG G GGG GG GG+ G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGG 49
Score = 29.9 bits (64), Expect = 0.57
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGGXXGGKEG 897
GG G GG GG GG GG+ G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGG 34
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGGXXGGKEG 897
GGG G G GG GG GG+ G
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGG 59
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGG-XXGGKEG 897
GG G GG GGG GG GG+ G
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGG 42
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGGXXGG 906
GG G GG GG GG GG
Sbjct: 51 GGARGGRGGSSGGRGGAKGG 70
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 965 GGGGGXXGGXGGGXGGXXGGKEG 897
GG G GG GG GG G G
Sbjct: 41 GGARGGRGGRGGARGGRGGSSGG 63
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 4/28 (14%)
Frame = +1
Query: 898 PSFPPXXPPXPPPXP----PXXPPPPPG 969
P+ P P PPP P P PPPPPG
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 29.1 bits (62), Expect = 0.99
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Frame = +1
Query: 907 PPXXPPXPPPX-----PPXXPPPPP 966
PP PP PPP PP PPPPP
Sbjct: 761 PP--PPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.32
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 898 PSFPPXXPPXPPPXPPXXPPPPP 966
PS PP PP P P PP PP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPP 451
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +1
Query: 898 PSFPPXXP---PXPPPXPPXXPPPPP 966
PS PP P P PP PP P PP
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 910 PXXPPXPPPXPPXXPPPPP 966
P P PP PP P PPP
Sbjct: 460 PAGMPAAPPLPPAAPAPPP 478
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 898 PSFPPXXPPXPPPXPPXXPPPPP 966
PS PP PP PP P P P
Sbjct: 425 PSAPPSLPPSAPPSLPMGAPAAP 447
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +1
Query: 898 PSFPPXXPPXPP--PXPPXXPPPPP 966
P+ P PP PP P PP P P P
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +1
Query: 880 QTSXQKPSFPPXXPP-XPPPXPPXXPPPPP 966
+TS PP PP PP PP PP P
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Frame = +1
Query: 898 PSFPPXXP--PXPPPXPPXXPPPP 963
P+ PP P P PPP P P P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAAP 487
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.43
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +1
Query: 859 PXKVLSXQTSXQ-KPSFPPXXPPXPPPXPPXXPPPP 963
P L TS +PS PP P PP P PP P
Sbjct: 133 PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 30.3 bits (65), Expect = 0.43
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 892 QKPSFPPXXPPXPPPXPPXXPPPP 963
+ P P P PP PP PPPP
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 895 KPSFPPXXPPXPPPXPPXXPPPPP 966
+P+ P PP P P PP PP
Sbjct: 176 QPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Frame = +1
Query: 907 PPXXPPXPPPXPPXXP--PPPP 966
PP P P PP P PPPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +1
Query: 859 PXKVLSXQTSXQKPSFPPXXPPXPPPXPPXXPPPPP 966
P ++S S Q PS P P PPPPP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 898 PSFPPXXPPXPPPXPPXXPPPPP 966
P PP P P PPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPP 243
Score = 24.2 bits (50), Expect(2) = 0.80
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 928 PPPXPPXXPPPPP 966
PPP P PP PP
Sbjct: 274 PPPATPSQPPRPP 286
Score = 23.4 bits (48), Expect(2) = 0.80
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 883 TSXQKPSFPPXXPPXPPPXPP 945
T Q P PP PP PP
Sbjct: 228 TPKQADPLPAPPPPPPPTLPP 248
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.1 bits (62), Expect = 0.99
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 905 SPXPPXPXPXPXXPXXPPPP 964
+P PP P P P PPPP
Sbjct: 728 TPAPPTPAPTPAVKHHPPPP 747
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +1
Query: 895 KPSFPPXXP-PXPPPXPPXXPPPPP 966
KP P P P P P PPPPP
Sbjct: 724 KPQVTPAPPTPAPTPAVKHHPPPPP 748
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.99
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 968 PGGGGGXXGGXGG-GXGGXXGGKEGF 894
P GGG GG GG G G GG+ GF
Sbjct: 443 PRTGGGSRGGRGGFGGRGGFGGRGGF 468
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 29.1 bits (62), Expect = 0.99
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 898 PSFPPXXPPXPPPXPPXXPPPPPG 969
P+ P P P P PPPPPG
Sbjct: 272 PAMPMMNVPMGPGGAPLVPPPPPG 295
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 859 PXKVLSXQTSXQKPSFPPXXPPXPPPXPPXXPPPP 963
P Q S P PP P PP PP PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 907 PPXXPPXPPPXPPXXPPPP 963
PP P P PP PPPP
Sbjct: 1716 PPPSAPPMPAGPPSAPPPP 1734
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 907 PPXXPPXPPPXPPXXPPPPP 966
PP PP PP PPPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPP 1718
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Frame = +1
Query: 886 SXQKPSFPPXXPPXPP---PXPPXXPPPPPG 969
S P PP PP P PP PP P G
Sbjct: 1696 SAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG 1726
Score = 25.8 bits (54), Expect = 9.2
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 859 PXKVLSXQTSXQKPSFPPXXPPXPPPXPPXXPPPPPG 969
P V ++ P+ PP PP P P P PG
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 965 GGGGGXXGGXGGGX-GGXXGGKEG 897
G GGG GG GGG GG GG G
Sbjct: 161 GFGGGSRGGFGGGSRGGSRGGFRG 184
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -1
Query: 965 GGGGGXXGGXGGGX-GGXXGGKEG 897
GG GG GG GG GG GG G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRG 168
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -1
Query: 965 GGGGGXXGGXGGG-XGGXXGGKEG 897
G GG GG GGG GG GG G
Sbjct: 153 GFGGNSRGGFGGGSRGGFGGGSRG 176
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +1
Query: 865 KVLSXQTSXQKPSFPPXXPPXPPPXPPXXPPPP 963
+++ T+ Q P PP P P PPPP
Sbjct: 200 RIIKMVTAEQDPMEPPKFRHKKVPRGPPSPPPP 232
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 874 SXQTSXQKPSFPPXXPPXPPPXPPXXPPPPP 966
S ++ KPS P P P PPPPP
Sbjct: 1072 SSPSNISKPSAPVANNVSKPSAVPPPPPPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,747,831
Number of Sequences: 5004
Number of extensions: 44352
Number of successful extensions: 382
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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