Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F21
         (945 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.27 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 0.27
 Identities = 19/64 (29%), Positives = 19/64 (29%)
 Frame = -1

Query: 939 GGGVXXXGGGWGPPXPXXXGGAXPQGXXXXXXXGXXGGXGXXGXXGGXVXKIFGVPXXGG 760
           GGG    GGG              Q        G  GG    G  GG      G    GG
Sbjct: 168 GGGGGGGGGGGAGSFAAALRNLAKQADVKEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227

Query: 759 GXGG 748
           G GG
Sbjct: 228 GGGG 231


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/50 (28%), Positives = 15/50 (30%)
 Frame = +2

Query: 683 NPXXPKIPXXFXPXXPXNXXRFPPXPPPXXGTPKIFXTXPPXXPXXPXPP 832
           NP   + P  F           PP PPP    P      P   P    PP
Sbjct: 563 NPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 23.8 bits (49), Expect = 7.7
 Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
 Frame = +2

Query: 701 IPXXFXPXXPXNXXRFP--PXPPPXX----GTPKIFXTXPPXXPXXPXPPXXPXXXXXCX 862
           IP  F P  P N  R P  P  P       G P +    PP  P  P P   P       
Sbjct: 543 IPPQFLPP-PLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGG 601

Query: 863 PWG 871
           P G
Sbjct: 602 PLG 604


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,605
Number of Sequences: 2352
Number of extensions: 5254
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)