Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F19
         (1061 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical pr...    51   1e-06
L16622-5|ABC71836.1|  263|Caenorhabditis elegans Hypothetical pr...    49   5e-06
L16622-4|AAA27914.1|  323|Caenorhabditis elegans Hypothetical pr...    49   5e-06
Z32683-12|CAA83624.2|  186|Caenorhabditis elegans Hypothetical p...    43   4e-04
AF077534-7|AAK71376.1|  319|Caenorhabditis elegans Prion-like-(q...    42   6e-04
Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical pr...    39   0.005
Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ...    30   3.2  
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical...    30   3.2  
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    29   7.4  
AL034393-2|CAA22309.1|  220|Caenorhabditis elegans Hypothetical ...    29   7.4  

>Z81534-4|CAB04345.1|  277|Caenorhabditis elegans Hypothetical
           protein F37H8.5 protein.
          Length = 277

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +2

Query: 302 SLCPGCRVFDSEILXPTI-ERLNQYLNINIYPYGKAQTIEKNGKYEFICQHGPEECYGNK 478
           +LCP C+ F ++ L P + +    Y+NI + P+G A+ +E +G  +  CQHG EEC  NK
Sbjct: 84  ALCPDCQNFLTKQLYPIVFKNFANYVNIELVPFGNAKVLE-DGTIK--CQHGEEECSINK 140

Query: 479 LHAC 490
              C
Sbjct: 141 FEGC 144


>L16622-5|ABC71836.1|  263|Caenorhabditis elegans Hypothetical
           protein C02D5.2b protein.
          Length = 263

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +2

Query: 359 RLNQYLNINIYPYGKAQTIEKNGKYEFICQHGPEECYGNKLHAC 490
           RLN+ + +N+ P+GKA+  EK   +E  CQHGP EC  N+L  C
Sbjct: 109 RLNR-IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNC 151


>L16622-4|AAA27914.1|  323|Caenorhabditis elegans Hypothetical
           protein C02D5.2a protein.
          Length = 323

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +2

Query: 359 RLNQYLNINIYPYGKAQTIEKNGKYEFICQHGPEECYGNKLHAC 490
           RLN+ + +N+ P+GKA+  EK   +E  CQHGP EC  N+L  C
Sbjct: 169 RLNR-IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNC 211


>Z32683-12|CAA83624.2|  186|Caenorhabditis elegans Hypothetical
           protein R07E5.4 protein.
          Length = 186

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 302 SLCPGCRVFDSEILXPTIERLNQYLNINIYPYGKAQ-TIEKNGKYEFICQHGPEECYGNK 478
           S CP C     E + P        +N+ I P+GK   T + N  +   C HG  EC  N+
Sbjct: 27  SQCPYCTKLLREQIWPFYVNRPGIMNLQIVPFGKGDCTYDYNRNFHCTCMHGATECDLNR 86

Query: 479 LHACA 493
           L  CA
Sbjct: 87  LQNCA 91


>AF077534-7|AAK71376.1|  319|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 48
           protein.
          Length = 319

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 20/63 (31%), Positives = 34/63 (53%)
 Frame = +2

Query: 302 SLCPGCRVFDSEILXPTIERLNQYLNINIYPYGKAQTIEKNGKYEFICQHGPEECYGNKL 481
           +LCP C+ F +  L     +    L + + P+G ++ I ++G   F C HG +EC  N+L
Sbjct: 149 ALCPYCQKFIANQLGSVFNQFQGQLILELVPWGNSR-IMRDGS--FSCNHGQKECDANRL 205

Query: 482 HAC 490
            +C
Sbjct: 206 QSC 208


>Z37093-1|CAA85467.1|  264|Caenorhabditis elegans Hypothetical
           protein ZK669.2 protein.
          Length = 264

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
 Frame = +2

Query: 221 LESDTYLMADKIXXXXXXXXXXXXXXXSLCPGC-RVFDSEILXP-TIERLNQYLNINIYP 394
           LE    +MAD+                SLCP   R F + I+   T  + +  +NI  +P
Sbjct: 55  LEIYKAMMADQASRAKTPPINIEFFGESLCPDTTRYFRNHIMPVWTSLQASSTINITYHP 114

Query: 395 YGKAQTIEK-NGKYEFICQHGPEECYGNKLHACA-STL 502
           +G A             CQHGP EC  N L AC  STL
Sbjct: 115 FGLASCRRSAETGIRCNCQHGPAECQLNMLQACVISTL 152


>Z37093-2|CAA85464.1|  218|Caenorhabditis elegans Hypothetical
           protein ZK669.3 protein.
          Length = 218

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +2

Query: 374 LNINIYPYG-KAQTIEKNGKYEFICQ--HGPEECYGNKLHAC 490
           +N + +PYG K   ++     + +C   HG  EC  N+L AC
Sbjct: 65  INFDYHPYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQAC 106


>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = -1

Query: 362 IFQLLVXISRSRTLYSQDTRIRNIPLHLLFHQHTVVFYQPLNMCLIPTG*IAFDQFLSNS 183
           IF+ +  +  S  + ++D  I    LH L +  +VV Y+P+   L+  G      FL+  
Sbjct: 91  IFEFIHRVMGSNIVLNKDPLINAQTLHDLLYMTSVVVYEPVFKWLVDAG---VKVFLNTD 147

Query: 182 RQYILLVL*LKRSNTE-PRILCWT 114
           R+ +L     +  NT+   + CW+
Sbjct: 148 RKLLL----EEHMNTDHSHVHCWS 167


>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
           protein Y57A10A.1 protein.
          Length = 1342

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = -1

Query: 362 IFQLLVXISRSRTLYSQDTRIRNIPLHLLFHQHTVVFYQPLNMCLIPTG*IAFDQFLSNS 183
           IF+ +  +  S  + ++D  I    LH L +  +VV Y+P+   L+  G      FL+  
Sbjct: 91  IFEFIHRVMGSNIVLNKDPLINAQTLHDLLYMTSVVVYEPVFKWLVDAG---VKVFLNTD 147

Query: 182 RQYILLVL*LKRSNTE-PRILCWT 114
           R+ +L     +  NT+   + CW+
Sbjct: 148 RKLLL----EEHMNTDHSHVHCWS 167


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
           protein F37A4.4 protein.
          Length = 1163

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 365 NQYLNINIYPYGKAQTIEKNGKY 433
           NQY+N+ +Y +GK    EK  +Y
Sbjct: 793 NQYINLYLYYFGKTSDYEKRWRY 815


>AL034393-2|CAA22309.1|  220|Caenorhabditis elegans Hypothetical
           protein Y18D10A.2 protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 374 LNINIYPYGKAQTIEKNGKYEFICQHGPEECYGNKLHACA 493
           L+ +  P G  Q    +GKY   C HG  EC  NKL  C+
Sbjct: 75  LDFHAVPTGGHQV---DGKYVNRCLHGALECALNKLQMCS 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,106,904
Number of Sequences: 27780
Number of extensions: 204873
Number of successful extensions: 488
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2835266498
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)