Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F18
         (1013 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1174 - 26696869-26698191                                         32   0.84 
08_01_0059 - 394001-394708                                             31   1.1  
02_05_0149 + 26290236-26290880                                         31   1.9  
09_02_0543 + 10427321-10428315,10428440-10429154                       30   2.6  
08_01_0493 - 4297761-4298288                                           29   4.5  
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141...    29   4.5  
04_04_0053 + 22389227-22389613,22390528-22390981,22391618-223916...    29   4.5  
04_03_0904 + 20717005-20718087                                         29   7.8  
04_03_0558 + 17111138-17111996,17112474-17112564,17112647-171132...    29   7.8  

>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.9 bits (69), Expect = 0.84
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +2

Query: 869  PXAXXPLXXPPSPTXAXHNLSPPXHARSFSLXPPPTRXXXPHPSP 1003
            P A  P+  PP P      + PP         PPP+    P P P
Sbjct: 116  PPALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPP 160


>08_01_0059 - 394001-394708
          Length = 235

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +2

Query: 869  PXAXXPLXXPPSPTXAXHNLSPPXHARSFSLXPPPTRXXXPHPSP 1003
            P    P+  PP PT   +   PP H     L PPP     P P P
Sbjct: 26   PPPSPPIRPPPPPTPRPYAPPPPSH----PLAPPPPHISPPAPVP 66


>02_05_0149 + 26290236-26290880
          Length = 214

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = -2

Query: 772 GGGGARGGXXXXXXXXXXXXXXXXXGGFVGXGGGGXXXVGXN 647
           GGGG  GG                 GGF G GGGG    G N
Sbjct: 103 GGGGGGGGGGSGRAYGFGGGYGGHPGGFGGGGGGGGGGGGRN 144


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/46 (34%), Positives = 16/46 (34%)
 Frame = +2

Query: 869  PXAXXPLXXPPSPTXAXHNLSPPXHARSFSLXPPPTRXXXPHPSPG 1006
            P    P   PP P        PP  A   S  PPP     P P PG
Sbjct: 26   PPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPG 71


>08_01_0493 - 4297761-4298288
          Length = 175

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 905  PTXAXHNLSPPXHARSFSLXPPPTRXXXPHPSP 1003
            P    H+ SPP HA S ++ PPP     P PSP
Sbjct: 96   PDMHHHHPSPPQHALSPAVPPPP---PPPPPSP 125


>07_03_1182 -
           24610862-24611637,24612223-24612340,24612441-24614120,
           24614253-24614320,24615370-24615550
          Length = 940

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 15/55 (27%), Positives = 25/55 (45%)
 Frame = -3

Query: 213 LGSGAALTAPRASTNAKTKLKIRTKFILPKFYSAGRIQNSKYNIVXRRTGXNDQN 49
           L  G   T PR+S+N   +    +K +L K +S    +NS  +I   R   +  +
Sbjct: 56  LPPGPGHTLPRSSSNVAAQSSSTSKIVLEKTFSKSMTENSSLSIESSRASCSSSS 110


>04_04_0053 +
           22389227-22389613,22390528-22390981,22391618-22391673,
           22391757-22391887,22391976-22392072,22393329-22393484
          Length = 426

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 884 PLXXPPSPTXAXHNLSPPXHARSFSLXPPP 973
           P   PP P  A     PP +A+ F+  PPP
Sbjct: 49  PYPPPPPPMVAAPPPPPPQYAKHFAAGPPP 78


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
 Frame = +2

Query: 869  PXAXXPLXXPPSPTXAXHNLSPPXHARSFSLXP-PPTRXXXPHPSP 1003
            P    P   PP PT   +   P      ++  P PPT    P P+P
Sbjct: 109  PPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPTP 154


>04_03_0558 +
           17111138-17111996,17112474-17112564,17112647-17113268,
           17113378-17113457,17113871-17113937,17114138-17114263,
           17114333-17114415,17115334-17115777,17115834-17115927,
           17116038-17116124,17116474-17116594,17116671-17116709,
           17116828-17116997
          Length = 960

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 186 PRASTNAKTKLKIRTKFILPKFYSAGRIQNSKYN 85
           PRA  N K ++     F +    S+GR QNSK++
Sbjct: 546 PRAKANYKARMGATPSFAIISGVSSGRQQNSKFS 579


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,756,996
Number of Sequences: 37544
Number of extensions: 317803
Number of successful extensions: 1218
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2987258700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)