Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F18
         (1013 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084165-1|AAL89903.1|  525|Drosophila melanogaster RE39081p pro...    31   2.5  
AE014296-1347|AAF50503.1|  525|Drosophila melanogaster CG8254-PA...    31   2.5  

>AY084165-1|AAL89903.1|  525|Drosophila melanogaster RE39081p protein.
          Length = 525

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +2

Query: 884  PLXXPPSP--TXAXHNLSPPXHARSF-SLXPPPTRXXXPHPSPG 1006
            PL   P P  T   H+  PP H R +    PPP     PHP+ G
Sbjct: 117  PLLVAPMPVGTGPPHSHPPPPHPRLYVEGFPPPHHVPHPHPALG 160


>AE014296-1347|AAF50503.1|  525|Drosophila melanogaster CG8254-PA
            protein.
          Length = 525

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
 Frame = +2

Query: 884  PLXXPPSP--TXAXHNLSPPXHARSF-SLXPPPTRXXXPHPSPG 1006
            PL   P P  T   H+  PP H R +    PPP     PHP+ G
Sbjct: 117  PLLVAPMPVGTGPPHSHPPPPHPRLYVEGFPPPHHVPHPHPALG 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,822,415
Number of Sequences: 53049
Number of extensions: 500574
Number of successful extensions: 1950
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5160759156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)