Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F16
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    29   3.8  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.0  
01_01_1215 + 9815918-9816218,9816772-9816912,9816988-9817106,981...    29   5.0  
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129...    29   6.6  
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699...    29   6.6  
03_05_0269 - 22545925-22546554,22546663-22547010,22547447-22547797     29   6.6  
02_01_0468 + 3357043-3357226,3357695-3358155                           29   6.6  

>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/44 (31%), Positives = 18/44 (40%)
 Frame = +2

Query: 752  PXXPXPSLPXXVSGXRGXVGGXFXSSXXXPPPPXXXXSLXGXPF 883
            P  P P +P  V+      GG    S   PPPP    ++   PF
Sbjct: 935  PPAPLPFIPSSVTPLTQFPGGSAQQSEKRPPPPPPPPNVAPPPF 978


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
 Frame = +2

Query: 743 PPXPXXPXPSLPXXV--SGXRGXVGGXFXSSXXXPPPP 850
           PP P  P PSLP  +        +G  F +    PPPP
Sbjct: 635 PPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPP 672


>01_01_1215 +
           9815918-9816218,9816772-9816912,9816988-9817106,
           9817922-9818191,9818330-9818369,9818519-9818616,
           9818745-9818825
          Length = 349

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
 Frame = +3

Query: 288 SRARFQLSGNSGRKHSRCCTS-ILRKLVAGSIVSQLTAAAMVAPTP*GD 431
           S++   LS  +GRK  R C+  ++R   + SI + LT+AA+V P P GD
Sbjct: 137 SQSIVSLSSFAGRKRIRVCSGFVIRWNDSTSIGTILTSAALVRP-PCGD 184


>12_01_0173 -
           1292164-1293036,1294063-1294098,1294195-1294334,
           1295592-1295748,1295862-1296035,1296146-1296396,
           1299446-1299590
          Length = 591

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
 Frame = +2

Query: 737 FXPPXPXXPXPSLPXXVSGXRGXVG-GXFX--SSXXXPPPPXXXXSLXGXP-FXFPP 895
           F PP P  P P +P  V    G  G G F   S    PPPP       G P    PP
Sbjct: 482 FPPPPP--PLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPPPLPNIMSAGFPRLSVPP 536


>05_07_0200 -
           28368890-28369021,28369169-28369303,28369918-28369947,
           28370019-28370093,28370222-28370333,28370440-28370621,
           28370723-28370854,28372193-28373479
          Length = 694

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +2

Query: 731 PPFXPPXPXXPXPSLPXXVSGXRGXVGGXFXSSXXXPPPP 850
           PP  PP P  P P +P   S           S+    PPP
Sbjct: 305 PPIPPPPPPPPPPPMPRSRSASPSPSTSSSGSAGPPAPPP 344


>03_05_0269 - 22545925-22546554,22546663-22547010,22547447-22547797
          Length = 442

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = -2

Query: 846 GGGXXXXEXXXPPTXPRXPETXXGSDGXGXXGXGGLKGG 730
           GGG    E   P      PE+  G  G G  G GG  GG
Sbjct: 5   GGGGGGGEMLAPLMEGPDPESGDGEGGGGGGGGGGGGGG 43


>02_01_0468 + 3357043-3357226,3357695-3358155
          Length = 214

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = -2

Query: 849 GGGGXXXXEXXXPPTXPRXPETXXGSDGXGXXGXGGLKGG 730
           GGGG        PP  P  P     S   G    GG K G
Sbjct: 150 GGGGGGAPAGQAPPGAPATPAGTNSSPANGGAAGGGAKSG 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,917,618
Number of Sequences: 37544
Number of extensions: 352776
Number of successful extensions: 972
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)