Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F14
         (919 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110501-9|CAB54507.2|  802|Caenorhabditis elegans Hypothetical ...    29   4.7  
AL033514-40|CAD36501.1|  802|Caenorhabditis elegans Hypothetical...    29   4.7  
AJ319870-1|CAC67459.1|  802|Caenorhabditis elegans ZYG-8 protein...    29   4.7  
Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z70212-1|CAA94162.1|  406|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z66567-3|CAA91489.1|  444|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>AL110501-9|CAB54507.2|  802|Caenorhabditis elegans Hypothetical
           protein Y79H2A.11 protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 170 DADPRETQWDCIRPGTKWHWFSSGATPHKHVTTRNTMTDQMPKS 39
           D DP   +W      +K H      TP+++ T+R T  D++ +S
Sbjct: 748 DVDPEYEEWAHRFVQSKMHVEEEQETPYEYYTSRRTSMDELSES 791


>AL033514-40|CAD36501.1|  802|Caenorhabditis elegans Hypothetical
           protein Y79H2A.11 protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 170 DADPRETQWDCIRPGTKWHWFSSGATPHKHVTTRNTMTDQMPKS 39
           D DP   +W      +K H      TP+++ T+R T  D++ +S
Sbjct: 748 DVDPEYEEWAHRFVQSKMHVEEEQETPYEYYTSRRTSMDELSES 791


>AJ319870-1|CAC67459.1|  802|Caenorhabditis elegans ZYG-8 protein
           protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -3

Query: 170 DADPRETQWDCIRPGTKWHWFSSGATPHKHVTTRNTMTDQMPKS 39
           D DP   +W      +K H      TP+++ T+R T  D++ +S
Sbjct: 748 DVDPEYEEWAHRFVQSKMHVEEEQETPYEYYTSRRTSMDELSES 791


>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 180 PSWSPLGRGCCQLQNGFVERYHVPIYLVLSNC 275
           P +SP G G C  QN ++   H+  +L    C
Sbjct: 429 PHYSPKGNGICSRQNRWIFHQHLRFHLDFVRC 460


>Z70212-1|CAA94162.1|  406|Caenorhabditis elegans Hypothetical
           protein R04D3.2 protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -1

Query: 178 GRRMQTHAKRNGTVSDLAQNGTGLVPEL 95
           G+R++ HA+  GTV    QN TG+V  L
Sbjct: 90  GQRLRAHAELGGTVLVTEQNLTGVVESL 117


>Z66567-3|CAA91489.1|  444|Caenorhabditis elegans Hypothetical
           protein ZK455.3 protein.
          Length = 444

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 98  LRN*TSAILCQVGYSPIAFRVGLHPSAAILVAAGAWLLPATKWVCRTVS 244
           +RN T+ ++  +  S + F +   P  A+  AA  W+ P  +W C  ++
Sbjct: 73  MRNSTNTLIIGLAISDLMFLLLCVPFTAVDYAAPTWIFP--EWTCSMIN 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,394,267
Number of Sequences: 27780
Number of extensions: 236726
Number of successful extensions: 513
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)