Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F12
         (1060 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           33   0.38 
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996...    29   8.2  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   8.2  
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54...    29   8.2  

>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 33.1 bits (72), Expect = 0.38
 Identities = 17/53 (32%), Positives = 18/53 (33%)
 Frame = +2

Query: 542 PPXLSAXPXRRXXPXXEPWPSXXXXXLGXPXXPQVCRPPSNXPXXXAPXPPTP 700
           PP   A P     P   P PS      G P  P    P +  P    P PP P
Sbjct: 321 PPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPP 373


>10_06_0039 -
           9966744-9967535,9968241-9968482,9969021-9969223,
           9969333-9970645
          Length = 849

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 24/93 (25%), Positives = 29/93 (31%)
 Frame = +2

Query: 542 PPXLSAXPXRRXXPXXEPWPSXXXXXLGXPXXPQVCRPPSNXPXXXAPXPPTPRKTXXLP 721
           PP     P  R  P    + +      G     Q+  PPSN P    P PP P +     
Sbjct: 290 PPPAPPAPRSRRTPPRTRFSAGS----GAEMNKQMASPPSNPPPAPPPPPPPPSRFNNTT 345

Query: 722 XXSHSXPSHPXLXXNAXXTLXLXLLPXXSLGPS 820
                 P  P           L L P  + GPS
Sbjct: 346 PKPPPPPPPPEPPTGPVSARRL-LRPLPAEGPS 377


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = +2

Query: 581 PXXEPWPSXXXXXLGXPXXPQVCRPPS-NXPXXXAPXPPTPRKTXXLPXXSHSXPSHP 751
           P     PS        P  P    PPS N P    P PP P     LP  +++    P
Sbjct: 529 PSDRKLPSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPP 586


>02_01_0077 -
           546033-546223,546314-546566,546635-546865,547165-547331,
           547369-548008
          Length = 493

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 14/38 (36%), Positives = 15/38 (39%)
 Frame = +2

Query: 629 PXXPQVCRPPSNXPXXXAPXPPTPRKTXXLPXXSHSXP 742
           P  P    PPS  P    P PPTP +    P  S   P
Sbjct: 59  PEPPLPDSPPSQEPDTPEPAPPTPPQQQQQPWQSPLPP 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,764,476
Number of Sequences: 37544
Number of extensions: 124997
Number of successful extensions: 659
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3141165724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)