Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_F12
         (1060 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    31   0.058
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.6  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 31.1 bits (67), Expect = 0.058
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 750 GXEGXEWEXXGRXXVFRGVGGXGAXXXGXLDGG 652
           G +G E+E  GR  V  G+GG G    G   GG
Sbjct: 541 GSDGPEYEGAGRGGVGSGIGGGGGGGGGGRAGG 573


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 15/53 (28%), Positives = 19/53 (35%)
 Frame = +2

Query: 599 PSXXXXXLGXPXXPQVCRPPSNXPXXXAPXPPTPRKTXXLPXXSHSXPSHPXL 757
           P+      G P  P    PP+  P      PP+P     L   + S P  P L
Sbjct: 564 PAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNL 616


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.6
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = +2

Query: 623 GXPXXPQVCRPPSN--XPXXXAPXPPTP 700
           G P  PQ+ RPP N   P    P  P P
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTGTPTQPQP 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,784
Number of Sequences: 2352
Number of extensions: 2488
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 117985413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)